MC08g1778 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAG ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAG ATGGCGGATAGTAGCGGCGTAAGCGCAGAGGAATGCGAGCGAGTGTTCAAGCGATTCGACGCGAACGGCGACGGGAAGATATCGGCGACGGAGCTGGGAGACGCATTGAAGGGGTTCGGAGTGAGCACTGAGGACGCGAAGACGATGATGGACGCCATTGATAAGGATGGCGATGGATTCATTTCGCTGGATGAGTTCTCGGATTTCGCCAAGGACAATCGCGCCTTGATGAAGGATTTCGCCAAG MADSSGVSAEECERVFKRFDANGDGKISATELGDALKGFGVSTEDAKTMMDAIDKDGDGFISLDEFSDFAKDNRALMKDFAK Homology
BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: P69199 (Polcalcin Bra r 2 OS=Brassica campestris OX=3711 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.3e-19 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: P69198 (Polcalcin Bra n 2 OS=Brassica napus OX=3708 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.3e-19 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 5.0e-19 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: Q9SRP7 (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana OX=3702 GN=CML28 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.6e-19 Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-18 Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of MC08g1778 vs. NCBI nr
Match: XP_022143412.1 (polcalcin Bra n 2-like [Momordica charantia]) HSP 1 Score: 162 bits (411), Expect = 2.63e-50 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MC08g1778 vs. NCBI nr
Match: XP_016902062.1 (PREDICTED: polcalcin Bra n 2-like [Cucumis melo]) HSP 1 Score: 139 bits (351), Expect = 3.65e-41 Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of MC08g1778 vs. NCBI nr
Match: XP_038874793.1 (probable calcium-binding protein CML28 [Benincasa hispida]) HSP 1 Score: 136 bits (343), Expect = 6.06e-40 Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of MC08g1778 vs. NCBI nr
Match: XP_022948513.1 (probable calcium-binding protein CML28 [Cucurbita moschata] >XP_022998721.1 probable calcium-binding protein CML28 [Cucurbita maxima] >XP_023523664.1 probable calcium-binding protein CML28 [Cucurbita pepo subsp. pepo] >KAG6607008.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036707.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 132 bits (333), Expect = 2.03e-38 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of MC08g1778 vs. NCBI nr
Match: XP_004149790.1 (probable calcium-binding protein CML28 [Cucumis sativus] >KGN57835.1 hypothetical protein Csa_010503 [Cucumis sativus]) HSP 1 Score: 130 bits (327), Expect = 1.67e-37 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A6J1CQR0 (polcalcin Bra n 2-like OS=Momordica charantia OX=3673 GN=LOC111013292 PE=4 SV=1) HSP 1 Score: 162 bits (411), Expect = 1.27e-50 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A1S4E1G1 (polcalcin Bra n 2-like OS=Cucumis melo OX=3656 GN=LOC103496835 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 1.77e-41 Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A6J1KB11 (probable calcium-binding protein CML28 OS=Cucurbita maxima OX=3661 GN=LOC111493300 PE=4 SV=1) HSP 1 Score: 132 bits (333), Expect = 9.85e-39 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A6J1G9I0 (probable calcium-binding protein CML28 OS=Cucurbita moschata OX=3662 GN=LOC111452170 PE=4 SV=1) HSP 1 Score: 132 bits (333), Expect = 9.85e-39 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of MC08g1778 vs. ExPASy TrEMBL
Match: A0A0A0L775 (Putative calcium-binding protein CML28 OS=Cucumis sativus OX=3659 GN=Csa_3G345360 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 8.10e-38 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of MC08g1778 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 94.4 bits (233), Expect = 4.7e-20 Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of MC08g1778 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 ) HSP 1 Score: 87.0 bits (214), Expect = 7.5e-18 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of MC08g1778 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 60.5 bits (145), Expect = 7.5e-10 Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of MC08g1778 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09 Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of MC08g1778 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 ) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09 Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|