MC06g1037 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1037
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionpentatricopeptide repeat-containing protein At1g62350
LocationMC06: 9977747 .. 9981479 (+)
RNA-Seq ExpressionMC06g1037
SyntenyMC06g1037
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATGACATAGTTAAGACATCACTGAAAACAAGAATTACTCTCAACTTCAAGCATTACCCCAATAAAAAAGAGGGGAAAAAAAGAAGAAAAAACTCTTCAAGCATCACTTGCTATGCTACAGAACCCCCGCCCATTTCTCTTGGGTTTTAACAAGAGCGCAAAATTCTGTTGCAGTATCTCGCTCCAAGGTTCTTCCAGATTTGATGCTGCGTCTTGTTCCAAATCTTCTTCGAAGAGCGCCAAATAGGGTCACTCGCACTGCCACAATCCCCTTCCATCTCTCTTCCCCAATCACATTCTTCGATCGCGATCAGTTACAGCAACAATCGCTCTTCCGGTTCATCACTGGCTCCGCTTCGAGCCCTAGCCTCTCCATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTTTGATTGTGGTTAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTCGTCGCCGTTCTCGTCGAGCTTCAGAGACAGAAACAGGTCTTTCTGTGCATGAAGGTATATCCTCTTCTGCTCTCTCTATCTGTCTCTCTCTATGCTGAAAGTTATATGGTTGTTTCTGAAGGGCCATCAATGGAATGTGAGTTTGATAGGTTTCTTGCTATAATATGTTGGGTTAATCCAGAATTCGAGTTGTTTGGATGGACTACTTATATAGGGATCATTTTGAATGATCGAACCTTAGCATTATTGGATAGGACGTAATATGGGTATGCTCTTCGTATTTGGTTTTTATCTACGTTTAGGTTTTGGGGAAGATTACATGTCCTAGTATTTGATAATTGCATTCTGAAGTGGAAAAAGTCATGTTCAAATTCAAATGTAGAAAGATATAGCGAACTCTGGAAGTGTAGTTGGTTTGCTTAGGGATAAGTCTCGAGATCAGTTCAGTTGAATTAGGGGATTGGGTATAGGAAACTTGAGACTTTGTAATACGACTCAGTCGGCAAAATGGTAAAAGGGAAAGTAGAATTCATGCCAAAGGAATTGAAGAGAGTGTCCAGATGGAAGAGGCAAACTTGCAGTGGAGGAAAAGATGAGCTATCTTCACTCTCCTTGCACATAATGCACCAACCAGAAGATAAAGTGACAAAAGGGTTCATGCTTCAATTTGTCTCGAGTGTCAATACCACTATGAAATGAGCACCAAGTGAAGATTTTGACTTTTTTTAGGACATTTAATCCTCCAAATGTTTGTTTTTTTTTCTTTTTTTTTTTGGATTACAGACAGTGTCACAATATATTAGGACTCCCAGAAGAAGGAAAAGAGCAACCTAAGGGCAGAGGGTGGAGATCACCCTTCCCAATAGACTAGACCATCACAACTTTCCATCATTCACAATAATTTGTAAGCTATAATTGCAAAAGAAATTCTTGTGGTTTGTAGATCACCAAGAAGCTAAATGATGTACATTCAAACAAAAATAATTCTCTAAGGAAGGATAACCCGCCAAATGTAATTGCAAGTAAGAGCAAGGAAAGGCCTTAACCAGATTCAAGATAAGTATTTGGTGAATAAATAGCCAGAACCATCAGAATGCCACGACCAAGAATCACTAGAAGATCCTGGGAGAAATTGAGGATCGACTTCATGACATGTGGTCATTCAAGAGCTTCTCTATCATTGAATTTGAGGTTTCTTCTGAAGCAAAGATCCAAAGAAGAGAAGGTAAAATTCCAGTATTGATGAAAGAAGGTCTCCTTTGAGAAGAGCTAGTAGAGTTTCGGGGAGAACAATGGGGTGAATTTCCTTTTCAGATTATTCTTGCTATTATGGCCGCAAACTCTGATTTTGTTAGCTAAAACCTTCTATGGGTTAAAGATAGCTCGCCAAGCACCTGTTGGAGAATTAGATTTAGAACTAGCAATAATTTCCTTTATAGGCAACCTGGGTATAATTCAACTAGTTAAAGTCATATATCCTCGACCAAAAGGTTTGAGGTTAAAATACCCTTGAGCTAAAAAAGAAAAGCAATAATTTTTAAGAGAGAGATGTCTCTCTCTTTCAGATTTCCGAGACCGAGACCATCAAGCTTCATCGGAAGCTTCACCATTTTCAGTTTATCAGATTGCAAGTTTCCTAACATTGGATGTCATTGGGTCAAGAGGACTACTTTTGGTAGAGAAAAATAAGAAAATCTGCATTTTGGAAGTATGCCAGCATTTTCAACGTCAACATGCTCTATAATACGAGTTTTTTGTTTTCTTGGAAGTGAGATCCACATAAAAATGTGATGCATCTATTAGAAACAGAAAATTATAGTATTGTATTGCCAACATAGGGTGTAACATAAGATGAATTGCTATAACTGAGCACGTATATGTCTCCTTTAGACAATAAAGTAATTTAACAAATAAAGATCTACTTATGCGTAATCATGTACCTTTTAGTAAAATAAATAGAAATTTACTTATTCCTAATCATGTTTTTCTTGTTGGGAATTTGACTAATCTACAATACTTTGTTGCCCTTTTGTGTTGAAGAGATATTGAACAAGAAGGTTGAAAACATTAGGTGACTGGAAATGAGGCAAAATTGTTTGTTTGGTTCCCAATTGGCTTTGAAGGACCTACTCTATTTCCAGTTATATTTCTTTTAAAATGGTGCATGCCTTGAACATTCTATCCTAAAAAATTTTCTTTGAAACGTCTTAATAATCTAATCTATTGTCTTGGAAAACAATATTATCTTACTCTTGTAGTTTTGTTATTTAACCTTTAAAAAAAAAGTTATTTAACAAAATACACCATTTTTTTTATAGATATATACACATTACTCCTTTTTAGTTGAAATAAACCTTTGCTTTTGTCTCATTGATTGCATTGCTGACACATGCTTTTCCATTTCAGCTGTATAATGTGGTTCGTAAAGAAGTATGGTATCGTCCCGACATGTTCTTTTATAGAGACATGCTTATGATGCTATCGAAGAACAAAAAGGTGGAAGAAACAAAACAAGTTTGGCAGGATCTAAAAAGAGAGGAAGTGCTATTTGATCAGCATACTTTTGGAGATATTATTCGGGCATACTTGGATAATGGAATGCCCTCTGAGGCCATGGACATATATCGTGAAATGAGACAATCTCCTGATAGGCCATTATCCCTGCCCTTTCGTGTAATTTTGAAGGGGCTTATTCCATACCCAGAATTGAGAGAACAGATCAAAGACGACTTCTTGGAGCTTTTCCCTGATATGATCGTATACGACCCACCAGAAGACTTGTTTGAAGAGGATGAAGATAGAAAGAGGGAATATGATTAAGAGTGCCACTCATGCCGTCAATTCTTTATAACTTTTTCACAAAGGAAACTTTTCCTTGGCCATATCTGAACAAGTTGAGATCATTTGAATGTGTTGGCTATACCAGACTCTCGGTGGTGGCCTTGCATTTGAAGCTCCTTTTGCAAAATGATTCGATCTCGAAACATTTTTTTGCCTTTGAGGAATTATTCAAAGAATATTCATAGTTTCATCAATTTTGGGTTCGGTTATTTATTCAATTCTTTTTGAGAGGTAGGATTAGTGTCCTGTATCTTAACATGTCTTTTAGATTGTTTTTAGCTATAATTAATGTAAAATGCCTGTTTAGGACATGAAATTCAATGAAAAGAGTGTTTGGAACTGCTATTCTTATTTATGGTAGTGATTCAATGTTTATTAAGAA

mRNA sequence

GGATGACATAGTTAAGACATCACTGAAAACAAGAATTACTCTCAACTTCAAGCATTACCCCAATAAAAAAGAGGGGAAAAAAAGAAGAAAAAACTCTTCAAGCATCACTTGCTATGCTACAGAACCCCCGCCCATTTCTCTTGGGTTTTAACAAGAGCGCAAAATTCTGTTGCAGTATCTCGCTCCAAGGTTCTTCCAGATTTGATGCTGCGTCTTGTTCCAAATCTTCTTCGAAGAGCGCCAAATAGGGTCACTCGCACTGCCACAATCCCCTTCCATCTCTCTTCCCCAATCACATTCTTCGATCGCGATCAGTTACAGCAACAATCGCTCTTCCGGTTCATCACTGGCTCCGCTTCGAGCCCTAGCCTCTCCATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTTTGATTGTGGTTAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTCGTCGCCGTTCTCGTCGAGCTTCAGAGACAGAAACAGGTCTTTCTGTGCATGAAGCTGTATAATGTGGTTCGTAAAGAAGTATGGTATCGTCCCGACATGTTCTTTTATAGAGACATGCTTATGATGCTATCGAAGAACAAAAAGGTGGAAGAAACAAAACAAGTTTGGCAGGATCTAAAAAGAGAGGAAGTGCTATTTGATCAGCATACTTTTGGAGATATTATTCGGGCATACTTGGATAATGGAATGCCCTCTGAGGCCATGGACATATATCGTGAAATGAGACAATCTCCTGATAGGCCATTATCCCTGCCCTTTCGTGTAATTTTGAAGGGGCTTATTCCATACCCAGAATTGAGAGAACAGATCAAAGACGACTTCTTGGAGCTTTTCCCTGATATGATCGTATACGACCCACCAGAAGACTTGTTTGAAGAGGATGAAGATAGAAAGAGGGAATATGATTAAGAGTGCCACTCATGCCGTCAATTCTTTATAACTTTTTCACAAAGGAAACTTTTCCTTGGCCATATCTGAACAAGTTGAGATCATTTGAATGTGTTGGCTATACCAGACTCTCGGTGGTGGCCTTGCATTTGAAGCTCCTTTTGCAAAATGATTCGATCTCGAAACATTTTTTTGCCTTTGAGGAATTATTCAAAGAATATTCATAGTTTCATCAATTTTGGGTTCGGTTATTTATTCAATTCTTTTTGAGAGGTAGGATTAGTGTCCTGTATCTTAACATGTCTTTTAGATTGTTTTTAGCTATAATTAATGTAAAATGCCTGTTTAGGACATGAAATTCAATGAAAAGAGTGTTTGGAACTGCTATTCTTATTTATGGTAGTGATTCAATGTTTATTAAGAA

Coding sequence (CDS)

ATGCTGCGTCTTGTTCCAAATCTTCTTCGAAGAGCGCCAAATAGGGTCACTCGCACTGCCACAATCCCCTTCCATCTCTCTTCCCCAATCACATTCTTCGATCGCGATCAGTTACAGCAACAATCGCTCTTCCGGTTCATCACTGGCTCCGCTTCGAGCCCTAGCCTCTCCATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTTTGATTGTGGTTAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTCGTCGCCGTTCTCGTCGAGCTTCAGAGACAGAAACAGGTCTTTCTGTGCATGAAGCTGTATAATGTGGTTCGTAAAGAAGTATGGTATCGTCCCGACATGTTCTTTTATAGAGACATGCTTATGATGCTATCGAAGAACAAAAAGGTGGAAGAAACAAAACAAGTTTGGCAGGATCTAAAAAGAGAGGAAGTGCTATTTGATCAGCATACTTTTGGAGATATTATTCGGGCATACTTGGATAATGGAATGCCCTCTGAGGCCATGGACATATATCGTGAAATGAGACAATCTCCTGATAGGCCATTATCCCTGCCCTTTCGTGTAATTTTGAAGGGGCTTATTCCATACCCAGAATTGAGAGAACAGATCAAAGACGACTTCTTGGAGCTTTTCCCTGATATGATCGTATACGACCCACCAGAAGACTTGTTTGAAGAGGATGAAGATAGAAAGAGGGAATATGATTAA

Protein sequence

MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYDPPEDLFEEDEDRKREYD
Homology
[Close]
BLAST of MC06g1037 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.5e-82
Identity = 146/190 (76.84%), Postives = 170/190 (89.47%), Query Frame = 0 

Query: 65  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNV 124
           M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQ QVFLCMKLY V
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 125 VRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDNG 184
           VR+E+WYRPDMFFYRDMLMML++NKKV+ETK+VW+DLK+EEVLFDQHTFGD++R +LDN 
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 185 MPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYDPPED 244
           +P EAM +Y EMR+SPDRPLSLPFRVILKGL+PYPELRE++KDDFLELFP MIVYDPPED
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 245 LFEEDEDRKR 255
           + E+ ++  R
Sbjct: 181 ICEDSDEEAR 190

[Close]
BLAST of MC06g1037 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.0e-51
Identity = 93/202 (46.04%), Postives = 148/202 (73.27%), Query Frame = 0 

Query: 45  RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVA 104
           RF  G    P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++A
Sbjct: 56  RFHDGRPRGP---LWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLA 115

Query: 105 VLVELQRQKQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKRE 164
           V+ EL+RQ++  L +K++ V++K+ WY+PD+F Y+D+++ L+K+K+++E   +W+ +K+E
Sbjct: 116 VIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKE 175

Query: 165 EVLFDQHTFGDIIRAYLDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQ 224
            +  D  T+ ++IR +L +G P++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +
Sbjct: 176 NLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNK 235

Query: 225 IKDDFLELFPDMIVYDPPEDLF 247
           +K DF ELFP+   YDPPE++F
Sbjct: 236 VKKDFEELFPEKHAYDPPEEIF 254

[Close]
BLAST of MC06g1037 vs. ExPASy Swiss-Prot
Match: Q9ZVX5 (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 28/112 (25.00%), Postives = 58/112 (51.79%), Query Frame = 0 

Query: 133 PDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDNGMPSEAMDI 192
           PD   Y  +L  +SK  ++ + K++  D+K+  ++ ++ T+ +++  Y   G   EA  I
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 193 YREMRQSPDRPLSLPFRVILKGLIPYPELRE--QIKDDF--LELFPDMIVYD 241
              M+Q+   P    + +++ GL     +RE  ++ D    L+L PD++ Y+
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349

[Close]
BLAST of MC06g1037 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 31/120 (25.83%), Postives = 63/120 (52.50%), Query Frame = 0 

Query: 82  NLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNVVRK--EVWYRPDMFFYR 141
           NL    R++   + R+  + L+++  ++ R ++        +++R+   V  + D+  Y 
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL------DILREMASVGIKKDVVTYN 489

Query: 142 DMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDNGMPSEAMDIYREMRQS 200
            +L    K  K +E K+V+ ++KRE VL +  T+  +I  Y   G+  EAM+I+RE + +
Sbjct: 490 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543

[Close]
BLAST of MC06g1037 vs. ExPASy Swiss-Prot
Match: Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 37/136 (27.21%), Postives = 68/136 (50.00%), Query Frame = 0 

Query: 65  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNV 124
           +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ    L + + + 
Sbjct: 48  LSTEAIQSIQSLKRAHRTGVSLSLTLRP-LRRLIKSDLISVLRELLRQDYCTLAVHVLST 107

Query: 125 VRKEVWYRP-DMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDN 184
           +R E  Y P D+  Y D++  L++NK+ +E  ++  ++   +   D      +IRA +  
Sbjct: 108 LRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQRSDDKALAKLIRAVVGA 167

Query: 185 GMPSEAMDIYREMRQS 200
                 + +Y  MR+S
Sbjct: 168 ERRESVVRVYTLMRES 180

[Close]
BLAST of MC06g1037 vs. NCBI nr
Match: XP_022153223.1 (pentatricopeptide repeat-containing protein At1g62350 [Momordica charantia])

HSP 1 Score: 504 bits (1297), Expect = 1.00e-179
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR
Sbjct: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD
Sbjct: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDRKREYD 257
           PPEDLFEEDEDRKREYD
Sbjct: 241 PPEDLFEEDEDRKREYD 257

[Close]
BLAST of MC06g1037 vs. NCBI nr
Match: XP_023531705.1 (pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo] >XP_023531706.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422 bits (1084), Expect = 2.70e-147
Identity = 216/251 (86.06%), Postives = 229/251 (91.24%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLR  PNLLRR  NR T  +TI  +  +  TFF+  + QQQ L RFITGSASSPSLS+WR
Sbjct: 1   MLRFAPNLLRRFSNRAT--STIHLYRFTHCTFFEHHRPQQQLLLRFITGSASSPSLSVWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ QVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK E VLFDQHTFGDI+RAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN MPSEAMDIYREMRQSPDRPLSLPFRVILKGL+PYPELREQ+KDDFLELFPDMIVYD
Sbjct: 181 LDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDED 251
           PPEDLFEEDED
Sbjct: 241 PPEDLFEEDED 249

[Close]
BLAST of MC06g1037 vs. NCBI nr
Match: XP_022966084.1 (pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima] >XP_022966085.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima])

HSP 1 Score: 420 bits (1079), Expect = 1.56e-146
Identity = 216/252 (85.71%), Postives = 229/252 (90.87%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLR  PNLLRR  N  + T+TI  +  +  TFF+  + QQQ L RFITGSASSPSLSIWR
Sbjct: 1   MLRFAPNLLRRISN--SATSTIHLYRFTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ QVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDML ML+KNK+VEETKQVW+DLK E VLFDQHTFGDI+RAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLTMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN MPSEAMDIYREMRQSPDRPLSLPFRVILKGL+PYPELREQ++DDFLELFPDMIVYD
Sbjct: 181 LDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVRDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDR 252
           PPEDLFEEDEDR
Sbjct: 241 PPEDLFEEDEDR 250

[Close]
BLAST of MC06g1037 vs. NCBI nr
Match: XP_004139064.1 (pentatricopeptide repeat-containing protein At1g62350 isoform X1 [Cucumis sativus] >KAE8653533.1 hypothetical protein Csa_007495 [Cucumis sativus])

HSP 1 Score: 420 bits (1079), Expect = 1.62e-146
Identity = 218/257 (84.82%), Postives = 231/257 (89.88%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLRL PNLLR+  +  +  ++ PFH  S  TF + D LQQQ L RFITGSASSPSLSIWR
Sbjct: 1   MLRLAPNLLRKISS--SPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDLVAVLVELQRQ  VFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK+E VLFDQHTFGDIIRAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN M SEAMDIYREMR+SPDRPLSLPFRVILKGLIPYPELREQ+KDDFLELFPDMIVYD
Sbjct: 181 LDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDRKREYD 257
           PPEDLFEEDEDR +  D
Sbjct: 241 PPEDLFEEDEDRNKSED 255

[Close]
BLAST of MC06g1037 vs. NCBI nr
Match: KAG7022139.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421 bits (1081), Expect = 2.61e-146
Identity = 216/251 (86.06%), Postives = 229/251 (91.24%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLR  PNLLRR  N  + T+TI  +  +  TFF+  + QQQ L RFITGSASSPSLSIWR
Sbjct: 35  MLRFAPNLLRRFSN--SATSTIHLYRFTDCTFFEHHRPQQQLLLRFITGSASSPSLSIWR 94

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ QVFLCMK
Sbjct: 95  RKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMK 154

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK E VLFDQHTFGDI+RAY
Sbjct: 155 LYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAY 214

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN MPSEAMDIYREMRQSPDRPLSLPFRVILKGL+PYPELREQ+KDDFLELFPDMIVYD
Sbjct: 215 LDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYD 274

Query: 241 PPEDLFEEDED 251
           PPEDLFEEDED
Sbjct: 275 PPEDLFEEDED 283

[Close]
BLAST of MC06g1037 vs. ExPASy TrEMBL
Match: A0A6J1DGX4 (pentatricopeptide repeat-containing protein At1g62350 OS=Momordica charantia OX=3673 GN=LOC111020768 PE=4 SV=1)

HSP 1 Score: 504 bits (1297), Expect = 4.86e-180
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR
Sbjct: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD
Sbjct: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDRKREYD 257
           PPEDLFEEDEDRKREYD
Sbjct: 241 PPEDLFEEDEDRKREYD 257

[Close]
BLAST of MC06g1037 vs. ExPASy TrEMBL
Match: A0A6J1HQL7 (pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita maxima OX=3661 GN=LOC111465833 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 7.55e-147
Identity = 216/252 (85.71%), Postives = 229/252 (90.87%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLR  PNLLRR  N  + T+TI  +  +  TFF+  + QQQ L RFITGSASSPSLSIWR
Sbjct: 1   MLRFAPNLLRRISN--SATSTIHLYRFTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ QVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDML ML+KNK+VEETKQVW+DLK E VLFDQHTFGDI+RAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLTMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN MPSEAMDIYREMRQSPDRPLSLPFRVILKGL+PYPELREQ++DDFLELFPDMIVYD
Sbjct: 181 LDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVRDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDR 252
           PPEDLFEEDEDR
Sbjct: 241 PPEDLFEEDEDR 250

[Close]
BLAST of MC06g1037 vs. ExPASy TrEMBL
Match: A0A1S3BQ11 (pentatricopeptide repeat-containing protein At1g62350 OS=Cucumis melo OX=3656 GN=LOC103491974 PE=4 SV=1)

HSP 1 Score: 419 bits (1077), Expect = 1.58e-146
Identity = 217/257 (84.44%), Postives = 230/257 (89.49%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLRL PNLLR+  +  +  ++ PFH  S  TF + D LQQQ L RFI GSASSPSLSIWR
Sbjct: 1   MLRLAPNLLRKISS--SPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDLVAVLVELQRQ  VFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK+E VLFDQHTFGDIIRAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN M SEAMDIYREMR+SPDRPLSLPFRVILKGLIPYPELREQ+KDDFLELFPDMIVYD
Sbjct: 181 LDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDRKREYD 257
           PPEDLFEEDEDR +  D
Sbjct: 241 PPEDLFEEDEDRNKSED 255

[Close]
BLAST of MC06g1037 vs. ExPASy TrEMBL
Match: A0A6J1EQI1 (pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita moschata OX=3662 GN=LOC111436516 PE=4 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 4.36e-146
Identity = 215/250 (86.00%), Postives = 228/250 (91.20%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60
           MLR  PNLLRR  N  + T+TI  +  +  TFF+  + QQQ L RFITGSASSPSLSIWR
Sbjct: 1   MLRFAPNLLRRFSN--SATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120
           RKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ QVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK E VLFDQHTFGDI+RAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAY 180

Query: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240
           LDN MPSEAMDIYREMRQSPDRPLSLPFRVILKGL+PYPELREQ+KDDFLELFPDMIVYD
Sbjct: 181 LDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDE 250
           PPEDLFEEDE
Sbjct: 241 PPEDLFEEDE 248

[Close]
BLAST of MC06g1037 vs. ExPASy TrEMBL
Match: A0A2I4F1J6 (pentatricopeptide repeat-containing protein At1g62350 OS=Juglans regia OX=51240 GN=LOC108994666 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 9.12e-124
Identity = 184/257 (71.60%), Postives = 214/257 (83.27%), Query Frame = 0 

Query: 1   MLRLVPNLLRRAP-NRVTRTATIPFHLSSPITFFDR--DQLQQQSLFRFITGSASSPSLS 60
           MLR   NL R+   +  TR  + PF  + P+   D      QQ+   R++ GSASSPSLS
Sbjct: 1   MLRQAQNLFRKTSFSTTTRLPSSPFSPNFPLLLQDTFSKNHQQKWFLRYVAGSASSPSLS 60

Query: 61  IWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFL 120
           IWRR+KEMGKEGLIV KELKRL+ N +RLDRFI SHVSRLLKSDL+AVL E QRQ Q+ L
Sbjct: 61  IWRRRKEMGKEGLIVAKELKRLRFNQLRLDRFIRSHVSRLLKSDLLAVLAEFQRQDQILL 120

Query: 121 CMKLYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDII 180
           CMKLY+VVRKE+WYRPDM+FYRDMLMML++NKKV+E KQVW+DLK+EEVLFDQHTFGDII
Sbjct: 121 CMKLYDVVRKEIWYRPDMYFYRDMLMMLARNKKVDEAKQVWEDLKKEEVLFDQHTFGDII 180

Query: 181 RAYLDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMI 240
           RA+LDN +PSEAMDIY EMR SPD P+SLPFRVILKGL+PYPELRE+IKDDFLELFPDM+
Sbjct: 181 RAFLDNELPSEAMDIYDEMRLSPDPPISLPFRVILKGLLPYPELREKIKDDFLELFPDMV 240

Query: 241 VYDPPEDLFEEDEDRKR 254
           VYDPPEDLFE ++ RK+
Sbjct: 241 VYDPPEDLFEHEDWRKK 257

[Close]
BLAST of MC06g1037 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.5e-83
Identity = 146/190 (76.84%), Postives = 170/190 (89.47%), Query Frame = 0 

Query: 65  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNV 124
           M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQ QVFLCMKLY V
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 125 VRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDNG 184
           VR+E+WYRPDMFFYRDMLMML++NKKV+ETK+VW+DLK+EEVLFDQHTFGD++R +LDN 
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 185 MPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYDPPED 244
           +P EAM +Y EMR+SPDRPLSLPFRVILKGL+PYPELRE++KDDFLELFP MIVYDPPED
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 245 LFEEDEDRKR 255
           + E+ ++  R
Sbjct: 181 ICEDSDEEAR 190

[Close]
BLAST of MC06g1037 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 5.0e-52
Identity = 93/202 (46.04%), Postives = 148/202 (73.27%), Query Frame = 0 

Query: 45  RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVA 104
           RF  G    P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++A
Sbjct: 56  RFHDGRPRGP---LWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLA 115

Query: 105 VLVELQRQKQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKRE 164
           V+ EL+RQ++  L +K++ V++K+ WY+PD+F Y+D+++ L+K+K+++E   +W+ +K+E
Sbjct: 116 VIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKE 175

Query: 165 EVLFDQHTFGDIIRAYLDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQ 224
            +  D  T+ ++IR +L +G P++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +
Sbjct: 176 NLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNK 235

Query: 225 IKDDFLELFPDMIVYDPPEDLF 247
           +K DF ELFP+   YDPPE++F
Sbjct: 236 VKKDFEELFPEKHAYDPPEEIF 254

[Close]
BLAST of MC06g1037 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-15
Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 0 

Query: 86  LDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMML 145
           LDR I S   RLLK D+VAVL EL RQ +  L +K++  +RKE WY+P +  Y DM+ ++
Sbjct: 541 LDRVIISKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVM 600

Query: 146 SKNKKVEETKQVWQDLKREEVLFDQ-HTFGDIIRAYLDNGMPSEAMDIYREMRQSPDRPL 205
           + N  +EE   ++  +K E+ L  +   F  ++   L++ +    MD Y  M+     P 
Sbjct: 601 ADNSLMEEVNYLYSAMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPD 660

Query: 206 SLPFRVILKGLIPYPE--LREQIKDDFLELFPDMIVYDPPEDLFEEDED 252
              FRV++ GL    E  L   ++ D  E + + +      +  EEDE+
Sbjct: 661 RASFRVLVLGLESNGEMGLSAIVRQDAHEYYGESL------EFIEEDEE 703

[Close]
BLAST of MC06g1037 vs. TAIR 10
Match: AT3G42570.1 (peroxidase family protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-07
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 62 KKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVS 96
          KKE  KEGLI  KELKRLQ+NL+RLDRFI SH S
Sbjct: 4  KKEKSKEGLIAAKELKRLQTNLVRLDRFIDSHPS 37

[Close]
BLAST of MC06g1037 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 46.6 bits (109), Expect = 3.5e-05
Identity = 31/120 (25.83%), Postives = 63/120 (52.50%), Query Frame = 0 

Query: 82  NLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMKLYNVVRK--EVWYRPDMFFYR 141
           NL    R++   + R+  + L+++  ++ R ++        +++R+   V  + D+  Y 
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL------DILREMASVGIKKDVVTYN 489

Query: 142 DMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAYLDNGMPSEAMDIYREMRQS 200
            +L    K  K +E K+V+ ++KRE VL +  T+  +I  Y   G+  EAM+I+RE + +
Sbjct: 490 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543

The following BLAST results are available for this feature:
BLAST of MC06g1037 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1PFH73.5e-8276.84Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX... [more]
Q9STF97.0e-5146.04Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q9ZVX54.9e-0425.00Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX... [more]
Q9SIC94.9e-0425.83Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
Q9LVW64.9e-0427.21Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T... [more]
BLAST of MC06g1037 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153223.11.00e-179100.00pentatricopeptide repeat-containing protein At1g62350 [Momordica charantia][more]
XP_023531705.12.70e-14786.06pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pep... [more]
XP_022966084.11.56e-14685.71pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima] >XP_022... [more]
XP_004139064.11.62e-14684.82pentatricopeptide repeat-containing protein At1g62350 isoform X1 [Cucumis sativu... [more]
KAG7022139.12.61e-14686.06Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of MC06g1037 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DGX44.86e-180100.00pentatricopeptide repeat-containing protein At1g62350 OS=Momordica charantia OX=... [more]
A0A6J1HQL77.55e-14785.71pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita maxima OX=366... [more]
A0A1S3BQ111.58e-14684.44pentatricopeptide repeat-containing protein At1g62350 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1EQI14.36e-14686.00pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita moschata OX=3... [more]
A0A2I4F1J69.12e-12471.60pentatricopeptide repeat-containing protein At1g62350 OS=Juglans regia OX=51240 ... [more]
BLAST of MC06g1037 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G62350.12.5e-8376.84Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G46870.15.0e-5246.04Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G09320.18.3e-1532.54Vacuolar sorting protein 9 (VPS9) domain [more]
AT3G42570.13.7e-0776.47peroxidase family protein [more]
AT2G31400.13.5e-0525.83genomes uncoupled 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 64..249
e-value: 3.5E-39
score: 136.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 172..198
e-value: 1.3E-4
score: 19.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 172..198
e-value: 1.1E-4
score: 22.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 169..203
score: 10.621557
NoneNo IPR availablePANTHERPTHR46870:SF1BNAC09G13590D PROTEINcoord: 4..254
IPR044795Pentatricopeptide repeat-containing protein THA8L-likePANTHERPTHR46870PROTEIN THYLAKOID ASSEMBLY 8-LIKE, CHLOROPLASTICcoord: 4..254

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1037.1MC06g1037.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding