Lsi11G007780 (gene) Bottle gourd (USVL1VR-Ls) v1

InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Position :
0
Zoom :
x 1
GAATGCTGAGAATAAAAGCTTCTCCACATCTCATTTCCCGCTATCTCAATTTCGACAAAACAAATTCAAAACCAAATCCCAATCGTCAAGCTCTTTACGAAAAGCTCATCGCCTTCTTGCAACAATGTGTAAGCATCAAACAATTGAAACAAATCCATACCCAAATGCTCACAAACTCAATTCACAAACCCAGTTCCTTTCTCTACAAGATCGTCGACCTCAAAGATTTCGCCTATGCCTCGGATTTCTTCTCCAACATTCTCGACCCCACCGAGTACTCTTTCAATGTCATGATTCGTGGTCTCTCGACGACTTGGAATAAGTCTTCTCTTGCCCTTGAATTCTATTCTCGAATGAAATTTCTGGGTTTGAAACCCAATAAGCTCACCTACCCATTTCTGTTTATTGCGTGTTCCAATCTTTTGGCTGTTGAAGATGGGCGGGTGGGTCATTGTTCTGTGATTAAACGTGGGTTGGACGAGGATGGTCATGTGAGTCATTCTTTGATTACGATGTATGCGCGGTGTGGGCAAGTGAGTCATGCTCGGAAGGTGTTTGATGAAATTCCTGAGAAGGATTTGGTTTCGTGGAACTCTATGATTTCGGGTTACTCGAAGATGAGGCATGCTGGTGAGGCTGTGGGTTTGTTTAGAGAGATGATGGAAGCTGGGTTTCAGCCCAATGAGATGACTTTAGTTAGTGTCTTGGGGGCGTGTGGAGAGCTGGGGGATTTGGAACTTGGTACTTGGGTGGAGGAGTTTGTGGTCGAGAATAAGATGGTGTTGAATTCTTTTATAGGTTCTGCATTGATCCATATGTATGGGAAGTGTGGTGATTTAGTGTCAGCAAGGAGGATTTTTGACTCTATGAAGAAGAAAGATAAAGTTACTTGGAATGCCATGATTACAGGGCAAAATGGGATGTCAGAGGAAGCTATTAAATTGTTTCAAGACATGAGAATGAGCAGTACAGCTCCAGATCAAATCACATTGATAGGAATACTTTCTGCCTGTGCCTCAATTGGAGCCCTTGACTTGGGGAAGCAAGTCGAGATTTATGCCTCAGAAAGAGGCTTGCGAGACGACATTTATGTTGCTACTGCATTAGTTGACATGTACGCGAAATGTGGAAGCTTGGATAATGCCTTCAGAGTTTTTTATGGCATGCCTAGGAAAAATGAGGTCTCTTGGAATGCTATGATATCTGCTCTTGCTTTCCATGGCCAAGCTCAAGAAGCTTTGGCATTGTTCAAATCCATGATCAATGAGGGTGGAGCTGCTTCCCCCAATGACATCACATTTGTAGGAGTACTTTCTGCTTGCGTGCACGCAGGATTAGTAGATGAAGGACGTCGGTTGTTTCACCTGATGAGCTCGTCATTTGGATTGGTGCCAAAAATTGAGCATTACTCTTGTATGGTTGACCTTTTGTCACGAGCGGGTCATCTGGAAGAAGCTTGGGACTTTGTAAACAAGATGCCCGAAAAACCAGATGAAGTCATTCTCGGAGCACTGCTTGGTGCTTGTCAAAAGCGCAAGAACGTCGACATTAGTGAGCGTGTAATGAAGCTACTTCTCGAATTGGAACCTTCAAATTCTGGAAATTACGTAATCTCGTCGAGATTATATGCAAATTTGAGAAGATGGGATGACTCAGCCAGGATGAGACTGTTGATGAAGCAAAAGGGTGTTTCTAAGACTCCTGGTTGCAGCTGGATTGATATCAATTCACAACTTCATGAGTTCCATGCTGGCGATGTTTTGCACGAAGAGTGGATTCAAATCCATCAAATCCTAGACTTATTGATTGATGACTTGAGGAGGGAA20040060080010001200140016001800Expect = 2.5E-42 / Score = 147.3Expect = 2.4E-6 / Score = 29.0Expect = 3.7E-23 / Score = 83.8Expect = 8.9E-21 / Score = 76.0Expect = 1.9E-7 / Score = 31.2Expect = 1.8E-10 / Score = 40.9Expect = 7.5E-8 / Score = 32.5Expect = 7.6E-9 / Score = 35.6Expect = 0.0012 / Score = 18.9Expect = 7.6E-10 / Score = 36.4Expect = 4.3E-4 / Score = 18.3Expect = 1.9E-4 / Score = 19.4Expect = 9.1E-5 / Score = 20.4Expect = 3.0E-4 / Score = 18.8Score = 9.525427Score = 10.687325Score = 13.318037Score = 8.6266Score = 8.736214Score = Score = Score = Score = Score = Score = SequenceG3DSA:1.25.40.10G3DSA:1.25.40.10PF13041PF01535TIGR00756PS51375PS51375PS51375PS51375PS51375PTHR47926PTHR47926PTHR47926:SF54PTHR47926:SF54
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 366..582
e-value: 2.5E-42
score: 147.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 249..350
e-value: 8.9E-21
score: 76.0
coord: 15..145
e-value: 2.4E-6
score: 29.0
coord: 151..248
e-value: 3.7E-23
score: 83.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 191..238
e-value: 1.8E-10
score: 40.9
coord: 391..441
e-value: 7.6E-9
score: 35.6
coord: 292..338
e-value: 7.5E-8
score: 32.5
coord: 89..137
e-value: 1.9E-7
score: 31.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 468..495
e-value: 0.0012
score: 18.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 469..494
e-value: 3.0E-4
score: 18.8
coord: 431..464
e-value: 9.1E-5
score: 20.4
coord: 194..228
e-value: 7.6E-10
score: 36.4
coord: 268..293
e-value: 4.3E-4
score: 18.3
coord: 394..423
e-value: 1.9E-4
score: 19.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..125
score: 9.525427
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..426
score: 10.687325
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 192..226
score: 13.318037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..495
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 262..296
score: 8.736214
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 189..303
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 48..189
coord: 289..603
NoneNo IPR availablePANTHERPTHR47926:SF54SUBFAMILY NOT NAMEDcoord: 289..603
NoneNo IPR availablePANTHERPTHR47926:SF54SUBFAMILY NOT NAMEDcoord: 48..189
coord: 189..303