MC06g0534 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGGCAAGAAGTCCATCCAACTTCGAAGATTTCTATTGCTACTCCTTCCAATTCAACCTCACCGGTAAGCTTCCACAAATGACTAACATTAGTATCAATTTTTTTTTTTTTTTTTTGCGACTGTTGTTGAAGTTTTGACAGGTAGAAGAGAGAAATGTAGAAATAGACATATATTTTTTAAAAGATAAGGATTTGTAAAATTCTTAATGGACAGAGTTGATGTGTTTTTTATTGTAGAGGAGAAGCAGAAAATCTTGGATGTAGCTACTGTATGCCAGCTTTTGGATCTTGTCATGGGACCTCGATTCCGTCCTCAAGTCCAATTACTAATCAACTTTCTCAAGGTACCAATGAATAATAGGACAATATTTGAGTGATAATACTAGGATAATCTCATATCTAATCAATTTCATTTTTCATATTACTCCAAACCTAACTAACTTCCCTTGAATTAAATGCAAGACCCAAATAGAGTATAAAGGGCTCAATATGGATCACTGGACTAGCATCTTCCGTTTCTTCAACCAGGTACTCATACAACACTATAGATACCATAGACATATGTTCACCTCCGAACTTTCAAGATTATGTTTAATAAATCTGAAGCTTAAAAACATCCTATTAAATCTCTAAACTTCAAGACTTTTTATCTAATAGGGTTCCTATCGCATTCAATTTTCTTCTCTTTTCTTATAAAATTTATGGAGTATTAGACACAGTGAACTATAACATTCCAAATTTATATTTAATAGGACCACGAACTTAAAATTTTAAATATGAGAAGAATCTATGAGCCACAAAATTAAAAGTTCAGAGACTTATCATATACTTTTAAAACTTCATGAATTTATTAGACACAAAATTGAACGTTCATTGACTAATAACACCTTTTAAAGTTCAAAAATCTATTTGGTAAAAGTAGAAGAAGTTTATGTACTAAACTTATAATTTAGTCTTAATTTTATCACTAATAAAACAACAATTTTGTAATGAATGTAACAATAAATTTGAGAATTATTTTTTTCACATTCAATTGAAAGTTTTTTGTATATATCAAGAGTAAAATTGATAATTTTAAAAGTTCAAAGATCGATTTTGAGAAGAGTATAGAGCATATGATGTATTCAACTAAAATTTTAAAATACGATAAATTAAATATTATCTAAAAGATTAGGACCTATTTAGAGTTGAATTGCAATTTTATTATTTTACTATTATTTATTTTAACCGATTGCGTGTTGCCGGCGGCAGGTCAGTTTTCCGGATCTAGAGAACTACGATCCACACCAAGGTTGGCCGGCGATTCTTGATAACTTTGTTGAATGGCTCAAAGCA AAGGCAAGAAGTCCATCCAACTTCGAAGATTTCTATTGCTACTCCTTCCAATTCAACCTCACCGAGGAGAAGCAGAAAATCTTGGATGTAGCTACTGTATGCCAGCTTTTGGATCTTGTCATGGGACCTCGATTCCGTCCTCAAGTCCAATTACTAATCAACTTTCTCAAGACCCAAATAGAGTATAAAGGGCTCAATATGGATCACTGGACTAGCATCTTCCGTTTCTTCAACCAGGTCAGTTTTCCGGATCTAGAGAACTACGATCCACACCAAGGTTGGCCGGCGATTCTTGATAACTTTGTTGAATGGCTCAAAGCA AAGGCAAGAAGTCCATCCAACTTCGAAGATTTCTATTGCTACTCCTTCCAATTCAACCTCACCGAGGAGAAGCAGAAAATCTTGGATGTAGCTACTGTATGCCAGCTTTTGGATCTTGTCATGGGACCTCGATTCCGTCCTCAAGTCCAATTACTAATCAACTTTCTCAAGACCCAAATAGAGTATAAAGGGCTCAATATGGATCACTGGACTAGCATCTTCCGTTTCTTCAACCAGGTCAGTTTTCCGGATCTAGAGAACTACGATCCACACCAAGGTTGGCCGGCGATTCTTGATAACTTTGTTGAATGGCTCAAAGCA KARSPSNFEDFYCYSFQFNLTEEKQKILDVATVCQLLDLVMGPRFRPQVQLLINFLKTQIEYKGLNMDHWTSIFRFFNQVSFPDLENYDPHQGWPAILDNFVEWLKA Homology
BLAST of MC06g0534 vs. ExPASy Swiss-Prot
Match: Q8CCA0 (DCN1-like protein 4 OS=Mus musculus OX=10090 GN=Dcun1d4 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-11 Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy Swiss-Prot
Match: Q92564 (DCN1-like protein 4 OS=Homo sapiens OX=9606 GN=DCUN1D4 PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 3.0e-11 Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy Swiss-Prot
Match: Q9BTE7 (DCN1-like protein 5 OS=Homo sapiens OX=9606 GN=DCUN1D5 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.6e-11 Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy Swiss-Prot
Match: Q9CXV9 (DCN1-like protein 5 OS=Mus musculus OX=10090 GN=Dcun1d5 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.6e-11 Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy Swiss-Prot
Match: Q5PPL2 (DCN1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Dcun1d5 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.6e-11 Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of MC06g0534 vs. NCBI nr
Match: GAY35620.1 (hypothetical protein CUMW_283240 [Citrus unshiu] >GAY35622.1 hypothetical protein CUMW_283240 [Citrus unshiu]) HSP 1 Score: 152 bits (383), Expect = 6.69e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. NCBI nr
Match: XP_006453676.1 (DCN1-like protein 4 isoform X2 [Citrus clementina] >XP_006473967.1 DCN1-like protein 4 isoform X2 [Citrus sinensis] >ESR66916.1 hypothetical protein CICLE_v10009421mg [Citrus clementina] >ESR66917.1 hypothetical protein CICLE_v10009421mg [Citrus clementina] >KDO59389.1 hypothetical protein CISIN_1g027440mg [Citrus sinensis] >KDO59390.1 hypothetical protein CISIN_1g027440mg [Citrus sinensis]) HSP 1 Score: 152 bits (383), Expect = 8.92e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. NCBI nr
Match: KDO59388.1 (hypothetical protein CISIN_1g027440mg [Citrus sinensis]) HSP 1 Score: 152 bits (383), Expect = 9.18e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. NCBI nr
Match: XP_006473966.1 (DCN1-like protein 4 isoform X1 [Citrus sinensis] >XP_024033439.1 DCN1-like protein 4 isoform X1 [Citrus clementina] >KDO59387.1 hypothetical protein CISIN_1g027440mg [Citrus sinensis]) HSP 1 Score: 152 bits (383), Expect = 9.18e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. NCBI nr
Match: KAA8540533.1 (hypothetical protein F0562_024548 [Nyssa sinensis]) HSP 1 Score: 151 bits (381), Expect = 2.25e-43 Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy TrEMBL
Match: A0A2H5N5X9 (Defective in cullin neddylation protein OS=Citrus unshiu OX=55188 GN=CUMW_283240 PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 3.24e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy TrEMBL
Match: V4UW29 (Defective in cullin neddylation protein OS=Citrus clementina OX=85681 GN=CICLE_v10009421mg PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 4.32e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy TrEMBL
Match: A0A067EZU1 (Defective in cullin neddylation protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027440mg PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 4.32e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy TrEMBL
Match: A0A067EWB4 (Defective in cullin neddylation protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027440mg PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 4.44e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. ExPASy TrEMBL
Match: A0A067F7B5 (Defective in cullin neddylation protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027440mg PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 4.44e-44 Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC06g0534 vs. TAIR 10
Match: AT1G15860.1 (Domain of unknown function (DUF298) ) HSP 1 Score: 141.0 bits (354), Expect = 5.7e-34 Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of MC06g0534 vs. TAIR 10
Match: AT1G15860.2 (Domain of unknown function (DUF298) ) HSP 1 Score: 141.0 bits (354), Expect = 5.7e-34 Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of MC06g0534 vs. TAIR 10
Match: AT1G15860.3 (Domain of unknown function (DUF298) ) HSP 1 Score: 133.7 bits (335), Expect = 9.1e-32 Identity = 58/115 (50.43%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of MC06g0534 vs. TAIR 10
Match: AT3G12760.1 (CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07 Identity = 32/93 (34.41%), Postives = 46/93 (49.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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