MC03g0295 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0295
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 8836507 .. 8836685 (+)
RNA-Seq ExpressionMC03g0295
SyntenyMC03g0295
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGCCCAAGGAGCTACAACTTTCCTTCTTACTTTTCTCAAGCAAGAAGCTAATGTGTGGTTGTACTTCTTAAAAAGCAGGCTCCTCCTGAGCACATGCACGACACAACAATAACCAAGGAGAGGATCCTACTACTCTTTTGCATAATAAAAGGGCTAAGTGTGGATGTAGGGAAGCTT

mRNA sequence

TCTGCCCAAGGAGCTACAACTTTCCTTCTTACTTTTCTCAAGCAAGAAGCTAATGTGTGGTTGTACTTCTTAAAAAGCAGGCTCCTCCTGAGCCACGACACAACAATAACCAAGGAGAGGATCCTACTACTCTTTTGCATAATAAAAGGGCTAAGTGTGGATGTAGGGAAGCTT

Coding sequence (CDS)

TCTGCCCAAGGAGCTACAACTTTCCTTCTTACTTTTCTCAAGCAAGAAGCTAATGTGTGGTTGTACTTCTTAAAAAGCAGGCTCCTCCTGAGCCACGACACAACAATAACCAAGGAGAGGATCCTACTACTCTTTTGCATAATAAAAGGGCTAAGTGTGGATGTAGGGAAGCTT

Protein sequence

SAQGATTFLLTFLKQEANVWLYFLKSRLLLSHDTTITKERILLLFCIIKGLSVDVGKL
Homology
[Close]
BLAST of MC03g0295 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])

HSP 1 Score: 53.5 bits (127), Expect = 1.92e-06
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           S+QGA T L + L   A VW +FLKSRLL  +H  T++KER+LLL+ ++ G S++VG++
Sbjct: 65  SSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQI 123

[Close]
BLAST of MC03g0295 vs. NCBI nr
Match: PON71279.1 (hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii])

HSP 1 Score: 50.8 bits (120), Expect = 5.15e-06
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 1  SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
          S+Q A   L + L   ANVW +FLKSRLL  +H  T++KER+LLL+ ++ G S++VG++
Sbjct: 22 SSQDAYICLRSSLNPPANVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQM 80

[Close]
BLAST of MC03g0295 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 49.7 bits (117), Expect = 5.55e-05
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           S+QGA T L + L   A VW +FLKSRLL  +H  T++KE + LL+ ++ G S++VG++
Sbjct: 179 SSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRM 237

[Close]
BLAST of MC03g0295 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 49.7 bits (117), Expect = 5.92e-05
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           SAQGA T + + L   A VW +FLKSRLL  +H  T++K+R+LLL  ++ G S++VG++
Sbjct: 158 SAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 216

[Close]
BLAST of MC03g0295 vs. NCBI nr
Match: PON44141.1 (hypothetical protein PanWU01x14_268850 [Parasponia andersonii])

HSP 1 Score: 48.5 bits (114), Expect = 1.16e-04
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           S QGA  +L + L   A VW +FLKS LL  +H   ++KER+LLL+ ++ G S++VG++
Sbjct: 106 SFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSMLTGKSINVGRM 164

[Close]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 9.28e-07
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           S+QGA T L + L   A VW +FLKSRLL  +H  T++KER+LLL+ ++ G S++VG++
Sbjct: 65  SSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQI 123

[Close]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match: A0A2P5DDA9 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_074190 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.49e-06
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 1  SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
          S+Q A   L + L   ANVW +FLKSRLL  +H  T++KER+LLL+ ++ G S++VG++
Sbjct: 22 SSQDAYICLRSSLNPPANVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQM 80

[Close]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.69e-05
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           S+QGA T L + L   A VW +FLKSRLL  +H  T++KE + LL+ ++ G S++VG++
Sbjct: 179 SSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRM 237

[Close]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.87e-05
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           SAQGA T + + L   A VW +FLKSRLL  +H  T++K+R+LLL  ++ G S++VG++
Sbjct: 158 SAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 216

[Close]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match: A0A2P5B5S0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.61e-05
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 1   SAQGATTFLLTFLKQEANVWLYFLKSRLL-LSHDTTITKERILLLFCIIKGLSVDVGKL 58
           S QGA  +L + L   A VW +FLKS LL  +H   ++KER+LLL+ ++ G S++VG++
Sbjct: 106 SFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSMLTGKSINVGRM 164

The following BLAST results are available for this feature:
BLAST of MC03g0295 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g0295 vs. NCBI nr
Match NameE-valueIdentityDescription
PON62892.11.92e-0649.15hypothetical protein PanWU01x14_135680 [Parasponia andersonii][more]
PON71279.15.15e-0647.46hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii][more]
PON70375.15.55e-0545.76hypothetical protein PanWU01x14_080440 [Parasponia andersonii][more]
PON46472.15.92e-0547.46hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON44141.11.16e-0444.07hypothetical protein PanWU01x14_268850 [Parasponia andersonii][more]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5CPE89.28e-0749.15Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... [more]
A0A2P5DDA92.49e-0647.46Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DAQ22.69e-0545.76Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... [more]
A0A2P5BCG42.87e-0547.46Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5B5S05.61e-0544.07Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE... [more]
BLAST of MC03g0295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0295.1MC03g0295.1mRNA