Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACACAACCAGTCTTCGGTTTGGCCAAACGAATGTTTCTGATGAGACGACGACTCTCTTGAATTTGATTTTTTTGGTAAAAGGGAATACTTTGGATTCAATATTCTCACATTGCGGAAATGTCTCCGACACCGGAGCTCTAGATCTGGGAATCGAAGGGTCGTCGGTTTGCCTCCGGCAACGGGAGCTTCTGCAGACGAAAATGAATGGGTCTACGGATCTTTTTTTGCAGGCGCAAGAATTTATTTATCACAGCAGTGGCAAGAAGAAATTTTACAGAGGAGTGCGGCAGAGATAT
mRNA sequence
ATGATGAACACAACCAGTCTTCGGTTTGGCCAAACGAATGTTTCTGATGAGACGACGACTCTCTTGAATTTGATTTTTTTGGTAAAAGGGAATACTTTGGATTCAATATTCTCACATTGCGGAAATGTCTCCGACACCGGAGCTCTAGATCTGGGAATCGAAGGGTCGTCGGTTTGCCTCCGGCAACGGGAGCTTCTGCAGACGAAAATGAATGGGTCTACGGATCTTTTTTTGCAGGCGCAAGAATTTATTTATCACAGCAGTGGCAAGAAGAAATTTTACAGAGGAGTGCGGCAGAGATAT
Coding sequence (CDS)
ATGATGAACACAACCAGTCTTCGGTTTGGCCAAACGAATGTTTCTGATGAGACGACGACTCTCTTGAATTTGATTTTTTTGGTAAAAGGGAATACTTTGGATTCAATATTCTCACATTGCGGAAATGTCTCCGACACCGGAGCTCTAGATCTGGGAATCGAAGGGTCGTCGGTTTGCCTCCGGCAACGGGAGCTTCTGCAGACGAAAATGAATGGGTCTACGGATCTTTTTTTGCAGGCGCAAGAATTTATTTATCACAGCAGTGGCAAGAAGAAATTTTACAGAGGAGTGCGGCAGAGATAT
Protein sequence
MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVSDTGALDLGIEGSSVCLRQRELLQTKMNGSTDLFLQAQEFIYHSSGKKKFYRGVRQRY
Homology
BLAST of MC08g2272 vs. NCBI nr
Match:
XP_022146001.1 (ethylene-responsive transcription factor ERF061-like [Momordica charantia])
HSP 1 Score: 107 bits (266), Expect = 4.05e-25
Identity = 70/113 (61.95%), Postives = 76/113 (67.26%), Query Frame = 0
Query: 1 MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNT-LDSIFSHCGNVSDTGALDLGIEGSSVC 60
MMNT SL FG T+VSD T TL NLI GNT LDSIFSHCGN GALD GI GSSV
Sbjct: 3 MMNTASLPFGLTDVSDVTATLSNLILTGGGNTTLDSIFSHCGNFVG-GALDQGIGGSSVY 62
Query: 61 LRQRELLQT-----KMNGSTDLFLQAQEFIYHSS------GKKKFYRGVRQRY 101
LRQRELLQ K+NGS DLF +A E +Y S G+KK YRGVRQR+
Sbjct: 63 LRQRELLQRFSQDRKVNGSRDLFSRAYELLYSRSAAVGGGGEKKLYRGVRQRH 114
BLAST of MC08g2272 vs. NCBI nr
Match:
KAG7017013.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 80.9 bits (198), Expect = 1.31e-15
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 0
Query: 1 MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGN---VSDTGALDLGIEGSS 60
MMN L+F T+VS T L NLI GNTLDSIFSHC N V+D G D + GSS
Sbjct: 4 MMNRADLQFQLTDVS---TALSNLILTGGGNTLDSIFSHCENLASVNDGGDFDR-LVGSS 63
Query: 61 VCLRQRELLQ-----TKMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
V L+QRE+L+ +K NGS DLF +A E +Y SG ++K YRGVRQR+
Sbjct: 64 VYLQQREVLKRFSQDSKPNGSRDLFSRAYELLYSRSGAAVGGGERKLYRGVRQRH 114
BLAST of MC08g2272 vs. NCBI nr
Match:
KAG6579553.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 80.9 bits (198), Expect = 1.36e-15
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 0
Query: 1 MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGN---VSDTGALDLGIEGSS 60
MMN L+F T+VS T L NLI GNTLDSIFSHC N V+D G D + GSS
Sbjct: 4 MMNRADLQFQLTDVS---TALSNLILTGGGNTLDSIFSHCENLASVNDGGDFDR-LVGSS 63
Query: 61 VCLRQRELLQ-----TKMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
V L+QRE+L+ +K NGS DLF +A E +Y SG ++K YRGVRQR+
Sbjct: 64 VYLQQREVLKRFSQDSKPNGSRDLFSRAYELLYSRSGAAVGGGERKLYRGVRQRH 114
BLAST of MC08g2272 vs. NCBI nr
Match:
KAG6605566.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 79.3 bits (194), Expect = 3.52e-15
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0
Query: 10 GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVS----DTGALDLGIEGSSVCLRQREL 69
G +D +T L NLI GNTLDSIFSHC N S D D + GSSV LRQRE+
Sbjct: 5 GTLQFTDVSTALSNLILTTGGNTLDSIFSHCDNFSCSVIDGVDFDPAV-GSSVYLRQREV 64
Query: 70 LQT-----KMNGSTDLFLQAQEFIYH------SSGKKKFYRGVRQR 100
LQ K NGS DLF +A E +Y S GK+K YRGVRQR
Sbjct: 65 LQRFSQERKANGSRDLFAKAYELLYSGCGAAVSGGKRKVYRGVRQR 109
BLAST of MC08g2272 vs. NCBI nr
Match:
XP_022958007.1 (ethylene-responsive transcription factor ERF061-like [Cucurbita moschata])
HSP 1 Score: 79.3 bits (194), Expect = 4.71e-15
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0
Query: 10 GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVS----DTGALDLGIEGSSVCLRQREL 69
G +D +T L NLI GNTLDSIFSHC N S D D + GSSV LRQRE+
Sbjct: 8 GTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSCSVIDGVDFDPAV-GSSVYLRQREV 67
Query: 70 LQT-----KMNGSTDLFLQAQEFIYH------SSGKKKFYRGVRQR 100
LQ K NGS DLF +A E +Y S GK+K YRGVRQR
Sbjct: 68 LQRFSQERKANGSRDLFAKAYELLYSGCGAAVSGGKRKVYRGVRQR 112
BLAST of MC08g2272 vs. ExPASy TrEMBL
Match:
A0A6J1CY24 (ethylene-responsive transcription factor ERF061-like OS=Momordica charantia OX=3673 GN=LOC111015313 PE=4 SV=1)
HSP 1 Score: 107 bits (266), Expect = 1.96e-25
Identity = 70/113 (61.95%), Postives = 76/113 (67.26%), Query Frame = 0
Query: 1 MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNT-LDSIFSHCGNVSDTGALDLGIEGSSVC 60
MMNT SL FG T+VSD T TL NLI GNT LDSIFSHCGN GALD GI GSSV
Sbjct: 3 MMNTASLPFGLTDVSDVTATLSNLILTGGGNTTLDSIFSHCGNFVG-GALDQGIGGSSVY 62
Query: 61 LRQRELLQT-----KMNGSTDLFLQAQEFIYHSS------GKKKFYRGVRQRY 101
LRQRELLQ K+NGS DLF +A E +Y S G+KK YRGVRQR+
Sbjct: 63 LRQRELLQRFSQDRKVNGSRDLFSRAYELLYSRSAAVGGGGEKKLYRGVRQRH 114
BLAST of MC08g2272 vs. ExPASy TrEMBL
Match:
A0A6J1H0R0 (ethylene-responsive transcription factor ERF061-like OS=Cucurbita moschata OX=3662 GN=LOC111459370 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 2.28e-15
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0
Query: 10 GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVS----DTGALDLGIEGSSVCLRQREL 69
G +D +T L NLI GNTLDSIFSHC N S D D + GSSV LRQRE+
Sbjct: 8 GTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSCSVIDGVDFDPAV-GSSVYLRQREV 67
Query: 70 LQT-----KMNGSTDLFLQAQEFIYH------SSGKKKFYRGVRQR 100
LQ K NGS DLF +A E +Y S GK+K YRGVRQR
Sbjct: 68 LQRFSQERKANGSRDLFAKAYELLYSGCGAAVSGGKRKVYRGVRQR 112
BLAST of MC08g2272 vs. ExPASy TrEMBL
Match:
A0A6J1K5K2 (ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661 GN=LOC111490954 PE=4 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 4.37e-15
Identity = 52/105 (49.52%), Postives = 60/105 (57.14%), Query Frame = 0
Query: 10 GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVSDTGALDLGIE---GSSVCLRQRELL 69
G +D +T L NLI GNTLDSIFSHC N S + + E GSSV LRQRE+L
Sbjct: 8 GTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSRSVIDGVDFEQAVGSSVYLRQREVL 67
Query: 70 QT-----KMNGSTDLFLQAQEFIYHS------SGKKKFYRGVRQR 100
Q K NGS DLF +A E +Y GK+K YRGVRQR
Sbjct: 68 QRFSQERKANGSRDLFAKAYEVLYSGCGAAVGGGKRKVYRGVRQR 112
BLAST of MC08g2272 vs. ExPASy TrEMBL
Match:
A0A0A0KMF6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150420 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 1.23e-14
Identity = 57/114 (50.00%), Postives = 70/114 (61.40%), Query Frame = 0
Query: 1 MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVSD-TGALDLG-IEGSSV 60
M+NT +L+FG T+VS T L NLI GNTLDSI SH N+S T + D GSSV
Sbjct: 4 MINTPNLQFGLTDVS---TALSNLILTGGGNTLDSILSHYENLSSVTDSRDFQPAAGSSV 63
Query: 61 CLRQRELLQT-----KMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
L+QRE+LQ K NGS DLF +A E +Y SG ++K YRGVRQR+
Sbjct: 64 YLQQREVLQKFSQDRKSNGSRDLFSRAYELLYSRSGAAVNGGERKIYRGVRQRH 114
BLAST of MC08g2272 vs. ExPASy TrEMBL
Match:
A0A6J1I4G2 (ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661 GN=LOC111469073 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 1.25e-14
Identity = 57/115 (49.57%), Postives = 70/115 (60.87%), Query Frame = 0
Query: 1 MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGN---VSDTGALDLGIEGSS 60
MMN T L+F T+VS T L NLI GNTLDSIFSHC N V+D G + GSS
Sbjct: 4 MMNRTDLQFQLTDVS---TALSNLILTGGGNTLDSIFSHCENLTSVNDGGDFVRPV-GSS 63
Query: 61 VCLRQRELLQT-----KMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
V L+Q+E+L+ K NGS DLF +A E +Y SG ++K YRGVRQR+
Sbjct: 64 VYLQQQEVLKRFSENDKPNGSRDLFSRAYELLYSRSGAAVGGGERKLYRGVRQRH 114
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022146001.1 | 4.05e-25 | 61.95 | ethylene-responsive transcription factor ERF061-like [Momordica charantia] | [more] |
| KAG7017013.1 | 1.31e-15 | 50.43 | Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... | [more] |
| KAG6579553.1 | 1.36e-15 | 50.43 | Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... | [more] |
| KAG6605566.1 | 3.52e-15 | 50.94 | Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... | [more] |
| XP_022958007.1 | 4.71e-15 | 50.94 | ethylene-responsive transcription factor ERF061-like [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CY24 | 1.96e-25 | 61.95 | ethylene-responsive transcription factor ERF061-like OS=Momordica charantia OX=3... | [more] |
| A0A6J1H0R0 | 2.28e-15 | 50.94 | ethylene-responsive transcription factor ERF061-like OS=Cucurbita moschata OX=36... | [more] |
| A0A6J1K5K2 | 4.37e-15 | 49.52 | ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661... | [more] |
| A0A0A0KMF6 | 1.23e-14 | 50.00 | AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150420 PE=... | [more] |
| A0A6J1I4G2 | 1.25e-14 | 49.57 | ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
