MC08g2272 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2272
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ethylene-responsive transcription factor ERF061-like
Location	MC08: 31516787 .. 31517089 (-)
RNA-Seq Expression	MC08g2272
Synteny	MC08g2272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAACACAACCAGTCTTCGGTTTGGCCAAACGAATGTTTCTGATGAGACGACGACTCTCTTGAATTTGATTTTTTTGGTAAAAGGGAATACTTTGGATTCAATATTCTCACATTGCGGAAATGTCTCCGACACCGGAGCTCTAGATCTGGGAATCGAAGGGTCGTCGGTTTGCCTCCGGCAACGGGAGCTTCTGCAGACGAAAATGAATGGGTCTACGGATCTTTTTTTGCAGGCGCAAGAATTTATTTATCACAGCAGTGGCAAGAAGAAATTTTACAGAGGAGTGCGGCAGAGATAT

mRNA sequence

ATGATGAACACAACCAGTCTTCGGTTTGGCCAAACGAATGTTTCTGATGAGACGACGACTCTCTTGAATTTGATTTTTTTGGTAAAAGGGAATACTTTGGATTCAATATTCTCACATTGCGGAAATGTCTCCGACACCGGAGCTCTAGATCTGGGAATCGAAGGGTCGTCGGTTTGCCTCCGGCAACGGGAGCTTCTGCAGACGAAAATGAATGGGTCTACGGATCTTTTTTTGCAGGCGCAAGAATTTATTTATCACAGCAGTGGCAAGAAGAAATTTTACAGAGGAGTGCGGCAGAGATAT

Coding sequence (CDS)

ATGATGAACACAACCAGTCTTCGGTTTGGCCAAACGAATGTTTCTGATGAGACGACGACTCTCTTGAATTTGATTTTTTTGGTAAAAGGGAATACTTTGGATTCAATATTCTCACATTGCGGAAATGTCTCCGACACCGGAGCTCTAGATCTGGGAATCGAAGGGTCGTCGGTTTGCCTCCGGCAACGGGAGCTTCTGCAGACGAAAATGAATGGGTCTACGGATCTTTTTTTGCAGGCGCAAGAATTTATTTATCACAGCAGTGGCAAGAAGAAATTTTACAGAGGAGTGCGGCAGAGATAT

Protein sequence

MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVSDTGALDLGIEGSSVCLRQRELLQTKMNGSTDLFLQAQEFIYHSSGKKKFYRGVRQRY

Homology

[Close]

BLAST of MC08g2272 vs. NCBI nr
Match: XP_022146001.1 (ethylene-responsive transcription factor ERF061-like [Momordica charantia])

HSP 1 Score: 107 bits (266), Expect = 4.05e-25
Identity = 70/113 (61.95%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 1   MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNT-LDSIFSHCGNVSDTGALDLGIEGSSVC 60
           MMNT SL FG T+VSD T TL NLI    GNT LDSIFSHCGN    GALD GI GSSV 
Sbjct: 3   MMNTASLPFGLTDVSDVTATLSNLILTGGGNTTLDSIFSHCGNFVG-GALDQGIGGSSVY 62

Query: 61  LRQRELLQT-----KMNGSTDLFLQAQEFIYHSS------GKKKFYRGVRQRY 101
           LRQRELLQ      K+NGS DLF +A E +Y  S      G+KK YRGVRQR+
Sbjct: 63  LRQRELLQRFSQDRKVNGSRDLFSRAYELLYSRSAAVGGGGEKKLYRGVRQRH 114

[Close]

BLAST of MC08g2272 vs. NCBI nr
Match: KAG7017013.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.9 bits (198), Expect = 1.31e-15
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGN---VSDTGALDLGIEGSS 60
           MMN   L+F  T+VS   T L NLI    GNTLDSIFSHC N   V+D G  D  + GSS
Sbjct: 4   MMNRADLQFQLTDVS---TALSNLILTGGGNTLDSIFSHCENLASVNDGGDFDR-LVGSS 63

Query: 61  VCLRQRELLQ-----TKMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
           V L+QRE+L+     +K NGS DLF +A E +Y  SG      ++K YRGVRQR+
Sbjct: 64  VYLQQREVLKRFSQDSKPNGSRDLFSRAYELLYSRSGAAVGGGERKLYRGVRQRH 114

[Close]

BLAST of MC08g2272 vs. NCBI nr
Match: KAG6579553.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.9 bits (198), Expect = 1.36e-15
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGN---VSDTGALDLGIEGSS 60
           MMN   L+F  T+VS   T L NLI    GNTLDSIFSHC N   V+D G  D  + GSS
Sbjct: 4   MMNRADLQFQLTDVS---TALSNLILTGGGNTLDSIFSHCENLASVNDGGDFDR-LVGSS 63

Query: 61  VCLRQRELLQ-----TKMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
           V L+QRE+L+     +K NGS DLF +A E +Y  SG      ++K YRGVRQR+
Sbjct: 64  VYLQQREVLKRFSQDSKPNGSRDLFSRAYELLYSRSGAAVGGGERKLYRGVRQRH 114

[Close]

BLAST of MC08g2272 vs. NCBI nr
Match: KAG6605566.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.3 bits (194), Expect = 3.52e-15
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 10  GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVS----DTGALDLGIEGSSVCLRQREL 69
           G    +D +T L NLI    GNTLDSIFSHC N S    D    D  + GSSV LRQRE+
Sbjct: 5   GTLQFTDVSTALSNLILTTGGNTLDSIFSHCDNFSCSVIDGVDFDPAV-GSSVYLRQREV 64

Query: 70  LQT-----KMNGSTDLFLQAQEFIYH------SSGKKKFYRGVRQR 100
           LQ      K NGS DLF +A E +Y       S GK+K YRGVRQR
Sbjct: 65  LQRFSQERKANGSRDLFAKAYELLYSGCGAAVSGGKRKVYRGVRQR 109

[Close]

BLAST of MC08g2272 vs. NCBI nr
Match: XP_022958007.1 (ethylene-responsive transcription factor ERF061-like [Cucurbita moschata])

HSP 1 Score: 79.3 bits (194), Expect = 4.71e-15
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 10  GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVS----DTGALDLGIEGSSVCLRQREL 69
           G    +D +T L NLI    GNTLDSIFSHC N S    D    D  + GSSV LRQRE+
Sbjct: 8   GTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSCSVIDGVDFDPAV-GSSVYLRQREV 67

Query: 70  LQT-----KMNGSTDLFLQAQEFIYH------SSGKKKFYRGVRQR 100
           LQ      K NGS DLF +A E +Y       S GK+K YRGVRQR
Sbjct: 68  LQRFSQERKANGSRDLFAKAYELLYSGCGAAVSGGKRKVYRGVRQR 112

[Close]

BLAST of MC08g2272 vs. ExPASy TrEMBL
Match: A0A6J1CY24 (ethylene-responsive transcription factor ERF061-like OS=Momordica charantia OX=3673 GN=LOC111015313 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 1.96e-25
Identity = 70/113 (61.95%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 1   MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNT-LDSIFSHCGNVSDTGALDLGIEGSSVC 60
           MMNT SL FG T+VSD T TL NLI    GNT LDSIFSHCGN    GALD GI GSSV 
Sbjct: 3   MMNTASLPFGLTDVSDVTATLSNLILTGGGNTTLDSIFSHCGNFVG-GALDQGIGGSSVY 62

Query: 61  LRQRELLQT-----KMNGSTDLFLQAQEFIYHSS------GKKKFYRGVRQRY 101
           LRQRELLQ      K+NGS DLF +A E +Y  S      G+KK YRGVRQR+
Sbjct: 63  LRQRELLQRFSQDRKVNGSRDLFSRAYELLYSRSAAVGGGGEKKLYRGVRQRH 114

[Close]

BLAST of MC08g2272 vs. ExPASy TrEMBL
Match: A0A6J1H0R0 (ethylene-responsive transcription factor ERF061-like OS=Cucurbita moschata OX=3662 GN=LOC111459370 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.28e-15
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 10  GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVS----DTGALDLGIEGSSVCLRQREL 69
           G    +D +T L NLI    GNTLDSIFSHC N S    D    D  + GSSV LRQRE+
Sbjct: 8   GTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSCSVIDGVDFDPAV-GSSVYLRQREV 67

Query: 70  LQT-----KMNGSTDLFLQAQEFIYH------SSGKKKFYRGVRQR 100
           LQ      K NGS DLF +A E +Y       S GK+K YRGVRQR
Sbjct: 68  LQRFSQERKANGSRDLFAKAYELLYSGCGAAVSGGKRKVYRGVRQR 112

[Close]

BLAST of MC08g2272 vs. ExPASy TrEMBL
Match: A0A6J1K5K2 (ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661 GN=LOC111490954 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.37e-15
Identity = 52/105 (49.52%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 10  GQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVSDTGALDLGIE---GSSVCLRQRELL 69
           G    +D +T L NLI    GNTLDSIFSHC N S +    +  E   GSSV LRQRE+L
Sbjct: 8   GTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSRSVIDGVDFEQAVGSSVYLRQREVL 67

Query: 70  QT-----KMNGSTDLFLQAQEFIYHS------SGKKKFYRGVRQR 100
           Q      K NGS DLF +A E +Y         GK+K YRGVRQR
Sbjct: 68  QRFSQERKANGSRDLFAKAYEVLYSGCGAAVGGGKRKVYRGVRQR 112

[Close]

BLAST of MC08g2272 vs. ExPASy TrEMBL
Match: A0A0A0KMF6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150420 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.23e-14
Identity = 57/114 (50.00%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 1   MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGNVSD-TGALDLG-IEGSSV 60
           M+NT +L+FG T+VS   T L NLI    GNTLDSI SH  N+S  T + D     GSSV
Sbjct: 4   MINTPNLQFGLTDVS---TALSNLILTGGGNTLDSILSHYENLSSVTDSRDFQPAAGSSV 63

Query: 61  CLRQRELLQT-----KMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
            L+QRE+LQ      K NGS DLF +A E +Y  SG      ++K YRGVRQR+
Sbjct: 64  YLQQREVLQKFSQDRKSNGSRDLFSRAYELLYSRSGAAVNGGERKIYRGVRQRH 114

[Close]

BLAST of MC08g2272 vs. ExPASy TrEMBL
Match: A0A6J1I4G2 (ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661 GN=LOC111469073 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.25e-14
Identity = 57/115 (49.57%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 1   MMNTTSLRFGQTNVSDETTTLLNLIFLVKGNTLDSIFSHCGN---VSDTGALDLGIEGSS 60
           MMN T L+F  T+VS   T L NLI    GNTLDSIFSHC N   V+D G     + GSS
Sbjct: 4   MMNRTDLQFQLTDVS---TALSNLILTGGGNTLDSIFSHCENLTSVNDGGDFVRPV-GSS 63

Query: 61  VCLRQRELLQT-----KMNGSTDLFLQAQEFIYHSSG------KKKFYRGVRQRY 101
           V L+Q+E+L+      K NGS DLF +A E +Y  SG      ++K YRGVRQR+
Sbjct: 64  VYLQQQEVLKRFSENDKPNGSRDLFSRAYELLYSRSGAAVGGGERKLYRGVRQRH 114

The following BLAST results are available for this feature:

BLAST of MC08g2272 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g2272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146001.1	4.05e-25	61.95	ethylene-responsive transcription factor ERF061-like [Momordica charantia]	[more]
KAG7017013.1	1.31e-15	50.43	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6579553.1	1.36e-15	50.43	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6605566.1	3.52e-15	50.94	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022958007.1	4.71e-15	50.94	ethylene-responsive transcription factor ERF061-like [Cucurbita moschata]	[more]

BLAST of MC08g2272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY24	1.96e-25	61.95	ethylene-responsive transcription factor ERF061-like OS=Momordica charantia OX=3...	[more]
A0A6J1H0R0	2.28e-15	50.94	ethylene-responsive transcription factor ERF061-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K5K2	4.37e-15	49.52	ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KMF6	1.23e-14	50.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150420 PE=...	[more]
A0A6J1I4G2	1.25e-14	49.57	ethylene-responsive transcription factor ERF061-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of MC08g2272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2272.1	MC08g2272.1	mRNA