MC09g0889 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0889
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionFormin-like protein 4 isoform X2
LocationMC09: 11773304 .. 11773449 (-)
RNA-Seq ExpressionMC09g0889
SyntenyMC09g0889
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGAGGATGGCAAGCCAGTTTGTAGGCATAGTTCGAATTGGTATCTCAAATTGGGGTCTGCGTGCGGTCAATCATTCCTCTGAACTCTGAAAATTGGTCAGATGTCAACCAAGACGATAAAAATGATATCATAAATAGACTT

mRNA sequence

GAAGAAGAGGATGGCAAGCCAGTTTGTAGGCATAGTTCGAATTGGTCTCAAATTGGGGTCTGCGTGCGGTCAATCATTCCTCTGAACTCTGAAAATTGGTCAGATGTCAACCAAGACGATAAAAATGATATCATAAATAGACTT

Coding sequence (CDS)

GAAGAAGAGGATGGCAAGCCAGTTTGTAGGCATAGTTCGAATTGGTCTCAAATTGGGGTCTGCGTGCGGTCAATCATTCCTCTGAACTCTGAAAATTGGTCAGATGTCAACCAAGACGATAAAAATGATATCATAAATAGACTT

Protein sequence

EEEDGKPVCRHSSNWSQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL
Homology
[Close]
BLAST of MC09g0889 vs. NCBI nr
Match: XP_022156301.1 (uncharacterized protein LOC111023227 [Momordica charantia])

HSP 1 Score: 70.9 bits (172), Expect = 2.86e-13
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = 0 

Query: 1   EEEDGKPVCRHSSNW-SQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL 48
           EEED KPVC HS    SQIGV VRSI+ LN E+WSDVNQDDKN IINRL
Sbjct: 107 EEEDDKPVCSHSLKLVSQIGVWVRSIVSLNCEHWSDVNQDDKNSIINRL 155

[Close]
BLAST of MC09g0889 vs. NCBI nr
Match: KAA0046978.1 (formin-like protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 1.97e-05
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 3   EDGKPVCRHSSNW-SQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL 48
           ED KP+C+ SS   SQIG  VR+I+PL  E+WSDV+++ K +I++RL
Sbjct: 59  EDRKPICKDSSKLNSQIGKEVRAIVPLECEHWSDVSKEVKREIVDRL 105

[Close]
BLAST of MC09g0889 vs. NCBI nr
Match: TYK04806.1 (formin-like protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 2.01e-05
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 3   EDGKPVCRHSSNW-SQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL 48
           ED KP+C+ SS   SQIG  VR+I+PL  E+WSDV+++ K +I++RL
Sbjct: 76  EDRKPICKDSSKLNSQIGKEVRAIVPLECEHWSDVSKEVKREIVDRL 122

[Close]
BLAST of MC09g0889 vs. ExPASy TrEMBL
Match: A0A6J1DUJ0 (uncharacterized protein LOC111023227 OS=Momordica charantia OX=3673 GN=LOC111023227 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.38e-13
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = 0 

Query: 1   EEEDGKPVCRHSSNW-SQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL 48
           EEED KPVC HS    SQIGV VRSI+ LN E+WSDVNQDDKN IINRL
Sbjct: 107 EEEDDKPVCSHSLKLVSQIGVWVRSIVSLNCEHWSDVNQDDKNSIINRL 155

[Close]
BLAST of MC09g0889 vs. ExPASy TrEMBL
Match: A0A5A7TVR8 (Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G001640 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 9.55e-06
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 3   EDGKPVCRHSSNW-SQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL 48
           ED KP+C+ SS   SQIG  VR+I+PL  E+WSDV+++ K +I++RL
Sbjct: 59  EDRKPICKDSSKLNSQIGKEVRAIVPLECEHWSDVSKEVKREIVDRL 105

[Close]
BLAST of MC09g0889 vs. ExPASy TrEMBL
Match: A0A5D3C2Z5 (Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001300 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 9.74e-06
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 3   EDGKPVCRHSSNW-SQIGVCVRSIIPLNSENWSDVNQDDKNDIINRL 48
           ED KP+C+ SS   SQIG  VR+I+PL  E+WSDV+++ K +I++RL
Sbjct: 76  EDRKPICKDSSKLNSQIGKEVRAIVPLECEHWSDVSKEVKREIVDRL 122

The following BLAST results are available for this feature:
BLAST of MC09g0889 vs.
Match NameE-valueIdentityDescription
BLAST of MC09g0889 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156301.12.86e-1375.51uncharacterized protein LOC111023227 [Momordica charantia][more]
KAA0046978.11.97e-0553.19formin-like protein 4 isoform X2 [Cucumis melo var. makuwa][more]
TYK04806.12.01e-0553.19formin-like protein 4 isoform X2 [Cucumis melo var. makuwa][more]
BLAST of MC09g0889 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUJ01.38e-1375.51uncharacterized protein LOC111023227 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5A7TVR89.55e-0653.19Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5D3C2Z59.74e-0653.19Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
BLAST of MC09g0889 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0889.1MC09g0889.1mRNA