MC08g2529 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2529
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 34050557 .. 34050661 (+)
RNA-Seq Expression	MC08g2529
Synteny	MC08g2529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGATAGTGACGAAGGTAACCTACTTTCGGTGGATGCGGAGCCAACGAGTTCAGTTGAACAGCGTAATGAGTCTAAGGTTACAGAAGTGTTCGCCAACTTTA

mRNA sequence

ATGCTGATAGTGACGAAGGTAACCTACTTTCGGTGGATGCGGAGCCAACGAGTTCAGTTGAACAGCGTAATGAGTCTAAGGTTACAGAAGTGTTCGCCAACTTTA

Coding sequence (CDS)

ATGCTGATAGTGACGAAGGTAACCTACTTTCGGTGGATGCGGAGCCAACGAGTTCAGTTGAACAGCGTAATGAGTCTAAGGTTACAGAAGTGTTCGCCAACTTTA

Protein sequence

MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL

Homology

[Close]

BLAST of MC08g2529 vs. NCBI nr
Match: PHT81424.1 (hypothetical protein T459_14439 [Capsicum annuum] >PHT89489.1 hypothetical protein T459_04602 [Capsicum annuum])

HSP 1 Score: 51.6 bits (122), Expect = 1.05e-06
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0


Query: 1   MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
           ML VTKVT FRW RSQRV+ NSV SLRLQK SPTL
Sbjct: 72  MLTVTKVTDFRWTRSQRVRSNSVTSLRLQKPSPTL 106

[Close]

BLAST of MC08g2529 vs. NCBI nr
Match: KAG2247429.1 (hypothetical protein Bca52824_087057 [Brassica carinata])

HSP 1 Score: 50.8 bits (120), Expect = 1.83e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1  MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
          ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 1  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQKRSPTL 35

[Close]

BLAST of MC08g2529 vs. NCBI nr
Match: CAD5336178.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 50.8 bits (120), Expect = 2.39e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1  MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
          ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 1  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQKRSPTL 35

[Close]

BLAST of MC08g2529 vs. NCBI nr
Match: PKI36992.1 (hypothetical protein CRG98_042614 [Punica granatum])

HSP 1 Score: 50.8 bits (120), Expect = 5.55e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1  MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
          ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 28 MLTVTKVTDFRWTRSQRVQSKSVASLRLQKRSPTL 62

[Close]

BLAST of MC08g2529 vs. NCBI nr
Match: CAD5336211.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 50.8 bits (120), Expect = 5.69e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
           ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 72  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQKRSPTL 106

[Close]

BLAST of MC08g2529 vs. ExPASy TrEMBL
Match: A0A2G2ZHK4 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_04602 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.06e-07
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0


Query: 1   MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
           ML VTKVT FRW RSQRV+ NSV SLRLQK SPTL
Sbjct: 72  MLTVTKVTDFRWTRSQRVRSNSVTSLRLQKPSPTL 106

[Close]

BLAST of MC08g2529 vs. ExPASy TrEMBL
Match: A0A7G2FJM3 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23387 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.16e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1  MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
          ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 1  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQKRSPTL 35

[Close]

BLAST of MC08g2529 vs. ExPASy TrEMBL
Match: A0A2I0HZ57 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042614 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.69e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1  MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
          ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 28 MLTVTKVTDFRWTRSQRVQSKSVASLRLQKRSPTL 62

[Close]

BLAST of MC08g2529 vs. ExPASy TrEMBL
Match: A0A7G2FNI8 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23419 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.75e-06
Identity = 28/35 (80.00%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
           ML VTKVT FRW RSQRVQ  SV SLRLQK SPTL
Sbjct: 72  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQKRSPTL 106

[Close]

BLAST of MC08g2529 vs. ExPASy TrEMBL
Match: A0A2G3AVH2 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32823 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.98e-06
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0


Query: 1   MLIVTKVTYFRWMRSQRVQLNSVMSLRLQKCSPTL 35
           ML V KV  FRW RSQRV+ NSVMSLRLQK SPTL
Sbjct: 72  MLTVMKVIDFRWTRSQRVRSNSVMSLRLQKPSPTL 106

The following BLAST results are available for this feature:

BLAST of MC08g2529 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g2529 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT81424.1	1.05e-06	80.00	hypothetical protein T459_14439 [Capsicum annuum] >PHT89489.1 hypothetical prote...	[more]
KAG2247429.1	1.83e-06	80.00	hypothetical protein Bca52824_087057 [Brassica carinata]	[more]
CAD5336178.1	2.39e-06	80.00	unnamed protein product [Arabidopsis thaliana]	[more]
PKI36992.1	5.55e-06	80.00	hypothetical protein CRG98_042614 [Punica granatum]	[more]
CAD5336211.1	5.69e-06	80.00	unnamed protein product [Arabidopsis thaliana]	[more]

BLAST of MC08g2529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G2ZHK4	5.06e-07	80.00	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_04602 PE=4 SV=1	[more]
A0A7G2FJM3	1.16e-06	80.00	(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC...	[more]
A0A2I0HZ57	2.69e-06	80.00	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042614 PE=4 SV=1	[more]
A0A7G2FNI8	2.75e-06	80.00	(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC...	[more]
A0A2G3AVH2	3.98e-06	77.14	Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32823 PE=4 SV=1	[more]

BLAST of MC08g2529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2529.1	MC08g2529.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion