Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAGCTCAAAGGGTCAAGAACGGCTGACTGGGATGAGCTGGTGTCAGGAATGAGCTGAAAGCCCACTTGGTGAGGAAAGACCTGCACAAGAGAACAAACACTCCGACGCTCAA GTTAGTTTTGAGTCCGACCTTAGTATGGAGGCCGAGCTAGAATACGATACCTGACTAAAGAGTGAAGTGCCCTATTTATAGGCTGAGGTACCCAATAAAGAATTTGACCGGCAGTTGAGCATGTCGGGACTAAGGTCGGCCTATCGGGG GTAGCTATTCCAGTTCATACTGTTGTCATTTGGAATTTGACTAAGTATGGAAGGTCGTTCCTCCCTTGAATGTTCTTTAGGGAAGACCTTCAGATCGGCCTTTAAGGAAGGCTTCAGGTCGGCCATTAGGCAAGGCCTTCGGGTCCGCCCTCAAGGGAGCTCATCAGGCCGGCCCTTAGGGGAGCTCTTCAG GTCGGCCCTCAGTGGAGCTCTTTAGGTCGACCACTTCAGATAGGCCACCAAAAGGAAAATCTTTAGGTCGGCCAACAAAGGGAAGACCTCCAAAGTTGGACCTTTTTCTGTCCTCCACGTGGCAATACGATTTTCAACCCCCAAAAAGATAGGGTCCTTCTATTAGCCTGCATTCTATAGGCGCATTCTATTAACGTCGGACAGTTCATCCACAAGGAGATTGCCCAATGTGCTTCCAAAAGAACGGACTGCCTTTTCTTCCCTAGTCTCATCAGCAAACTTTGCCTCCGCAGAGACGTTCCAATCCTTGACGACAAGGAACCGCTTAAAGATAAACTGGTGATTGACAAGCATACGCTAAAGCGCCTAATGCTCCAAGACCCTATACGGTGTAGAGCTACGCTTACTACGACCATTAATGAAATGATGGCCCAATTTGCAAAACTCCAGAAACAATTAACGCATATGGAAGAAGTGCAGTCGGCTTTTGCCAACCAAGCAAATAAGAGAGATGCTGGCATCTTGGCGGCACTAGAGCATTGGAAAGCGGCAGCCCCATCTGCATCAACTACACCACCTGCTGGCTTGAATGTTCTGCTGGAGCAATCTGACAGTTTCGAAGAGGAATATTAG mRNA sequence
ATGACCAGCTCAAAGGGTCAAGAACGGCTGACTGGGATGAGCTGGTGTCAGGAATGAGCTGAAAGCCCACTTGGTGAGGAAAGACCTGCACAAGAGAACAAACACTCCGACGCTCAAGCTGAGGTACCCAATAAAGAATTTGACCGGCAGTTGAGCATGTCGGGACTAAGGTCGGCCTATCGGGGATCGGCCTTTAAGGAAGGCTTCAGGTCGGCCATTAGGCAAGGCCTTCGGGTCCGCCCTCAAGGGAGCTCATCAGGCCGGCCCTTAGGGGAGCTCTTCAGAGACGTTCCAATCCTTGACGACAAGGAACCGCTTAAAGATAAACTGGTGATTGACAAGCATACGCTAAAGCGCCTAATGCTCCAAGACCCTATACGGTGTAGAGCTACGCTTACTACGACCATTAATGAAATGATGGCCCAATTTGCAAAACTCCAGAAACAATTAACGCATATGGAAGAAGTGCAGTCGGCTTTTGCCAACCAAGCAAATAAGAGAGATGCTGGCATCTTGGCGGCACTAGAGCATTGGAAAGCGGCAGCCCCATCTGCATCAACTACACCACCTGCTGGCTTGAATGTTCTGCTGGAGCAATCTGACAGTTTCGAAGAGGAATATTAG Coding sequence (CDS)
ATGACCAGCTCAAAGGGTCAAGAACGGCTGACTGGGATGAGCTGGTGTCAGGAATGAGCTGAAAGCCCACTTGGTGAGGAAAGACCTGCACAAGAGAACAAACACTCCGACGCTCAAGCTGAGGTACCCAATAAAGAATTTGACCGGCAGTTGAGCATGTCGGGACTAAGGTCGGCCTATCGGGGATCGGCCTTTAAGGAAGGCTTCAGGTCGGCCATTAGGCAAGGCCTTCGGGTCCGCCCTCAAGGGAGCTCATCAGGCCGGCCCTTAGGGGAGCTCTTCAGAGACGTTCCAATCCTTGACGACAAGGAACCGCTTAAAGATAAACTGGTGATTGACAAGCATACGCTAAAGCGCCTAATGCTCCAAGACCCTATACGGTGTAGAGCTACGCTTACTACGACCATTAATGAAATGATGGCCCAATTTGCAAAACTCCAGAAACAATTAACGCATATGGAAGAAGTGCAGTCGGCTTTTGCCAACCAAGCAAATAAGAGAGATGCTGGCATCTTGGCGGCACTAGAGCATTGGAAAGCGGCAGCCCCATCTGCATCAACTACACCACCTGCTGGCTTGAATGTTCTGCTGGAGCAATCTGACAGTTTCGAAGAGGAATATTAG Protein sequence
MTSSKGQERLTGMSWCQEUAESPLGEERPAQENKHSDAQAEVPNKEFDRQLSMSGLRSAYRGSAFKEGFRSAIRQGLRVRPQGSSSGRPLGELFRDVPILDDKEPLKDKLVIDKHTLKRLMLQDPIRCRATLTTTINEMMAQFAKLQKQLTHMEEVQSAFANQANKRDAGILAALEHWKAAAPSASTTPPAGLNVLLEQSDSFEEEY
Homology
BLAST of MC08g_new0273 vs. NCBI nr
Match:
XP_022158518.1 (uncharacterized protein LOC111024990 [Momordica charantia])
HSP 1 Score: 77.0 bits (188), Expect = 1.75e-13
Identity = 42/60 (70.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 148 KQLTHMEEVQSAFANQANKRDAGILAALEHWKAAAPSASTTPPAGLNVLLEQSDSFEEEY 207 KQLT MEE QSAFANQA KR+ I AALE KA APS ST AGL V LEQ SFEEEY Sbjct: 126 KQLTRMEEAQSAFANQAKKREVNIFAALERLKAEAPSTSTVTSAGLKVSLEQFGSFEEEY 185
BLAST of MC08g_new0273 vs. ExPASy TrEMBL
Match:
A0A6J1DWB5 (uncharacterized protein LOC111024990 OS=Momordica charantia OX=3673 GN=LOC111024990 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 8.46e-14
Identity = 42/60 (70.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 148 KQLTHMEEVQSAFANQANKRDAGILAALEHWKAAAPSASTTPPAGLNVLLEQSDSFEEEY 207 KQLT MEE QSAFANQA KR+ I AALE KA APS ST AGL V LEQ SFEEEY Sbjct: 126 KQLTRMEEAQSAFANQAKKREVNIFAALERLKAEAPSTSTVTSAGLKVSLEQFGSFEEEY 185
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
XP_022158518.1 1.75e-13 70.00 uncharacterized protein LOC111024990 [Momordica charantia] [more]
Match Name E-value Identity Description
A0A6J1DWB5 8.46e-14 70.00 uncharacterized protein LOC111024990 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
A T G A C C A G C T C A A A G G G T C A A G A A C G G C T G A C T G G G A T G A G C T G G T G T C A G G A A T G A G C T G A A A G C C C A C T T G G T G A G G A A A G A C C T G C A C A A G A G A A C A A A C A C T C C G A C G C T C A A G C T G A G G T A C C C A A T A A A G A A T T T G A C C G G C A G T T G A G C A T G T C G G G A C T A A G G T C G G C C T A T C G G G G A T C G G C C T T T A A G G A A G G C T T C A G G T C G G C C A T T A G G C A A G G C C T T C G G G T C C G C C C T C A A G G G A G C T C A T C A G G C C G G C C C T T A G G G G A G C T C T T C A G A G A C G T T C C A A T C C T T G A C G A C A A G G A A C C G C T T A A A G A T A A A C T G G T G A T T G A C A A G C A T A C G C T A A A G C G C C T A A T G C T C C A A G A C C C T A T A C G G T G T A G A G C T A C G C T T A C T A C G A C C A T T A A T G A A A T G A T G G C C C A A T T T G C A A A A C T C C A G A A A C A A T T A A C G C A T A T G G A A G A A G T G C A G T C G G C T T T T G C C A A C C A A G C A A A T A A G A G A G A T G C T G G C A T C T T G G C G G C A C T A G A G C A T T G G A A A G C G G C A G C C C C A T C T G C A T C A A C T A C A C C A C C T G C T G G C T T G A A T G T T C T G C T G G A G C A A T C T G A C A G T T T C G A A G A G G A A T A T T A G 50 100 150 200 250 300 350 400 450 500 550 600 Score = Score = Score = Sequence Coil mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 128..155
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..51
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 24..43
Relationships
The following mRNA feature(s) are a part of this gene: