MC02g0946 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0946
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Encodes a protein of unknown function that is a marker for oxidative stress response.
Location	MC02: 7556976 .. 7557349 (+)
RNA-Seq Expression	MC02g0946
Synteny	MC02g0946

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCCATGGCTTCTTGTCGAAAGAAGAAGAATGATGACGCTACTTTCCTGGAGGATTTGAAGGATCACATCGACGAGTTCATTAATGCATCCATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGGTTTACTTCCATTGCCCTTTTTGAGCGTCTAAAAGAAGTGATCACTTTCTGATATAGATAGTTATAGGGACGAAGTGAAGAGAGGCGGCAATTACCCCCTCTTAGTTTGTTTACAAGTTGATATATTGGGGTTGGTTTGGTTGCAGATGTTCCGAATGTCGAAAGTTGTAGCAGATAGGAACTCAGAGACCACAAATGGAGTTGAAAGTTCTCTTCCTCTTCGAACAACAGTATCAGAA

mRNA sequence

CCACCCATGGCTTCTTGTCGAAAGAAGAAGAATGATGACGCTACTTTCCTGGAGGATTTGAAGGATCACATCGACGAGTTCATTAATGCATCCATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGATGTTCCGAATGTCGAAAGTTGTAGCAGATAGGAACTCAGAGACCACAAATGGAGTTGAAAGTTCTCTTCCTCTTCGAACAACAGTATCAGAA

Coding sequence (CDS)

CCACCCATGGCTTCTTGTCGAAAGAAGAAGAATGATGACGCTACTTTCCTGGAGGATTTGAAGGATCACATCGACGAGTTCATTAATGCATCCATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGATGTTCCGAATGTCGAAAGTTGTAGCAGATAGGAACTCAGAGACCACAAATGGAGTTGAAAGTTCTCTTCCTCTTCGAACAACAGTATCAGAA

Protein sequence

PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

Homology

[Close]

BLAST of MC02g0946 vs. NCBI nr
Match: XP_022146205.1 (uncharacterized protein LOC111015478 [Momordica charantia])

HSP 1 Score: 153 bits (386), Expect = 1.86e-46
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 20 PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 79

Query: 61 TNGVESSLPLRTTVSE 76
          TNGVESSLPLRTTVSE
Sbjct: 80 TNGVESSLPLRTTVSE 95

[Close]

BLAST of MC02g0946 vs. NCBI nr
Match: XP_004148843.1 (uncharacterized protein LOC101211034 [Cucumis sativus] >KGN61795.1 hypothetical protein Csa_006035 [Cucumis sativus])

HSP 1 Score: 140 bits (353), Expect = 1.63e-41
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PP+ SCRKKKN++ATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 14 PPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 73

Query: 61 TNGVESSLPLRTTVSE 76
           NGVESSLPLRTTVSE
Sbjct: 74 -NGVESSLPLRTTVSE 88

[Close]

BLAST of MC02g0946 vs. NCBI nr
Match: XP_008460939.1 (PREDICTED: uncharacterized protein LOC103499674 [Cucumis melo])

HSP 1 Score: 138 bits (348), Expect = 9.45e-41
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PP+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 14 PPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET 73

Query: 61 TNGVESSLPLRTTVSE 76
           NGVESSLPLRTTVSE
Sbjct: 74 -NGVESSLPLRTTVSE 88

[Close]

BLAST of MC02g0946 vs. NCBI nr
Match: KAA0045538.1 (uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (348), Expect = 4.57e-40
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1   PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
           PP+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 66  PPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET 125

Query: 61  TNGVESSLPLRTTVSE 76
            NGVESSLPLRTTVSE
Sbjct: 126 -NGVESSLPLRTTVSE 140

[Close]

BLAST of MC02g0946 vs. NCBI nr
Match: XP_022986651.1 (uncharacterized protein LOC111484328 [Cucurbita maxima] >XP_022986652.1 uncharacterized protein LOC111484328 [Cucurbita maxima])

HSP 1 Score: 136 bits (343), Expect = 5.47e-40
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PP+ SCRKKKN+D TFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 14 PPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET 73

Query: 61 TNGVESSLPLRTTVSE 76
           +GVESSLPLRTTVSE
Sbjct: 74 -SGVESSLPLRTTVSE 88

[Close]

BLAST of MC02g0946 vs. ExPASy TrEMBL
Match: A0A6J1CWM9 (uncharacterized protein LOC111015478 OS=Momordica charantia OX=3673 GN=LOC111015478 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 9.00e-47
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 20 PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 79

Query: 61 TNGVESSLPLRTTVSE 76
          TNGVESSLPLRTTVSE
Sbjct: 80 TNGVESSLPLRTTVSE 95

[Close]

BLAST of MC02g0946 vs. ExPASy TrEMBL
Match: A0A0A0LIQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247070 PE=4 SV=1)

HSP 1 Score: 140 bits (353), Expect = 7.90e-42
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PP+ SCRKKKN++ATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 14 PPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 73

Query: 61 TNGVESSLPLRTTVSE 76
           NGVESSLPLRTTVSE
Sbjct: 74 -NGVESSLPLRTTVSE 88

[Close]

BLAST of MC02g0946 vs. ExPASy TrEMBL
Match: A0A1S3CDL9 (uncharacterized protein LOC103499674 OS=Cucumis melo OX=3656 GN=LOC103499674 PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 4.58e-41
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PP+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 14 PPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET 73

Query: 61 TNGVESSLPLRTTVSE 76
           NGVESSLPLRTTVSE
Sbjct: 74 -NGVESSLPLRTTVSE 88

[Close]

BLAST of MC02g0946 vs. ExPASy TrEMBL
Match: A0A5A7TRS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00290 PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 2.21e-40
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1   PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
           PP+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 66  PPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET 125

Query: 61  TNGVESSLPLRTTVSE 76
            NGVESSLPLRTTVSE
Sbjct: 126 -NGVESSLPLRTTVSE 140

[Close]

BLAST of MC02g0946 vs. ExPASy TrEMBL
Match: A0A6J1J859 (uncharacterized protein LOC111484328 OS=Cucurbita maxima OX=3661 GN=LOC111484328 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 2.65e-40
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          PP+ SCRKKKN+D TFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSET
Sbjct: 14 PPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRNSET 73

Query: 61 TNGVESSLPLRTTVSE 76
           +GVESSLPLRTTVSE
Sbjct: 74 -SGVESSLPLRTTVSE 88

[Close]

BLAST of MC02g0946 vs. TAIR 10
Match: AT4G39235.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 5.8e-25
Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSET 60
          P M SCRKK  DDATF ED+KDHID+FI+ASMDEHKSCF+KTI KMF +SK VA++ +  
Sbjct: 11 PAMTSCRKKVKDDATFFEDVKDHIDDFIHASMDEHKSCFQKTIKKMFGLSKAVAEKQAVE 70

Query: 61 TNGVESSLPLRTTVSE 77
            GVES LPL+TTVSE
Sbjct: 71 AKGVESQLPLQTTVSE 86

[Close]

BLAST of MC02g0946 vs. TAIR 10
Match: AT3G05570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits to 73 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 8.4e-24
Identity = 53/77 (68.83%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  PPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADR-NSE 60
          P  +SCRKK  DDA FLED+KDHID+FINASMD+HK+CF KTI KMF +SK VAD+  SE
Sbjct: 14 PATSSCRKKTKDDANFLEDVKDHIDDFINASMDDHKNCFNKTIKKMFGLSKAVADKQQSE 73

Query: 61 TTNGVESSLPLRTTVSE 77
             GVES LPL+TTVS+
Sbjct: 74 AKGGVESYLPLQTTVSD 90

[Close]

BLAST of MC02g0946 vs. TAIR 10
Match: AT2G21640.1 (Encodes a protein of unknown function that is a marker for oxidative stress response. )

HSP 1 Score: 77.0 bits (188), Expect = 7.2e-15
Identity = 40/79 (50.63%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 2   PMASCRKK-KNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKM---FRMSKVVADRN 61
           P +SCRK+ K+D+ATF  +LKDH+DEFI+ASMDEHK+CFK T++K+   F  ++ VA++ 
Sbjct: 26  PASSCRKRVKDDNATFFANLKDHMDEFIHASMDEHKTCFKNTMDKIFGSFSKAEAVAEKQ 85

Query: 62  SETTNGVESSLPLRTTVSE 77
            E    VE   PL+T V++
Sbjct: 86  IEAKEVVEIHSPLQTAVTK 104

The following BLAST results are available for this feature:

BLAST of MC02g0946 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g0946 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146205.1	1.86e-46	100.00	uncharacterized protein LOC111015478 [Momordica charantia]	[more]
XP_004148843.1	1.63e-41	93.42	uncharacterized protein LOC101211034 [Cucumis sativus] >KGN61795.1 hypothetical ...	[more]
XP_008460939.1	9.45e-41	92.11	PREDICTED: uncharacterized protein LOC103499674 [Cucumis melo]	[more]
KAA0045538.1	4.57e-40	92.11	uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa]	[more]
XP_022986651.1	5.47e-40	90.79	uncharacterized protein LOC111484328 [Cucurbita maxima] >XP_022986652.1 uncharac...	[more]

BLAST of MC02g0946 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWM9	9.00e-47	100.00	uncharacterized protein LOC111015478 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0LIQ4	7.90e-42	93.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247070 PE=4 SV=1	[more]
A0A1S3CDL9	4.58e-41	92.11	uncharacterized protein LOC103499674 OS=Cucumis melo OX=3656 GN=LOC103499674 PE=...	[more]
A0A5A7TRS7	2.21e-40	92.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1J859	2.65e-40	90.79	uncharacterized protein LOC111484328 OS=Cucurbita maxima OX=3661 GN=LOC111484328...	[more]

BLAST of MC02g0946 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39235.1	5.8e-25	69.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G05570.1	8.4e-24	68.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G21640.1	7.2e-15	50.63	Encodes a protein of unknown function that is a marker for oxidative stress resp...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..76
None	No IPR available	PANTHER	PTHR33622:SF10	DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF	coord: 1..76
None	No IPR available	PANTHER	PTHR33622	FAMILY NOT NAMED	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0946.1	MC02g0946.1	mRNA