Lsi11G001070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G001070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	50S ribosomal protein L15
Location	chr11: 1148654 .. 1155948 (+)
RNA-Seq Expression	Lsi11G001070
Synteny	Lsi11G001070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGGGTATCGAACCCCGTACCTCTCGCATGCAAAGCGAGCGCTCTACCGTTTGAGCTACATCCCCAGCTTGTTGAATTAACTCTTCATTTATAGCTTAATGGATAATTCAACACCACCACTTTAAACTCTCTTTGTTTTTGTGATTCTTTGCAACCTTTTTTACTATATGTTTCTTTCATTTTCTTTTCATTTCAATTTTGTTGTTTCTGCGTCCATGTATTTTCAAAATTGATACCCAAATTTATTATGCAATGTCAATTAAATTCTTTTTCATCCACTACATTATTCAGAAATAGTTTGAAATTGGAATACATGTGAAAATTGAATAGACTCTCTTGACTGATTTTTAAAATCTACGTAATCACTCATCTCCTAAAAAAGGAAATATTTGAATTCTAAAATTTTCTAAAAATACAATTTGGAAATAAATTAAACATGTAATGAGTCAAAATTTGGTCAAAATTTTGGAACGTCCAAATGCTAGAAGAAACGCCTAAGAATCTTCCCAGAGGAAGCTAGAATCTTCCCAGAGGAAGCTTTTTATGTGAAGAGGCTTAGAGGACCCACGAGGGGGTCTAGCAGAGGCTTAGATAACCCATGGGGAAGTTCATATTAACATGAAGGATTTAGGAGTCACATAAAAAACCCATGAAAGACCTCTGCACGATTCATGGAGGAATTAAAAGTCACATAGAGGACTTTGGAGGACTCGTGGCATACCTTTGCAAGACCCATGGAGAACTAAGGAGTCCTACGAGTAACTTTGAGGACCCTTGAAAATCCTTTGTAGGACCCATGGAGGAGTTAGGAGCTTCATATATGACTTTGGGGGGATTTAGAGGACCCATGGAAGACCTTAGCGCGATCGAGTTTGAAATCGTCTAGATTCTTAACATATGAGTCATGAAGGAATTATTGAGAATTTGAGTGTGGGTGATGCACCTAAGCATTAGCTGCAACCTCAAATGGTATTAGTGGCCAAATGAGTATTAACTTAACGATTCTGGAAATTAAAACGAGCAGTTATGAGCCCGAGTGTTAGTTATGCATTACCATCATATATAAATAACCAAAGTCATTAGTCGAAGGTATGCCTAAAATCATATACTATTTTCTACTGTCAATTTACTCACAAACTCAAGACTACTCGAGTATCGGAGTATATGTGGCTTACATCACACTAGTGCTTAATTTCTTTTGTCTTGTAGGTACTTGGAGTATTTTCTCATAAAACACAAATTTAGGATTGATCCATTTTTTGACATCAACAGACTTTATCTTTAGTTCTAAATATTTTTTAATTATAAATTTTCAATTGTTATACATTCTAATTCAATTCATTTTTTTCAATTTCCTATTTAAACCCTAAATTCCATAAAGTCATGGGTATGAAACGTTTTCTTCAATTTTACGTTTCCTCTTTACATTCTAGTTTTTTTAAGGAAAATTACTATAAACGGGAAAAATATCAAACTATTTACAAATATAGAAAATTTTTACTGTCTATCAGTGATAGATCACGATAAAATTCGATCGCATTCTATCGCTCAAGCAAATAAATTCTATCGTTTGAGCGATAGAAAGCGATAGAATTCTATCGCGGTCTATCACTGATAGACTATAAAATTTTTTTATATTTGTAAATAGTTTGACTCGTTTTTCTATATTTGTAAACAACCATTTTTTTAATTAATTTTCATTGTAAATTTTAAATTTAATCGGATGTTACTTCAATATAAAAAAGTAAAAAGTATTTAGATATCTTATAAATCAAGATAAATGTAAAATTGAAATTAAAATTTAGAAGTGTGACTGTAACAAACTACAAATTGTGATTGAATTTTTATGGGACACAATCTTTTATATGGTTAGTTAAATTTAATAGAATGTAGAAGGGTTAGAGCATAGATTTCTTGATCGAGAATATATTATATATATAAGTTGAGTTATGCTCGTTAGACAATATTTAATTGTCTAAATAATAATAATAAAAAAACGACAATAATAAATAAATAAAGAAACAAAAAGGGTAACCCTGATTCCCCCTTGCTTCCCCACTTCACTCTCTCTCTTCCTCTCTTCAGTCGCACAGCTCCGCCCAACTCACACCATTTCTTCGTCTTCCTTCCGCCTGCGGCGTTTGTCGAGCAGCGCAACCCACCACCAATCTTTGGAGAGCCTTGGCGGCACGAGCTCTAGTTCTACGGTAGCAACGTCCGCTTACAGCAGATCCACACAACCTCGACGGCGTCTTGTTGCGCACCACGGCAGCGACCTCAACGTCCAGTTCCAGAGACGTTACTTTCCACGCGTTTATTGGCCGAATAGCGACTTTCAGCAGCAACCCACTCCTTTATTCACCTCGATTCAGTTTGCCCGTATTCCGTAGGGGTCACATTTACGATTTTCAACTCGATCACGTTTCAGCAAAGATTCGAGTCCTTTCGGTAAAGTTTCATGGTTAAATTTGATCTAATCTGTTTCGGATTGAATTTTATTGTTTGAATTCGATTCTATTGATTGTAGCTCTTCTGTTTTAGGTTCTTACTAGTTTCCAACTCTTTCGAACACCTTTCAGCAAAGACCCGAGCTCTTTTTGGTAAGATTTGGGCGGTAACGGTGCTTTGAAACCCTTTCGAACTCGGATGAAATGATTTAGATTTATGTCTACCCTAGGGAACTCGTGGTTGTAGATCCAGACTCATTCGGAGTGTTCATACTAAGGTTTAAGGTCGGTTTTTGGTACGCCCTCTTGAATACTCTTGTCAACTCAATTCAAACCGCTAAGTATTGTCTTTTTTGTCTAGAACTCTTTGGGCTAATTTAGGAGCACTGTAGGCAAGTAGAGTTTACTCGTTGGGTCTGTATGTTGTTTGCTATTTTGCTGTGCTTTATTTGTGCTATTATTATTTATGATGTAAATACTTGACACTCTTAAACTTTTAGGTGCTTTGGATGTTTAAGCTTGCAGGAATGTTGTAATGATGTTGTGACGACTAACATGCTGGGAAGTGGTTGTAGATCTTATGTTTATAAGCACGTGCTACTATTGAAAACGTCTGATTAAGCATATGATTTCTGTTGAGGACACTATTGTTTTATTGTGGTTTTGACATAGAGAAGGGTTAGAATCATATTGTTAGACTCATACATTTGAGTGGGATTGTGTGAGAAAGAAGTTCAAAGTAGTTCGTGCATTTATGAAGGAAAGTGGGTGCATATCGGTGTGCCTTAGGTAAAAATGGTCACGAGGTGACATGTTATTGTTGGGGAGGGGTAAAAATGATCAATGGTCTACGTAAGGAGTCTACAAAGGCAAATATTGGTGCTCTTGCGAGAGAGGTACAATATGTTGCTTAGTCATTGAGACATTGGATAAAAATGGTCGAGGGTCAAATGCCGAGCGTCGCAGAGAACATTGAGGCCCAAGATAAAAATTGTAAGGGGTTCCCGCATCTTGAAGGAATCAGTCTCAGGGAGCTTTGGGAGGGCTAAATATGAGTGTCGAGTAGTTGAGTTGAGTGAGCTCATGAAGCTTGCGTAGAGATTGAGTGTGCGTTACATGGCGTGTTGAGTAAAAATCATCAGTACCTATAAAATTTGTTGGTGGCTCAGTACAGAAATGCATACTGAGTAAGCAACTCACACTCGAGTAGCCACCAAATAGCCTACAAGGCAAACATCATGCTATTCACAACAGTTTTATTAGATTTTTAGATCCATCCCCAAGGTTTTGATTTTCTGTTTAATGTTTGATTTGCCTTATCTTTGAACTACCGAACTGTACCTATGATTGAGGGTTGAGGGAGTTTTATTCTTATCATCTATTTTCACAACATAACTTTATCCTTTTTTTAAAAAAATAAAAATAAATTCTACATATCTGTATTGCGTCTCACGTCCTTGTGCTATAATAGTCGCATCATGTTTTGAATTATGTAGGTGACTTTGTTAAGTGTCACTAGGATATGAGGAAAAAACCTATTGTAAACTTCGTATGCATGGTCAAGCTAGATAACACTTGATATTTCTGTATATCACAAAATTAATCTATTTCATTCATAATGCAGCAATCATTCAGTCTATATCCCGCACTGGCTTGAGGAACATAGCCAACTGGTGCAGTTTATAATTCGAACAGAAAAAGGAAGAGGAAATGCTACGAAGACGACTGTGTTACTTGCTATCTAGCTCACTTGCCTCTGTTCATTCTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCACGTCCATTCCTAGAGTTCCAGCAAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGAAATATCTTTGGTTTTCGAGCTTACAGCCTTTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGCGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGGAGAGGTCACAAGGGCCAAAGAGCGAGAGGCTCTGGGAAGCTTGGGTTTGAAGGGGGTCAAACTCCACTTCGTCGCAGGCTTCCTAAAAGAGGCTTTAAAAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTATGTTTTCATCTTATTGCTTTGTTGCCTGTGATCTGTGTTTTAAAAAGCCCACAGCCCACTGAGGCATGCACCTTGGTGCGCTTAAGCTCAAGGCACAACCTTTGTGCGACTGTGCCTCGCTTCTTTAATGAAGCCTACTTGAGGCGTGTGTCTCAAGGCTTGTGATGTGCTTCTCAATGCCTCAAGTTTGATTTCTTACCCTTTTTTTTTCTAGTTTTTAAGAAATAATTATATTAATATTCTTACCATCTCGAATAAAGGTTCTATTTTCTTGAGCTTTTCATTATATTCACCATACTAATTTCCTTCGTACGTCAAAACTTTGTTTACATTTTTCTATTGTATGCCTCATTAAAACAACCTGCGCTTAAGCACTGCATTTTGCATTACTTAATGCACAGCAGATTTGGTATCTTCTGATGTTTGATCCCTAGCAATATTATTTTTGATAGTGTAAAAGACAAATATTTGTTTGGGCAGAATAATTTTTCCTTTGAGTATTATGCTCCTATTTCTTTTGTTTGATTCTTTCTCTTGTTTTACGACAGCCAGTTGGTTTGGGAAAGATTGCTAAACTCATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACTCTCAAGGTATTACGTGACGTCTATCTTGATTAGTTTATCAAAAGCCTGAAGTACTTGTTTTTTACTATTGTATCATATTATTATACTTACCATTATGAAAATAGGATACAGGTGCCATTGGAAAACAAATAGAGGATGGAGTAAGATTGATGGGACGTGGTGCCGAACAGATTAAGTGGCCAATTCACCTAGAGGTAAATCTTCAACTAAAAATGTTTTTCTTTTTCCCTTCTGACGTTGACTTCAAAACCTATATGCTCCTTAGGTAAGCTGCTGTTCTGTAAAAATCATTCATAATTCTGGGGTATTGTCATGCGACTAATTTGAAGCTAGTGTACTCTTCCCAGCAGGTTCTAGTGTTGCAGATGTCTTTCCAAGGGTTGCATTTAGCTTTCTTTCTAGTCTGGTTCGGGATCCAATTGCCCTTATTTGCTATAACATAATGAATATGTTAGGTTTCAATCCCTGCACTCAGTAAAATCCAACAAGAAGCAACAAATACATAACAATATCTACTCTGTTTTACAATGTATTTCCAAATAGAAGTTCCAAAGCAACAATATAACTACATGAGTATTCGATCACAGTATAATAAAGTTCAAAAAAATAGCTCCAGCACATTCGAAAGAGCGGGATATTGTTAGGTACTTAAGCATCTTGGAGAACCACACTCCAAATGCCACCTATTGAGGTGAGACCACCAAGTCACTTAAGTACTACATTGGTCATTTCATTCTAACCGATGTGGGATAAAGGTAACCTATACTACCTTGGTTCCTGACAATACCCCATTCCTAGAGAGCCGACGTTCTAGTGGCTAGGCCGATGGTACTTCACTCAAAAACACCCAACCAGAAGCCTTCGCCGGTACTCCTTTGGAACGTCGATAACCGGCTCCGATACTTTTGTTAGGTACTTAAGCACCTTGGAGAACCACATCCCAAAAGCCAACTATTGAGGTGAGAGAGCCAAGCCACTCAAGACCATATTGGCCATCCTATTCTAACCAATGTAAATTAAGCACGTCAATCACAAGCAATGGTTATCCCCCTTCGAGAGTATGTATAAAGGATTCAGAGTCTCAAAGACTTTCTGTTTGTGTAGCTTTGCTGACATTGTTATTTGCTTGTGATTGACGTGCTGAGTTTGCGTAGTGTTGGAAAAAAAACAATTTAGAGATTGCAAAACTTTTATGTTCAAGTTTTGTGATAGTCAAGTCTCAAGTCTCTCATCTTTAACCAAGTGGATTGGTCCAATAGCCTCAGATATTGCTAGCAAGAGCTTCTTGCACTTGGAACTAATCTTAAATGTGTGATGTTTTCAGGTGTCGAGGGTCACTGTTAGGGCGAAGGAAGCTGTCGAAGCTGCCGGTGGGACTGTTCGGAGAGTGTATTACAATAAACTAGGCTTTCGGGCGCTTCTCAAGCCTGAGTGGTTTGAAAAGAAAGGCAGACTCCTGCCACGAGCGGCGAGGCCACCACCAAAGCAGCGAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCCATTCCTTTTTCAGTTGAAGATGAAGATGGAGGAAGGGCAGCTTCCAATTTGTCTACCTAATCATAGTCATCAGACTTCGAATGAAGGAATTTAACTTTTGGTTGCCTTTTTCAAATGCGTTTTCTCTAGCAATCTGGTCATGATTTTGCTAATGTTAGTGTTCACACATTTCTTAGGATTAATGATGGACGTTGGCCGCTCTTCACCTGAGATTTTAAGGATTCAGGGTGGCAATAAAAATCACTGTCATCTTATCTACTATCAAGTTCAATATAAGATAATATGTGCATAACTCTGAGATATATATTTTTGTTAAATTAACAATTTGGTCCATATGATTTGAAAAAAATTAAGAATTTAGTCCTTATGGTTTGAAAAGAATTAGAATTTAGTCTCCATAATTTTAAATGTTAGAGTTTGGTCCCTATGGTTTGGAGAAATTTATAATTTAGACCCTGTAGTTTAGAAAAAGTTAGAATTTAATCCTTATCCTAGGGACTACTTATGAGACTTTATCAAACTATAGAGACTAAATTCTAATTTTAAGCTATA

mRNA sequence

ATGCGGGTCGCACAGCTCCGCCCAACTCACACCATTTCTTCGTCTTCCTTCCGCCTGCGGCGTTTGTCGAGCAGCGCAACCCACCACCAATCTTTGGAGAGCCTTGGCGGCACGAGCTCTAGTTCTACGGTAGCAACGTCCGCTTACAGCAGATCCACACAACCTCGACGGCGTCTTAAAAAGGAAGAGGAAATGCTACGAAGACGACTGTGTTACTTGCTATCTAGCTCACTTGCCTCTGTTCATTCTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCACGTCCATTCCTAGAGTTCCAGCAAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGAAATATCTTTGGTTTTCGAGCTTACAGCCTTTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGCGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGGAGAGGTCACAAGGGCCAAAGAGCGAGAGGCTCTGGGAAGCTTGGGTTTGAAGGGGGTCAAACTCCACTTCGTCGCAGGCTTCCTAAAAGAGGCTTTAAAAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTCATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACTCTCAAGGATACAGGTGCCATTGGAAAACAAATAGAGGATGGAGTAAGATTGATGGGACGTGGTGCCGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGTTAGGGCGAAGGAAGCTGTCGAAGCTGCCGGTGGGACTGTTCGGAGAGTGTATTACAATAAACTAGGCTTTCGGGCGCTTCTCAAGCCTGAGTGGTTTGAAAAGAAAGGCAGACTCCTGCCACGAGCGGCGAGGCCACCACCAAAGCAGCGAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCCATTCCTTTTTCAGTTGAAGATGAAGATGGAGGAAGGGCAGCTTCCAATTTGTCTACCTAATCATAGTCATCAGACTTCGAATGAAGGAATTTAACTTTTGGTTGCCTTTTTCAAATGCGTTTTCTCTAGCAATCTGGTCATGATTTTGCTAATGTTAGTGTTCACACATTTCTTAGGATTAATGATGGACGTTGGCCGCTCTTCACCTGAGATTTTAAGGATTCAGGGTGGCAATAAAAATCACTGTCATCTTATCTACTATCAAGTTCAATATAAGATAATATGTGCATAACTCTGAGATATATATTTTTGTTAAATTAACAATTTGGTCCATATGATTTGAAAAAAATTAAGAATTTAGTCCTTATGGTTTGAAAAGAATTAGAATTTAGTCTCCATAATTTTAAATGTTAGAGTTTGGTCCCTATGGTTTGGAGAAATTTATAATTTAGACCCTGTAGTTTAGAAAAAGTTAGAATTTAATCCTTATCCTAGGGACTACTTATGAGACTTTATCAAACTATAGAGACTAAATTCTAATTTTAAGCTATA

Coding sequence (CDS)

ATGCGGGTCGCACAGCTCCGCCCAACTCACACCATTTCTTCGTCTTCCTTCCGCCTGCGGCGTTTGTCGAGCAGCGCAACCCACCACCAATCTTTGGAGAGCCTTGGCGGCACGAGCTCTAGTTCTACGGTAGCAACGTCCGCTTACAGCAGATCCACACAACCTCGACGGCGTCTTAAAAAGGAAGAGGAAATGCTACGAAGACGACTGTGTTACTTGCTATCTAGCTCACTTGCCTCTGTTCATTCTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCACGTCCATTCCTAGAGTTCCAGCAAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGAAATATCTTTGGTTTTCGAGCTTACAGCCTTTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGCGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGGAGAGGTCACAAGGGCCAAAGAGCGAGAGGCTCTGGGAAGCTTGGGTTTGAAGGGGGTCAAACTCCACTTCGTCGCAGGCTTCCTAAAAGAGGCTTTAAAAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTCATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACTCTCAAGGATACAGGTGCCATTGGAAAACAAATAGAGGATGGAGTAAGATTGATGGGACGTGGTGCCGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGTTAGGGCGAAGGAAGCTGTCGAAGCTGCCGGTGGGACTGTTCGGAGAGTGTATTACAATAAACTAGGCTTTCGGGCGCTTCTCAAGCCTGAGTGGTTTGAAAAGAAAGGCAGACTCCTGCCACGAGCGGCGAGGCCACCACCAAAGCAGCGAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCCATTCCTTTTTCAGTTGAAGATGAAGATGGAGGAAGGGCAGCTTCCAATTTGTCTACCTAA

Protein sequence

MRVAQLRPTHTISSSSFRLRRLSSSATHHQSLESLGGTSSSSTVATSAYSRSTQPRRRLKKEEEMLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLPRAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST

Homology

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BLAST of Lsi11G001070 vs. ExPASy Swiss-Prot
Match: Q211G7 (50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplO PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 129 LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKL-GFEGGQTPLRRRL 188
           + L+D+ D    RK++ R GRGIGSGKGKTAGRG KGQ AR   ++ GFEGGQ PL RRL
Sbjct: 1   MKLSDIADNAGSRKKRMRVGRGIGSGKGKTAGRGGKGQTARSGVRIKGFEGGQMPLHRRL 60

Query: 189 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 248
           PKRGF N F L F  + L ++ + ++A  ID S +I  +TL  +G + ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFRLDFAEINLDRLQEAVDAKTIDGSGVINAETLVASGVL-RRAKDGVRLLGR 120

Query: 249 GAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVR 279
           G  ++K  + +EV   T  A EAVE AGGTV+
Sbjct: 121 G--ELKAKLTIEVHGATKTAIEAVEKAGGTVK 149

[Close]

BLAST of Lsi11G001070 vs. ExPASy Swiss-Prot
Match: Q2RQX9 (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rplO PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.0e-28
Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 129 LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKLGFEGGQTPLRRRL 188
           + LN+LRD     K + R GRGIGSGKGKTAGRG KGQ++R G    GFEGGQ P+ RRL
Sbjct: 1   MKLNELRDNPGATKNRIRVGRGIGSGKGKTAGRGVKGQKSREGVSINGFEGGQMPIYRRL 60

Query: 189 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 248
           PKRGF NP   +F  V L +I K I+A K+D++ +IT K L + G + ++ +DGVRL+G+
Sbjct: 61  PKRGFNNPTRKSFAVVNLDRIQKAIDAKKLDATAVITEKALIEAGLV-RRSQDGVRLLGK 120

Query: 249 GAEQIKWPIHLEVSRVTVRAKEAVEAAGGTV 278
           G   +K  + +EV+  +  A+E VE AGGT+
Sbjct: 121 GELSVK--VAIEVAGASATAREGVEKAGGTL 148

[Close]

BLAST of Lsi11G001070 vs. ExPASy Swiss-Prot
Match: A4YSL1 (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.1e-28
Identity = 75/152 (49.34%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 129 LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKL-GFEGGQTPLRRRL 188
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 189 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 248
           PKRGF N F+L F  + L +I + I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGR 120

Query: 249 GAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVR 279
           G  ++K  I++EV   +  A  AVE AGGTV+
Sbjct: 121 G--ELKAKINIEVYGASKSAIAAVEKAGGTVK 149

[Close]

BLAST of Lsi11G001070 vs. ExPASy Swiss-Prot
Match: A9H3K5 (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5) OX=272568 GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.1e-28
Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 129 LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKLGFEGGQTPLRRRL 188
           ++LN+LRD    R +K R GRGIGSGKGKT+G+G KGQ+AR G    GFEGGQ PL RRL
Sbjct: 1   MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREGVSLNGFEGGQLPLYRRL 60

Query: 189 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 248
           PKRGFKN F   + PV LG + K I  GKID+  ++T   L+  G +G     GVRL+ +
Sbjct: 61  PKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAK 120

Query: 249 GAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVR 279
           G  ++   + +EVS  +  A  AVE AGG+VR
Sbjct: 121 G--ELARAVTIEVSGASATAVAAVEKAGGSVR 150

[Close]

BLAST of Lsi11G001070 vs. ExPASy Swiss-Prot
Match: A7IPQ1 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=rplO PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-28
Identity = 77/151 (50.99%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 129 LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKLGFEGGQTPLRRRL 188
           ++L D+RD    RK++ R GRGIGSGKGKTAGRG KGQ+AR G    GFEGGQ PL RRL
Sbjct: 1   MNLEDIRDNPGARKKRMRVGRGIGSGKGKTAGRGVKGQKARTGVAIKGFEGGQMPLHRRL 60

Query: 189 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 248
           PKRGF N F L +  V LGKI   + AGK+D+ + +T   L   G + ++ +DGVR++G 
Sbjct: 61  PKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGT 120

Query: 249 GAEQIKWPIHLEVSRVTVRAKEAVEAAGGTV 278
           G  ++   + LEV+  T  A  AVE AGG+V
Sbjct: 121 G--ELSAKVTLEVAYATKSAVAAVEKAGGSV 148

[Close]

BLAST of Lsi11G001070 vs. ExPASy TrEMBL
Match: A0A1S4E3M6 (50S ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103499363 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.8e-146
Identity = 270/284 (95.07%), Postives = 275/284 (96.83%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRR+LCYLLSSSLASV +KPPPAIVINQAL  PFLEFQQNP LDR VG PLSGNIFGFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST 349
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSVE EDGG+AASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of Lsi11G001070 vs. ExPASy TrEMBL
Match: A0A0A0KP79 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G532450 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.4e-145
Identity = 271/284 (95.42%), Postives = 275/284 (96.83%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLC LLSSSLASVH+KPPPAIVINQALSRPFLEFQQNP LDR VG   SGNIFGFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST 349
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSVE EDGG+AASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of Lsi11G001070 vs. ExPASy TrEMBL
Match: A0A6J1EYQ5 (uncharacterized protein LOC111439779 OS=Cucurbita moschata OX=3662 GN=LOC111439779 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.9e-144
Identity = 265/282 (93.97%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLCYLLSSS ASV +KPPPA  INQA+SRPFLEFQQNPSLDRSVGFPLSGN+ GFR
Sbjct: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVLGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAEQIKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNL 347
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 280

[Close]

BLAST of Lsi11G001070 vs. ExPASy TrEMBL
Match: A0A6J1K819 (uncharacterized protein LOC111493075 OS=Cucurbita maxima OX=3661 GN=LOC111493075 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.1e-142
Identity = 262/282 (92.91%), Postives = 272/282 (96.45%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLCYLLSSS ASV +KPPPA  INQA+SRPFLEFQ+NPSLDRSVGFPLSGN+ GFR
Sbjct: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           AYS+LSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSILSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAEQIKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLGF+ALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNL 347
           RAARPPPKQ+DKVDSIGRLPAPTKPIPF V  EDGG AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWV--EDGGDAASSL 280

[Close]

BLAST of Lsi11G001070 vs. ExPASy TrEMBL
Match: A0A6J1DT01 (uncharacterized protein LOC111024111 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024111 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.7e-138
Identity = 259/284 (91.20%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           ML RRL +LLSSS AS  +KP P IV  QALS PFLEFQ+N SLDR+VGFPLSGN+ GFR
Sbjct: 1   MLGRRLSFLLSSSFASAWTKPTPTIVTKQALSYPFLEFQRNSSLDRTVGFPLSGNVLGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           AYSLLSLNDLRDK PRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKAPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGGTVR+VYYNKLGFRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRKVYYNKLGFRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST 349
           RAARPPPKQRDKVDSIGRLPAPTKPIPFSVE EDGG AAS+LST
Sbjct: 241 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEVEDGG-AASSLST 283

[Close]

BLAST of Lsi11G001070 vs. NCBI nr
Match: XP_038893364.1 (50S ribosomal protein L15 [Benincasa hispida])

HSP 1 Score: 535.4 bits (1378), Expect = 3.6e-148
Identity = 274/284 (96.48%), Postives = 277/284 (97.54%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLCYLLSSSLASVH+KPPP  VINQALSRPFLEFQQNPSLDR VGFP S NIFGFR
Sbjct: 1   MLRRRLCYLLSSSLASVHTKPPPTSVINQALSRPFLEFQQNPSLDRHVGFPHSVNIFGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST 349
           RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDE+ G+AASNLST
Sbjct: 241 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEERGKAASNLST 284

[Close]

BLAST of Lsi11G001070 vs. NCBI nr
Match: XP_008460571.1 (PREDICTED: 50S ribosomal protein L15 [Cucumis melo] >XP_016902580.1 PREDICTED: 50S ribosomal protein L15 [Cucumis melo])

HSP 1 Score: 527.3 bits (1357), Expect = 9.8e-146
Identity = 270/284 (95.07%), Postives = 275/284 (96.83%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRR+LCYLLSSSLASV +KPPPAIVINQAL  PFLEFQQNP LDR VG PLSGNIFGFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST 349
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSVE EDGG+AASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of Lsi11G001070 vs. NCBI nr
Match: XP_004142813.1 (uncharacterized protein LOC101207666 [Cucumis sativus] >XP_011655431.1 uncharacterized protein LOC101207666 [Cucumis sativus] >KGN51413.1 hypothetical protein Csa_008974 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 2.9e-145
Identity = 271/284 (95.42%), Postives = 275/284 (96.83%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLC LLSSSLASVH+KPPPAIVINQALSRPFLEFQQNP LDR VG   SGNIFGFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNLST 349
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSVE EDGG+AASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of Lsi11G001070 vs. NCBI nr
Match: XP_022933073.1 (uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933074.1 uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933075.1 uncharacterized protein LOC111439779 [Cucurbita moschata])

HSP 1 Score: 519.6 bits (1337), Expect = 2.1e-143
Identity = 265/282 (93.97%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLCYLLSSS ASV +KPPPA  INQA+SRPFLEFQQNPSLDRSVGFPLSGN+ GFR
Sbjct: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVLGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAEQIKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNL 347
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 280

[Close]

BLAST of Lsi11G001070 vs. NCBI nr
Match: KAG7032432.1 (rplO [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.1 bits (1333), Expect = 6.0e-143
Identity = 264/282 (93.62%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSLASVHSKPPPAIVINQALSRPFLEFQQNPSLDRSVGFPLSGNIFGFR 124
           MLRRRLCY+LSSS ASV +KPPPA  INQA+SRPFLEFQ+NPSLDRSVGFPLSGN+ GFR
Sbjct: 1   MLRRRLCYVLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60

Query: 125 AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 184
           AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 185 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 244
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180

Query: 245 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 304
           GRGAEQIKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240

Query: 305 RAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDEDGGRAASNL 347
           RAARPPPKQ+DKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 280

[Close]

BLAST of Lsi11G001070 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 389.4 bits (999), Expect = 3.0e-108
Identity = 210/282 (74.47%), Postives = 228/282 (80.85%), Query Frame = 0


Query: 65  MLRRRLCYLLSSSL--ASVHSKPPPAIVINQALSRPFLEFQQNP-------SLDRSVGFP 124
           MLRRRL  ++S+SL  +S H    P  +I    S P L+ + +P       S  R++ F 
Sbjct: 1   MLRRRLLSIISTSLINSSFHQTAKPRFII----SSPLLQCRPSPISTQIPTSTSRALSFQ 60

Query: 125 LSGNIFGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGF 184
                 G RAYSLLSLNDLRD VPRK KTRKGRGIGSGKGKTAGRGHKGQ+ARG+ K GF
Sbjct: 61  ------GIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGF 120

Query: 185 EGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGK 244
           EGGQTPLRRRLPKRGFKN F L FQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGK
Sbjct: 121 EGGQTPLRRRLPKRGFKNKFKLHFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAIGK 180

Query: 245 QIEDGVRLMGRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKPEW 304
           QIEDGVRLMGRGA+ IKWP+H EVSRVTVRAKE VEAAGG+VRRVYYNKLG RALLKPEW
Sbjct: 181 QIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEAAGGSVRRVYYNKLGLRALLKPEW 240

Query: 305 FEKKGRLLPRAARPPPKQRDKVDSIGRLPAPTKPIPFSVEDE 338
           FEKKGRLLP+AARPPPKQ+DKVDSIGRLPAP KPIPF   +E
Sbjct: 241 FEKKGRLLPKAARPPPKQQDKVDSIGRLPAPKKPIPFFAAEE 272

[Close]

BLAST of Lsi11G001070 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 )

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-09
Identity = 61/188 (32.45%), Postives = 96/188 (51.06%), Query Frame = 0


Query: 140 RKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKL-GFEGGQTPLRRRLPK-RGFKNPFS 199
           RK++ RKGRGI +G+G + G G +GQ++R G G + GFEGGQT L RRLPK RG      
Sbjct: 93  RKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR 152

Query: 200 LTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAI---GKQIEDGVRLMGRGAEQIKW 259
            +  P  L    K I        + ++++TLK  G I   G++ +  ++++G G  ++  
Sbjct: 153 -SGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTG--ELSM 212

Query: 260 PIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGFRALLKP----------EWFEKKGRLL 312
            +  +    + +AKE +EA+G T+  +     G +  +KP          E+F KK    
Sbjct: 213 KLTFKARAFSTQAKEKLEASGCTLTVL----PGRKKWVKPSVAKNQARADEYFAKKRAAA 272

The following BLAST results are available for this feature:

BLAST of Lsi11G001070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q211G7	1.7e-28	50.66	50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605...	[more]
Q2RQX9	3.0e-28	50.33	50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1....	[more]
A4YSL1	5.1e-28	49.34	50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=rp...	[more]
A9H3K5	5.1e-28	50.66	50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
A7IPQ1	6.6e-28	50.99	50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / ...	[more]

BLAST of Lsi11G001070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3M6	4.8e-146	95.07	50S ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103499363 PE=3 SV=1	[more]
A0A0A0KP79	1.4e-145	95.42	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1EYQ5	9.9e-144	93.97	uncharacterized protein LOC111439779 OS=Cucurbita moschata OX=3662 GN=LOC1114397...	[more]
A0A6J1K819	7.1e-142	92.91	uncharacterized protein LOC111493075 OS=Cucurbita maxima OX=3661 GN=LOC111493075...	[more]
A0A6J1DT01	3.7e-138	91.20	uncharacterized protein LOC111024111 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lsi11G001070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893364.1	3.6e-148	96.48	50S ribosomal protein L15 [Benincasa hispida]	[more]
XP_008460571.1	9.8e-146	95.07	PREDICTED: 50S ribosomal protein L15 [Cucumis melo] >XP_016902580.1 PREDICTED: 5...	[more]
XP_004142813.1	2.9e-145	95.42	uncharacterized protein LOC101207666 [Cucumis sativus] >XP_011655431.1 uncharact...	[more]
XP_022933073.1	2.1e-143	93.97	uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933074.1 unchar...	[more]
KAG7032432.1	6.0e-143	93.62	rplO [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi11G001070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64670.1	3.0e-108	74.47	Ribosomal protein L18e/L15 superfamily protein	[more]
AT3G25920.1	3.2e-09	32.45	ribosomal protein L15	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 154..277 e-value: 1.1E-31 score: 110.2
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAM	TIGR01071	TIGR01071	coord: 131..277 e-value: 4.6E-38 score: 128.3
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 65..337
None	No IPR available	GENE3D	3.100.10.10		coord: 195..280 e-value: 1.1E-12 score: 49.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..61
None	No IPR available	PANTHER	PTHR12934:SF14	BNAA06G23640D PROTEIN	coord: 65..337
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 131..280 score: 19.153786
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 139..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G001070.1	Lsi11G001070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome