MC08g1778 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1778
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Calcium-binding EF-hand family protein
Location	MC08: 25869168 .. 25869413 (+)
RNA-Seq Expression	MC08g1778
Synteny	MC08g1778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAG

mRNA sequence

ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAG

Coding sequence (CDS)

ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAG

Protein sequence

MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGFISLDEFSDFAKDNRALMKDFAK

Homology

[Close]

BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: P69199 (Polcalcin Bra r 2 OS=Brassica campestris OX=3711 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-19
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA+ELGDALK  G V+ +D K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
          +IS  EFSDFA  NR LMKD AK
Sbjct: 61 YISYQEFSDFASANRGLMKDVAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: P69198 (Polcalcin Bra n 2 OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-19
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA+ELGDALK  G V+ +D K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
          +IS  EFSDFA  NR LMKD AK
Sbjct: 61 YISYQEFSDFASANRGLMKDVAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.0e-19
Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD       E ER+FKRFDANGDGKISA ELG+ALK  G ++ ++ K MM  ID DGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
          FIS  EF+DF + NR L+KD AK
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAK 83

[Close]

BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: Q9SRP7 (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana OX=3702 GN=CML28 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.6e-19
Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA ELGDALK  G V+ ED K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
          +IS  EF DFA  NR LMKD AK
Sbjct: 61 YISYQEFIDFASANRGLMKDVAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-18
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD       E ER+FK FDANGDGKISA+ELGDALK  G V+ ++ K MM  ID DGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
          FIS  EF++FA+ NR L+KD AK
Sbjct: 61 FISFQEFTNFARANRGLVKDVAK 83

[Close]

BLAST of MC08g1778 vs. NCBI nr
Match: XP_022143412.1 (polcalcin Bra n 2-like [Momordica charantia])

HSP 1 Score: 162 bits (411), Expect = 2.63e-50
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF
Sbjct: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          ISLDEFSDFAKDNRALMKDFAK
Sbjct: 61 ISLDEFSDFAKDNRALMKDFAK 82

[Close]

BLAST of MC08g1778 vs. NCBI nr
Match: XP_016902062.1 (PREDICTED: polcalcin Bra n 2-like [Cucumis melo])

HSP 1 Score: 139 bits (351), Expect = 3.65e-41
Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADS GV++ +CER+FKRFDANGDGKISATELGDAL GFGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MADS-GVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EFSDFAKDNRALMKDFAK
Sbjct: 61 ISFQEFSDFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. NCBI nr
Match: XP_038874793.1 (probable calcium-binding protein CML28 [Benincasa hispida])

HSP 1 Score: 136 bits (343), Expect = 6.06e-40
Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 5  SGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGFISLD 64
          SGVSA +CER+FKRFDANGDGKISATELGDAL GFGVS EDAK MMDAIDKDGDG IS +
Sbjct: 4  SGVSAADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFE 63

Query: 65 EFSDFAKDNRALMKDFAK 82
          EF++FAKDNRALMKDFAK
Sbjct: 64 EFAEFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. NCBI nr
Match: XP_022948513.1 (probable calcium-binding protein CML28 [Cucurbita moschata] >XP_022998721.1 probable calcium-binding protein CML28 [Cucurbita maxima] >XP_023523664.1 probable calcium-binding protein CML28 [Cucurbita pepo subsp. pepo] >KAG6607008.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036707.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132 bits (333), Expect = 2.03e-38
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD+ GV + ECER+FKRFDANGDG+ISATELGDAL G GVS+EDAK MMDAIDKDGDGF
Sbjct: 1  MADN-GVDSAECERIFKRFDANGDGQISATELGDALNGIGVSSEDAKRMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EF +FAKDNRALMKDFAK
Sbjct: 61 ISFQEFFEFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. NCBI nr
Match: XP_004149790.1 (probable calcium-binding protein CML28 [Cucumis sativus] >KGN57835.1 hypothetical protein Csa_010503 [Cucumis sativus])

HSP 1 Score: 130 bits (327), Expect = 1.67e-37
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADS GV++ + ER+FKRFDANGDGKISATELGDAL  FGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MADS-GVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EF DFAKDNRALMKDFAK
Sbjct: 61 ISFQEFFDFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A6J1CQR0 (polcalcin Bra n 2-like OS=Momordica charantia OX=3673 GN=LOC111013292 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.27e-50
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF
Sbjct: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          ISLDEFSDFAKDNRALMKDFAK
Sbjct: 61 ISLDEFSDFAKDNRALMKDFAK 82

[Close]

BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A1S4E1G1 (polcalcin Bra n 2-like OS=Cucumis melo OX=3656 GN=LOC103496835 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.77e-41
Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADS GV++ +CER+FKRFDANGDGKISATELGDAL GFGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MADS-GVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EFSDFAKDNRALMKDFAK
Sbjct: 61 ISFQEFSDFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A6J1KB11 (probable calcium-binding protein CML28 OS=Cucurbita maxima OX=3661 GN=LOC111493300 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 9.85e-39
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD+ GV + ECER+FKRFDANGDG+ISATELGDAL G GVS+EDAK MMDAIDKDGDGF
Sbjct: 1  MADN-GVDSAECERIFKRFDANGDGQISATELGDALNGIGVSSEDAKRMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EF +FAKDNRALMKDFAK
Sbjct: 61 ISFQEFFEFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A6J1G9I0 (probable calcium-binding protein CML28 OS=Cucurbita moschata OX=3662 GN=LOC111452170 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 9.85e-39
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MAD+ GV + ECER+FKRFDANGDG+ISATELGDAL G GVS+EDAK MMDAIDKDGDGF
Sbjct: 1  MADN-GVDSAECERIFKRFDANGDGQISATELGDALNGIGVSSEDAKRMMDAIDKDGDGF 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EF +FAKDNRALMKDFAK
Sbjct: 61 ISFQEFFEFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A0A0L775 (Putative calcium-binding protein CML28 OS=Cucumis sativus OX=3659 GN=Csa_3G345360 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 8.10e-38
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGF 60
          MADS GV++ + ER+FKRFDANGDGKISATELGDAL  FGVS+EDAK MMDAIDKDGDG+
Sbjct: 1  MADS-GVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGY 60

Query: 61 ISLDEFSDFAKDNRALMKDFAK 82
          IS  EF DFAKDNRALMKDFAK
Sbjct: 61 ISFQEFFDFAKDNRALMKDFAK 81

[Close]

BLAST of MC08g1778 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 94.4 bits (233), Expect = 4.7e-20
Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA ELGDALK  G V+ ED K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
          +IS  EF DFA  NR LMKD AK
Sbjct: 61 YISYQEFIDFASANRGLMKDVAK 81

[Close]

BLAST of MC08g1778 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 )

HSP 1 Score: 87.0 bits (214), Expect = 7.5e-18
Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 1  MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFG-VSTEDAKTMMDAIDKDGDG 60
          MAD++     E +R+FK+FDANGDGKISA EL +ALK  G V+ +D K MM  ID DGDG
Sbjct: 1  MADAT--EKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDG 60

Query: 61 FISLDEFSDFAKDNRALMKDFAK 83
           IS  EF+DFA  NR LMKD AK
Sbjct: 61 NISYQEFTDFAGANRGLMKDVAK 81

[Close]

BLAST of MC08g1778 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 60.5 bits (145), Expect = 7.5e-10
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 11 ECERVFKRFDANGDGKISATELGDALKGFGVS--TEDAKTMMDAIDKDGDGFISLDEFSD 70
          E ++VF +FDANGDGKIS +ELG+  K  G S   E+   ++D ID D DGFI+ +EF+ 
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 71 FAKDNRALMK 79
            + + + ++
Sbjct: 80 ICRSSSSAVE 89

[Close]

BLAST of MC08g1778 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 10 EECERVFKRFDANGDGKISATELGDALKGFGVS-TE-DAKTMMDAIDKDGDGFISLDEFS 69
          EE ++VF +FD+NGDGKIS  ELG   K  G S TE +   +++ +D D DG+I+LDEFS
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 70 DFAKDN 74
             + +
Sbjct: 82 TLCRSS 87

[Close]

BLAST of MC08g1778 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 8  SAEECERVFKRFDANGDGKISATELGDALKGF--GVSTEDAKTMMDAIDKDGDGFISLDE 67
          S E+ ++VF+RFD N DGKIS  EL D +       S E+ K MM   D DG+GFI LDE
Sbjct: 12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 68 F------SDFAKDNRAL 77
          F      SD + +N A+
Sbjct: 72 FVALFQISDQSSNNSAI 88

The following BLAST results are available for this feature:

BLAST of MC08g1778 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69199	2.3e-19	63.86	Polcalcin Bra r 2 OS=Brassica campestris OX=3711 PE=1 SV=1	[more]
P69198	2.3e-19	63.86	Polcalcin Bra n 2 OS=Brassica napus OX=3708 PE=1 SV=1	[more]
Q39419	5.0e-19	60.24	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]
Q9SRP7	6.6e-19	63.86	Probable calcium-binding protein CML28 OS=Arabidopsis thaliana OX=3702 GN=CML28 ...	[more]
O81701	1.5e-18	61.45	Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1	[more]

BLAST of MC08g1778 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143412.1	2.63e-50	100.00	polcalcin Bra n 2-like [Momordica charantia]	[more]
XP_016902062.1	3.65e-41	85.37	PREDICTED: polcalcin Bra n 2-like [Cucumis melo]	[more]
XP_038874793.1	6.06e-40	85.90	probable calcium-binding protein CML28 [Benincasa hispida]	[more]
XP_022948513.1	2.03e-38	81.71	probable calcium-binding protein CML28 [Cucurbita moschata] >XP_022998721.1 prob...	[more]
XP_004149790.1	1.67e-37	81.71	probable calcium-binding protein CML28 [Cucumis sativus] >KGN57835.1 hypothetica...	[more]

BLAST of MC08g1778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQR0	1.27e-50	100.00	polcalcin Bra n 2-like OS=Momordica charantia OX=3673 GN=LOC111013292 PE=4 SV=1	[more]
A0A1S4E1G1	1.77e-41	85.37	polcalcin Bra n 2-like OS=Cucumis melo OX=3656 GN=LOC103496835 PE=4 SV=1	[more]
A0A6J1KB11	9.85e-39	81.71	probable calcium-binding protein CML28 OS=Cucurbita maxima OX=3661 GN=LOC1114933...	[more]
A0A6J1G9I0	9.85e-39	81.71	probable calcium-binding protein CML28 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0L775	8.10e-38	81.71	Putative calcium-binding protein CML28 OS=Cucumis sativus OX=3659 GN=Csa_3G34536...	[more]

BLAST of MC08g1778 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03430.1	4.7e-20	63.86	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	7.5e-18	60.24	pollen calcium-binding protein 1	[more]
AT1G73630.1	7.5e-10	42.86	EF hand calcium-binding protein family	[more]
AT1G18210.1	2.2e-09	46.97	Calcium-binding EF-hand family protein	[more]
AT1G66400.1	2.2e-09	45.45	calmodulin like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 11..39 e-value: 1.2E-4 score: 31.4 coord: 45..73 e-value: 0.0097 score: 25.1
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 10..70 e-value: 9.8E-13 score: 48.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 44..76 score: 12.504936
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 7..42 score: 15.685013
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 11..71 e-value: 1.3096E-14 score: 59.8689
None	No IPR available	GENE3D	1.10.238.10		coord: 2..78 e-value: 3.5E-21 score: 77.9
None	No IPR available	PANTHER	PTHR23064	TROPONIN	coord: 11..82
None	No IPR available	PANTHER	PTHR23064:SF60	POLCALCIN NIC T 1	coord: 11..82
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 20..32
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 9..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1778.1	MC08g1778.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding