MC04g0185 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0185
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	B box-type domain-containing protein
Location	MC04: 1445429 .. 1445800 (+)
RNA-Seq Expression	MC04g0185
Synteny	MC04g0185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGAGGGGTAGAACGGGAAACCCTCCGGCCGCCACCGACCTCCGACGGGATATCGGCGGCGGGGGGGCGTAATCCGGTGCCGTGCGAGCTGTGCGGGTCGAGGGCGTCGCTGTACTGCGCAGCGGACGACGCGTATTTGTGCGGAAAGTGCGACAAATGGGTCCATGGGGCGAATTTCTTGGCGCAGCGGCACGTCCGGTGCCTGCTGTGCAGCACGTGCCAGAGCCACACGCAGAGGTATCTGTTGGGAGCGTCGGTGGAGATTGTGCTCCCAAATATTTCGAGAAATTTCCAAAATCACTGTGATCGAGACGATGACGATGATCAAAATTGCTCGCAACTATTGAAAACGCCGTGTCTGTTTCTT

mRNA sequence

ATGTGCAGAGGGGTAGAACGGGAAACCCTCCGGCCGCCACCGACCTCCGACGGGATATCGGCGGCGGGGGGGCGTAATCCGGTGCCGTGCGAGCTGTGCGGGTCGAGGGCGTCGCTGTACTGCGCAGCGGACGACGCGTATTTGTGCGGAAAGTGCGACAAATGGGTCCATGGGGCGAATTTCTTGGCGCAGCGGCACGTCCGGTGCCTGCTGTGCAGCACGTGCCAGAGCCACACGCAGAGGTATCTGTTGGGAGCGTCGGTGGAGATTGTGCTCCCAAATATTTCGAGAAATTTCCAAAATCACTGTGATCGAGACGATGACGATGATCAAAATTGCTCGCAACTATTGAAAACGCCGTGTCTGTTTCTT

Coding sequence (CDS)

ATGTGCAGAGGGGTAGAACGGGAAACCCTCCGGCCGCCACCGACCTCCGACGGGATATCGGCGGCGGGGGGGCGTAATCCGGTGCCGTGCGAGCTGTGCGGGTCGAGGGCGTCGCTGTACTGCGCAGCGGACGACGCGTATTTGTGCGGAAAGTGCGACAAATGGGTCCATGGGGCGAATTTCTTGGCGCAGCGGCACGTCCGGTGCCTGCTGTGCAGCACGTGCCAGAGCCACACGCAGAGGTATCTGTTGGGAGCGTCGGTGGAGATTGTGCTCCCAAATATTTCGAGAAATTTCCAAAATCACTGTGATCGAGACGATGACGATGATCAAAATTGCTCGCAACTATTGAAAACGCCGTGTCTGTTTCTT

Protein sequence

MCRGVERETLRPPPTSDGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNISRNFQNHCDRDDDDDQNCSQLLKTPCLFL

Homology

[Close]

BLAST of MC04g0185 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.6e-22
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 1  MCRGVERETLRPPPTS--DGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKWVHG 60
          MCRG E+E  R         +     + PV CELCG  A++YC AD A+LC KCD+WVH 
Sbjct: 1  MCRGFEKEEERRSDNGGCQRLCTESHKAPVSCELCGENATVYCEADAAFLCRKCDRWVHS 60

Query: 61 ANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI 96
          ANFLA+RH+R ++C+TC+  T+R L+G +  +VLP I
Sbjct: 61 ANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI 97

[Close]

BLAST of MC04g0185 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.9e-20
Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 1   MCRGVERETLRPPPTSDGISAAGGRN-------PVPCELCGSRASLYCAADDAYLCGKCD 60
           MCRG+  E  R    SDG    G R+       PV CELC   AS++C AD A+LC KCD
Sbjct: 1   MCRGLNNEESR---RSDG---GGCRSLCTRPSVPVRCELCDGDASVFCEADSAFLCRKCD 60

Query: 61  KWVHGANFLAQRHVRCLLCSTCQSHTQRYLLG-ASVEIVLPNISRNFQNHCDRDDDDDQN 120
           +WVHGANFLA RHVR +LC++CQ  T+R L+G     +VLP+++   +   +   + D +
Sbjct: 61  RWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENRSEQDNH 120

Query: 121 CSQLLKTPCLFL 125
                + P +FL
Sbjct: 121 -----EVPFVFL 121

[Close]

BLAST of MC04g0185 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 30 CELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHTQRYLLG 86
          CELCG+ A L+CAAD A+LC  CD   H +NFL  RH R ++C  C+S TQ ++ G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]

BLAST of MC04g0185 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-08
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 16 SDGISAAGGRNPVPCELCGSRA-SLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCST 75
          S+ I +       PC+ C S A ++YC AD AYLC  CD  VH AN +A RH R  +C +
Sbjct: 6  SNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCES 65

Query: 76 CQSHTQRYLLGA 87
          C+     +L  A
Sbjct: 66 CERAPAAFLCEA 77

[Close]

BLAST of MC04g0185 vs. ExPASy Swiss-Prot
Match: Q9C7E8 (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 28 VPCELCGSR-ASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTC 76
          VPC+ CG R A L+C AD A LC  CD+ VH AN L+++HVR  +C  C
Sbjct: 7  VPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC 55

[Close]

BLAST of MC04g0185 vs. NCBI nr
Match: XP_008455408.1 (PREDICTED: B-box zinc finger protein 21 [Cucumis melo] >KAA0040260.1 B-box zinc finger protein 21 [Cucumis melo var. makuwa] >TYK07088.1 B-box zinc finger protein 21 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (440), Expect = 2.32e-53
Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MCRGVERETLRPPP----TSDGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKWV 60
           MC+GVE+E  + P     T+D  +A GG +PV CELCGSRASLYC AD+AYLCGKCDK V
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAARGG-DPVRCELCGSRASLYCEADEAYLCGKCDKSV 60

Query: 61  HGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI---SRNFQN-HCDRDDDDDQN 120
           H ANFLA RHVRCLLC+TCQSHTQRYLLGAS+E+V+P+I    RNF N HCD D    QN
Sbjct: 61  HNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVSRERNFLNYHCDSDGFV-QN 120

Query: 121 CSQLLKTPCLFL 124
           CSQ+LKTPCLFL
Sbjct: 121 CSQVLKTPCLFL 130

[Close]

BLAST of MC04g0185 vs. NCBI nr
Match: KGN43541.1 (hypothetical protein Csa_020490 [Cucumis sativus])

HSP 1 Score: 172 bits (436), Expect = 1.00e-52
Identity = 92/134 (68.66%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MCRGVERE-----TLRPPPTSDGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKW 60
           MC+GVE+E      +R   T+D   AAGG +PV CELCGSRASLYC AD+AYLCGKCDK 
Sbjct: 1   MCKGVEQEETTQVAVRQRRTTDD-GAAGGGDPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLP----NISRNFQN-HCDRDDDDD 120
           VH ANFLA RHVRCLLC+TCQSHTQRYLLGAS+E+VLP    +  RNF N HCD D    
Sbjct: 61  VHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPPSLVSRERNFLNYHCDSDSFV- 120

Query: 121 QNCSQLLKTPCLFL 124
           QNCSQ+LKTPCLFL
Sbjct: 121 QNCSQVLKTPCLFL 132

[Close]

BLAST of MC04g0185 vs. NCBI nr
Match: XP_023511647.1 (B-box domain protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162 bits (409), Expect = 1.42e-48
Identity = 85/135 (62.96%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 1   MCRGVERE----TLRPPPTSDGISA-AGGRNPVPCELCGSRASLYCAADDAYLCGKCDKW 60
           MC+GV +E    T++   T++   A  GG +P PCELCGSRASLYC AD+AYLC KCDK 
Sbjct: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60

Query: 61  VHGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI------SRNFQNHCDRDDDD 120
           VH ANFLA RHVRCLLC+TCQ  T+RY+LGAS+E+VLP+I       RNFQN+    DD 
Sbjct: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120

Query: 121 DQNCSQLLKTPCLFL 124
           DQN SQLLKTPCLFL
Sbjct: 121 DQNSSQLLKTPCLFL 135

[Close]

BLAST of MC04g0185 vs. NCBI nr
Match: KAG6572307.1 (B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011919.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161 bits (408), Expect = 2.02e-48
Identity = 85/135 (62.96%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 1   MCRGVERE----TLRPPPTSDGISA-AGGRNPVPCELCGSRASLYCAADDAYLCGKCDKW 60
           MC+GV +E    T++   T++   A  GG +P PCELCGSRASLYC AD+AYLC KCDK 
Sbjct: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60

Query: 61  VHGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI------SRNFQNHCDRDDDD 120
           VH ANFLA RHVRCLLC+TCQ  T+RYLLGAS+E+VLP+I       RNFQN+    DD 
Sbjct: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDY 120

Query: 121 DQNCSQLLKTPCLFL 124
           DQN SQLL+TPCLFL
Sbjct: 121 DQNSSQLLQTPCLFL 135

[Close]

BLAST of MC04g0185 vs. NCBI nr
Match: XP_022953004.1 (B-box domain protein 30 [Cucurbita moschata])

HSP 1 Score: 157 bits (397), Expect = 4.95e-47
Identity = 77/108 (71.30%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 23  GGRNPVPCELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHTQRY 82
           GG +P PCELCGSRASLYC AD+AYLC KCDK VH ANFLA RHVRCLLC+TCQ  T+RY
Sbjct: 7   GGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRY 66

Query: 83  LLGASVEIVLPNI------SRNFQNHCDRDDDDDQNCSQLLKTPCLFL 124
           LLGAS+E+VLP+I       RNFQN+    DD DQN SQLL+TPCLFL
Sbjct: 67  LLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 114

[Close]

BLAST of MC04g0185 vs. ExPASy TrEMBL
Match: A0A5A7TAC0 (B-box zinc finger protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004060 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 1.12e-53
Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MCRGVERETLRPPP----TSDGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKWV 60
           MC+GVE+E  + P     T+D  +A GG +PV CELCGSRASLYC AD+AYLCGKCDK V
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAARGG-DPVRCELCGSRASLYCEADEAYLCGKCDKSV 60

Query: 61  HGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI---SRNFQN-HCDRDDDDDQN 120
           H ANFLA RHVRCLLC+TCQSHTQRYLLGAS+E+V+P+I    RNF N HCD D    QN
Sbjct: 61  HNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVSRERNFLNYHCDSDGFV-QN 120

Query: 121 CSQLLKTPCLFL 124
           CSQ+LKTPCLFL
Sbjct: 121 CSQVLKTPCLFL 130

[Close]

BLAST of MC04g0185 vs. ExPASy TrEMBL
Match: A0A1S3C0U6 (B-box zinc finger protein 21 OS=Cucumis melo OX=3656 GN=LOC103495577 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 1.12e-53
Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MCRGVERETLRPPP----TSDGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKWV 60
           MC+GVE+E  + P     T+D  +A GG +PV CELCGSRASLYC AD+AYLCGKCDK V
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAARGG-DPVRCELCGSRASLYCEADEAYLCGKCDKSV 60

Query: 61  HGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI---SRNFQN-HCDRDDDDDQN 120
           H ANFLA RHVRCLLC+TCQSHTQRYLLGAS+E+V+P+I    RNF N HCD D    QN
Sbjct: 61  HNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVSRERNFLNYHCDSDGFV-QN 120

Query: 121 CSQLLKTPCLFL 124
           CSQ+LKTPCLFL
Sbjct: 121 CSQVLKTPCLFL 130

[Close]

BLAST of MC04g0185 vs. ExPASy TrEMBL
Match: A0A0A0K6V9 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044810 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 4.86e-53
Identity = 92/134 (68.66%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MCRGVERE-----TLRPPPTSDGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKW 60
           MC+GVE+E      +R   T+D   AAGG +PV CELCGSRASLYC AD+AYLCGKCDK 
Sbjct: 1   MCKGVEQEETTQVAVRQRRTTDD-GAAGGGDPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHGANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLP----NISRNFQN-HCDRDDDDD 120
           VH ANFLA RHVRCLLC+TCQSHTQRYLLGAS+E+VLP    +  RNF N HCD D    
Sbjct: 61  VHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPPSLVSRERNFLNYHCDSDSFV- 120

Query: 121 QNCSQLLKTPCLFL 124
           QNCSQ+LKTPCLFL
Sbjct: 121 QNCSQVLKTPCLFL 132

[Close]

BLAST of MC04g0185 vs. ExPASy TrEMBL
Match: A0A6J1GNE7 (B-box domain protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111455519 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 2.40e-47
Identity = 77/108 (71.30%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 23  GGRNPVPCELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHTQRY 82
           GG +P PCELCGSRASLYC AD+AYLC KCDK VH ANFLA RHVRCLLC+TCQ  T+RY
Sbjct: 7   GGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRY 66

Query: 83  LLGASVEIVLPNI------SRNFQNHCDRDDDDDQNCSQLLKTPCLFL 124
           LLGAS+E+VLP+I       RNFQN+    DD DQN SQLL+TPCLFL
Sbjct: 67  LLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 114

[Close]

BLAST of MC04g0185 vs. ExPASy TrEMBL
Match: A0A6J1HUR8 (B-box domain protein 30 OS=Cucurbita maxima OX=3661 GN=LOC111468064 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.71e-44
Identity = 76/108 (70.37%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 23  GGRNPVPCELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHTQRY 82
           GG +P PCELCGSRASLYC AD+AYLC KCDK VH ANFLA RHVRCLLC+TCQ  T+RY
Sbjct: 7   GGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRQTRRY 66

Query: 83  LLGASVEIVLPNI------SRNFQNHCDRDDDDDQNCSQLLKTPCLFL 124
           LLGAS+E+VLP+I       RNFQN  D  D   QN SQLLKT CLFL
Sbjct: 67  LLGASMEVVLPSIVSSSSMDRNFQNDSDGYD---QNSSQLLKTLCLFL 111

[Close]

BLAST of MC04g0185 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.8e-23
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 1  MCRGVERETLRPPPTS--DGISAAGGRNPVPCELCGSRASLYCAADDAYLCGKCDKWVHG 60
          MCRG E+E  R         +     + PV CELCG  A++YC AD A+LC KCD+WVH 
Sbjct: 1  MCRGFEKEEERRSDNGGCQRLCTESHKAPVSCELCGENATVYCEADAAFLCRKCDRWVHS 60

Query: 61 ANFLAQRHVRCLLCSTCQSHTQRYLLGASVEIVLPNI 96
          ANFLA+RH+R ++C+TC+  T+R L+G +  +VLP I
Sbjct: 61 ANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI 97

[Close]

BLAST of MC04g0185 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-21
Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 1   MCRGVERETLRPPPTSDGISAAGGRN-------PVPCELCGSRASLYCAADDAYLCGKCD 60
           MCRG+  E  R    SDG    G R+       PV CELC   AS++C AD A+LC KCD
Sbjct: 1   MCRGLNNEESR---RSDG---GGCRSLCTRPSVPVRCELCDGDASVFCEADSAFLCRKCD 60

Query: 61  KWVHGANFLAQRHVRCLLCSTCQSHTQRYLLG-ASVEIVLPNISRNFQNHCDRDDDDDQN 120
           +WVHGANFLA RHVR +LC++CQ  T+R L+G     +VLP+++   +   +   + D +
Sbjct: 61  RWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENRSEQDNH 120

Query: 121 CSQLLKTPCLFL 125
                + P +FL
Sbjct: 121 -----EVPFVFL 121

[Close]

BLAST of MC04g0185 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 42/90 (46.67%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 30  CELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHT----QRYLLG 89
           CELC   A +YC +D A LC  CD  VHGANFL  +H+RCLLCS CQSHT        LG
Sbjct: 6   CELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNLG 65

Query: 90  ASVEIVLPNISRNFQNHCDRDDDDDQNCSQ 116
            +V I    ++R   N+       DQN +Q
Sbjct: 66  PTVSICESCLARKKNNNSSL-AGRDQNLNQ 94

[Close]

BLAST of MC04g0185 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 70.9 bits (172), Expect = 8.4e-13
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 30 CELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHT 80
          C+LC   A +YC +D A LC  CD  VHGANFL  +H RCLLCS CQS T
Sbjct: 5  CDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLT 54

[Close]

BLAST of MC04g0185 vs. TAIR 10
Match: AT3G21150.1 (B-box 32 )

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 30 CELCGSRASLYCAADDAYLCGKCDKWVHGANFLAQRHVRCLLCSTCQSHTQRYLLG 86
          CELCG+ A L+CAAD A+LC  CD   H +NFL  RH R ++C  C+S TQ ++ G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

The following BLAST results are available for this feature:

BLAST of MC04g0185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3I2	9.6e-22	48.45	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LRM4	6.9e-20	42.42	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
Q9LJB7	1.5e-11	51.79	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
Q39057	2.7e-08	40.28	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]
Q9C7E8	3.5e-08	53.06	Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE...	[more]

BLAST of MC04g0185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455408.1	2.32e-53	68.94	PREDICTED: B-box zinc finger protein 21 [Cucumis melo] >KAA0040260.1 B-box zinc ...	[more]
KGN43541.1	1.00e-52	68.66	hypothetical protein Csa_020490 [Cucumis sativus]	[more]
XP_023511647.1	1.42e-48	62.96	B-box domain protein 30-like [Cucurbita pepo subsp. pepo]	[more]
KAG6572307.1	2.02e-48	62.96	B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_022953004.1	4.95e-47	71.30	B-box domain protein 30 [Cucurbita moschata]	[more]

BLAST of MC04g0185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAC0	1.12e-53	68.94	B-box zinc finger protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C0U6	1.12e-53	68.94	B-box zinc finger protein 21 OS=Cucumis melo OX=3656 GN=LOC103495577 PE=4 SV=1	[more]
A0A0A0K6V9	4.86e-53	68.66	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044810 ...	[more]
A0A6J1GNE7	2.40e-47	71.30	B-box domain protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111455519 PE=4 SV=1	[more]
A0A6J1HUR8	1.71e-44	70.37	B-box domain protein 30 OS=Cucurbita maxima OX=3661 GN=LOC111468064 PE=4 SV=1	[more]

BLAST of MC04g0185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15248.1	6.8e-23	48.45	B-box type zinc finger family protein	[more]
AT3G21890.1	4.9e-21	42.42	B-box type zinc finger family protein	[more]
AT5G54470.1	1.5e-14	46.67	B-box type zinc finger family protein	[more]
AT4G27310.1	8.4e-13	60.00	B-box type zinc finger family protein	[more]
AT3G21150.1	1.1e-12	51.79	B-box 32	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 25..71 e-value: 5.0E-10 score: 49.3
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 27..66 e-value: 8.8E-6 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 21..109
None	No IPR available	PANTHER	PTHR31717:SF100	B-BOX ZINC FINGER PROTEIN 29	coord: 21..109
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 29..71 e-value: 3.66981E-13 score: 57.3075

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0185.1	MC04g0185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding