MC08g2488 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2488
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	HTH cro/C1-type domain-containing protein
Location	MC08: 33703282 .. 33703716 (+)
RNA-Seq Expression	MC08g2488
Synteny	MC08g2488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCAAGGGCGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGATCAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGCGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGGCGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAGGTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG

mRNA sequence

ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCAAGGGCGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGATCAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGCGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGGCGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAGGTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG

Coding sequence (CDS)

ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCAAGGGCGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGATCAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGCGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGGCGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAGGTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG

Protein sequence

MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAAAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

Homology

[Close]

BLAST of MC08g2488 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.3e-56
Identity = 117/148 (79.05%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSR+PGA+TQDWEP+VLHK+K ++QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  +
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  AAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYE 120
            AV   N +KL+E TE AA+DRV AEVRL IQKARLEKKMSQA++AKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKLEKVLGVKLRGKSGK 146
           NGKAVPNQAVLAK+EKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of MC08g2488 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 77/137 (56.20%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-AAVNA 66
           G ITQDWEP+V+ K  P A   RD K VN A RSGA ++TV+KF+AGSNK A++  ++N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQ 126
           +KLD+ TE  + DRV  E++ AI +AR EKK++Q+++A  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKLEKVLGVKLRGK 143
            +L+KLE+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of MC08g2488 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-31
Identity = 72/137 (52.55%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-AAVNA 66
           G ITQDWEP+V+ K    A   RD K VN A RSGA ++TV+KF+AG+NK A++  ++N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQ 126
           + LD+ TE    +RV  E++ AI +AR +KK++Q+++A+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKLEKVLGVKLRGK 143
            +L+KLE+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of MC08g2488 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.9e-19
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 12  DWEPM-VLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAAAVNARKLDE 71
           DW+ + VL K  P A   +  +A+  A R G +V+T KK+ AG NK+      N  KLD 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR-NTAKLDR 64

Query: 72  GTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQAVLAK 131
            TE    DRV  EV   IQ+ R  K M+Q ++A +INE+ QV+ +YE GKA+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGK 124

Query: 132 LEKVLGVKLRGK 143
           +E+V+G+KLRGK
Sbjct: 125 IERVIGLKLRGK 135

[Close]

BLAST of MC08g2488 vs. ExPASy Swiss-Prot
Match: Q9JMG1 (Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 12  DWEPM-VLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAAAVNARKLDE 71
           DW+ + VL K  P A   +  +A+  A R G  V+T KK+ AG NK+ +    N  KLD 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK-NTAKLDR 64

Query: 72  GTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQAVLAK 131
            TE    DRV+ EV   IQ+ R  K ++Q ++A +INE+ QV+ +YE+G+A+PN  VL K
Sbjct: 65  ETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGK 124

Query: 132 LEKVLGVKLRGK 143
           +E+ +G+KLRGK
Sbjct: 125 IERAIGLKLRGK 135

[Close]

BLAST of MC08g2488 vs. NCBI nr
Match: XP_038890461.1 (multiprotein-bridging factor 1c [Benincasa hispida])

HSP 1 Score: 241 bits (616), Expect = 1.34e-79
Identity = 133/145 (91.72%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI QDWEP+VLHKAKP+AQ LRDPKAVNQAIRSGA VQTVKKFDAGSNKKAAA
Sbjct: 1   MPSRFPGAIAQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKLDE TE AALDRV+AEVRLAIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLDELTEPAALDRVAAEVRLAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MC08g2488 vs. NCBI nr
Match: XP_022965996.1 (multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-bridging factor 1c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238 bits (607), Expect = 3.15e-78
Identity = 130/145 (89.66%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+AQDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MC08g2488 vs. NCBI nr
Match: XP_022937454.1 (multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021281.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236 bits (603), Expect = 1.28e-77
Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+AQDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+ KQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MC08g2488 vs. NCBI nr
Match: TYK10712.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (601), Expect = 2.58e-77
Identity = 128/145 (88.28%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+AQ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MC08g2488 vs. NCBI nr
Match: XP_004139340.1 (multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical protein Csa_019517 [Cucumis sativus])

HSP 1 Score: 234 bits (597), Expect = 1.05e-76
Identity = 127/145 (87.59%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+AQ LRDPKAVNQAIRSGA VQTVKKFDAG NKK  A
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKL+EGTE AALDRV+ EVR AIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MC08g2488 vs. ExPASy TrEMBL
Match: A0A6J1HN61 (multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 1.52e-78
Identity = 130/145 (89.66%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+AQDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MC08g2488 vs. ExPASy TrEMBL
Match: A0A6J1FB80 (multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 6.20e-78
Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+AQDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+ KQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MC08g2488 vs. ExPASy TrEMBL
Match: A0A5D3CHG2 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00210 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 1.25e-77
Identity = 128/145 (88.28%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+AQ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MC08g2488 vs. ExPASy TrEMBL
Match: A0A0A0LFV9 (HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G004720 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 5.09e-77
Identity = 127/145 (87.59%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+AQ LRDPKAVNQAIRSGA VQTVKKFDAG NKK  A
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKL+EGTE AALDRV+ EVR AIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MC08g2488 vs. ExPASy TrEMBL
Match: A0A5A7V2S1 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001220 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.65e-76
Identity = 128/145 (88.28%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+AQ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  AAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
           A VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 128 APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 187

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 188 AVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of MC08g2488 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 218.4 bits (555), Expect = 3.8e-57
Identity = 117/148 (79.05%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSR+PGA+TQDWEP+VLHK+K ++QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  +
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  AAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYE 120
            AV   N +KL+E TE AA+DRV AEVRL IQKARLEKKMSQA++AKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKLEKVLGVKLRGKSGK 146
           NGKAVPNQAVLAK+EKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of MC08g2488 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 77/137 (56.20%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-AAVNA 66
           G ITQDWEP+V+ K  P A   RD K VN A RSGA ++TV+KF+AGSNK A++  ++N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQ 126
           +KLD+ TE  + DRV  E++ AI +AR EKK++Q+++A  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKLEKVLGVKLRGK 143
            +L+KLE+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of MC08g2488 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-32
Identity = 72/137 (52.55%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-AAVNA 66
           G ITQDWEP+V+ K    A   RD K VN A RSGA ++TV+KF+AG+NK A++  ++N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQ 126
           + LD+ TE    +RV  E++ AI +AR +KK++Q+++A+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKLEKVLGVKLRGK 143
            +L+KLE+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of MC08g2488 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 1  MPSRFPGAITQDWEPMVLHKAKPRAQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
          MPSR+PGA+TQDWEP+VLHK+K ++QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  +
Sbjct: 1  MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61 AAV---NARKLDEGTEAAALDRVSAEVRLAIQKAR 93
           AV   N +KL+E TE AA+DRV AEVRL +++ R
Sbjct: 61 TAVPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of MC08g2488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV58	5.3e-56	79.05	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q9LXT3	1.7e-33	56.20	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	4.6e-31	52.55	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q6GPQ6	8.9e-19	44.70	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q9JMG1	3.4e-18	43.18	Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE...	[more]

BLAST of MC08g2488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890461.1	1.34e-79	91.72	multiprotein-bridging factor 1c [Benincasa hispida]	[more]
XP_022965996.1	3.15e-78	89.66	multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-...	[more]
XP_022937454.1	1.28e-77	88.97	multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-...	[more]
TYK10712.1	2.58e-77	88.28	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]
XP_004139340.1	1.05e-76	87.59	multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical prote...	[more]

BLAST of MC08g2488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HN61	1.52e-78	89.66	multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4...	[more]
A0A6J1FB80	6.20e-78	88.97	multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE...	[more]
A0A5D3CHG2	1.25e-77	88.28	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LFV9	5.09e-77	87.59	HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00...	[more]
A0A5A7V2S1	1.65e-76	88.28	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MC08g2488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24500.1	3.8e-57	79.05	multiprotein bridging factor 1C	[more]
AT3G58680.1	1.2e-34	56.20	multiprotein bridging factor 1B	[more]
AT2G42680.1	3.2e-32	52.55	multiprotein bridging factor 1A	[more]
AT3G24500.2	7.5e-29	67.37	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..110
None	No IPR available	PANTHER	PTHR10245:SF71	MULTIPROTEIN-BRIDGING FACTOR 1C	coord: 1..144
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..144
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 87..142 e-value: 3.7E-13 score: 59.7
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 88..139 e-value: 9.9E-14 score: 51.1
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 88..142 score: 13.776644
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 87..139 e-value: 2.62237E-11 score: 53.711
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 71..145 e-value: 1.8E-27 score: 96.7
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 85..139
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 11..80 e-value: 6.1E-20 score: 71.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2488.1	MC08g2488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009408	response to heat
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003713	transcription coactivator activity