Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAGGCTTTGTTTGGATGAGTCCACAGGCCTTCTGCCAGTGACAATTTCTAAGAGAAGAACTCCAAAGGCGAATACGTCTGTTTTCTCATCCACTAAACCGTGCATGAAATATTCTGGAGCCAAGTACCCAAACGTGCCCTCTATTGGAACCACTGCATGGTGTGTCCATTTGTTTGGAAGCCATTTTGCTAGCCCAAAGTCCGTTATC
mRNA sequence
AGAAGGCTTTGTTTGGATGAGTCCACAGGCCTTCTGCCAGTGACAATTTCTAAGAGAAGAACTCCAAAGGCGAATACGTCTGTTTTCTCATCCACTAAACCGTGCATGAAATATTCTGGAGCCAAGTACCCAAACGTGCCCTCTATTGGAACCACTGCATGGTGTGTCCATTTGTTTGGAAGCCATTTTGCTAGCCCAAAGTCCGTTATC
Coding sequence (CDS)
AGAAGGCTTTGTTTGGATGAGTCCACAGGCCTTCTGCCAGTGACAATTTCTAAGAGAAGAACTCCAAAGGCGAATACGTCTGTTTTCTCATCCACTAAACCGTGCATGAAATATTCTGGAGCCAAGTACCCAAACGTGCCCTCTATTGGAACCACTGCATGGTGTGTCCATTTGTTTGGAAGCCATTTTGCTAGCCCAAAGTCCGTTATC
Protein sequence
RRLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKYPNVPSIGTTAWCVHLFGSHFASPKSVI
Homology
BLAST of MC08g2105 vs. NCBI nr
Match:
RRT86215.1 (hypothetical protein B296_00000401 [Ensete ventricosum])
HSP 1 Score: 66.2 bits (160), Expect = 1.19e-10
Identity = 41/85 (48.24%), Postives = 44/85 (51.76%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAK------------------- 56
+L + STG LP IS R+TPKA TSVFSST PCMKYSGAK
Sbjct: 8 KLLWEPSTGFLPDMISSRKTPKAKTSVFSSTMPCMKYSGAKHLRRHRQLPCRFRALMPIL 67
BLAST of MC08g2105 vs. NCBI nr
Match:
RWW27809.1 (hypothetical protein GW17_00007741 [Ensete ventricosum] >RWW70519.1 hypothetical protein BHE74_00021784 [Ensete ventricosum] >RZR77056.1 hypothetical protein BHM03_00002032 [Ensete ventricosum])
HSP 1 Score: 60.8 bits (146), Expect = 2.25e-09
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKY 43
+L + STG LP IS R+TPKA TSVFSST PCMKYSGAK+
Sbjct: 8 KLLWEPSTGFLPDMISSRKTPKAKTSVFSSTMPCMKYSGAKH 49
BLAST of MC08g2105 vs. NCBI nr
Match:
CAA2616312.1 (unnamed protein product [Spirodela intermedia] >CAA7391415.1 unnamed protein product [Spirodela intermedia])
HSP 1 Score: 51.6 bits (122), Expect = 1.32e-06
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query: 10 GLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKYPNVPS 48
G PVT S+R TP TS+FS T P MKYSGA+YP VP+
Sbjct: 32 GFRPVTSSRRTTPNEYTSIFSLTFPYMKYSGARYPKVPT 70
BLAST of MC08g2105 vs. NCBI nr
Match:
AFK41482.1 (unknown [Lotus japonicus])
HSP 1 Score: 48.1 bits (113), Expect = 7.42e-05
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 0
Query: 13 PVTISKRRTPKANTSVFSSTKPCMKYSGAKYPNVPS---IGTTAWCVHLFGSHFASPKSV 70
P ISKR TP A TS+ +P +KYSGA+YP VP+ + T+ V F + FA+PKS
Sbjct: 38 PDIISKRTTPNAYTSLLVVARPLLKYSGARYPYVPTTLVVDTSPSFV--FPTSFANPKSE 96
BLAST of MC08g2105 vs. NCBI nr
Match:
ACR37127.1 (unknown [Zea mays])
HSP 1 Score: 47.0 bits (110), Expect = 8.53e-05
Identity = 27/48 (56.25%), Postives = 29/48 (60.42%), Query Frame = 0
Query: 21 TPKANTSVFSSTKPCMKYSGAKYPNVPSIGTTAWCVHLFGSHFASPKS 68
TPK NTS FS + P YSGAKYP VP W V L +FASPKS
Sbjct: 2 TPKENTSNFSVSLPDAAYSGAKYPKVPITLVETW-VLLLVVNFASPKS 48
BLAST of MC08g2105 vs. ExPASy TrEMBL
Match:
A0A0A9D0U2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 4.88e-25
Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKYPNVPSIGTTAWCVHLFGS 61
RL + STG P S+R+TPKANTSVFSST PC+KYSGA++PNVPS+G AWCVH GS
Sbjct: 2 RLLWEPSTGFRPEMSSRRKTPKANTSVFSSTMPCVKYSGARHPNVPSMGAMAWCVHSDGS 61
Query: 62 HFASPKSVI 70
H A PKS I
Sbjct: 62 HRARPKSEI 70
BLAST of MC08g2105 vs. ExPASy TrEMBL
Match:
A0A0A9NXH5 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 5.71e-24
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKYPNVPSIGTTAWCVHLFGS 61
RL D STG P S+R+TP ANTSVFSST PC+KYSGA++P VPS+G AWCVH GS
Sbjct: 2 RLLWDPSTGFRPEMSSRRKTPNANTSVFSSTMPCVKYSGARHPKVPSMGAMAWCVHSDGS 61
Query: 62 HFASPKSVI 70
H A PKS I
Sbjct: 62 HRARPKSEI 70
BLAST of MC08g2105 vs. ExPASy TrEMBL
Match:
A0A0A9HGN4 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 1.02e-11
Identity = 35/63 (55.56%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKYPNVPSIGTTAWCVHLFGS 61
RL L T PV S+R TP ANTSVFS PC+ YSG YPNVPS T CV GS
Sbjct: 45 RLSLAAWTARRPVRSSRRTTPSANTSVFSLNTPCVVYSGGTYPNVPSKTVTWRCVRFAGS 104
Query: 62 HFA 64
H A
Sbjct: 105 HRA 107
BLAST of MC08g2105 vs. ExPASy TrEMBL
Match:
A0A427BCG3 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00000401 PE=4 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 5.78e-11
Identity = 41/85 (48.24%), Postives = 44/85 (51.76%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAK------------------- 56
+L + STG LP IS R+TPKA TSVFSST PCMKYSGAK
Sbjct: 8 KLLWEPSTGFLPDMISSRKTPKAKTSVFSSTMPCMKYSGAKHLRRHRQLPCRFRALMPIL 67
BLAST of MC08g2105 vs. ExPASy TrEMBL
Match:
A0A444FYV7 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00007741 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.09e-09
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 2 RLCLDESTGLLPVTISKRRTPKANTSVFSSTKPCMKYSGAKY 43
+L + STG LP IS R+TPKA TSVFSST PCMKYSGAK+
Sbjct: 8 KLLWEPSTGFLPDMISSRKTPKAKTSVFSSTMPCMKYSGAKH 49
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
RRT86215.1 | 1.19e-10 | 48.24 | hypothetical protein B296_00000401 [Ensete ventricosum] | [more] |
RWW27809.1 | 2.25e-09 | 69.05 | hypothetical protein GW17_00007741 [Ensete ventricosum] >RWW70519.1 hypothetical... | [more] |
CAA2616312.1 | 1.32e-06 | 61.54 | unnamed protein product [Spirodela intermedia] >CAA7391415.1 unnamed protein pro... | [more] |
AFK41482.1 | 7.42e-05 | 47.54 | unknown [Lotus japonicus] | [more] |
ACR37127.1 | 8.53e-05 | 56.25 | unknown [Zea mays] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A9D0U2 | 4.88e-25 | 66.67 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
A0A0A9NXH5 | 5.71e-24 | 65.22 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
A0A0A9HGN4 | 1.02e-11 | 55.56 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
A0A427BCG3 | 5.78e-11 | 48.24 | Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00000401 PE=4 SV=1 | [more] |
A0A444FYV7 | 1.09e-09 | 69.05 | Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00007741 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |