Lsi10G015340 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G015340
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr10: 19741840 .. 19745177 (-)
RNA-Seq ExpressionLsi10G015340
SyntenyLsi10G015340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGACATAAAAAATCAAAACCAACTTCCATTTTCCACTACTTGGATTTGGAATCAAAATTATCTCTTACATGTATTCCCCCATTTCCTTCATTCAATGTGAAAAGACGTGTCCCCACATCACCACTCAAAATCCTCATTTCCACATGCAATTCCCAAACTTTCATCACTGCCCTACCACTGCCACCCAACCCATTAAATTTTAAACAACATTAAAAACCAAACCCAAGCTTATAGAAAAAAAAAAAGAAAAAAACTTTCCTATCTCTCTCTCTCTCTCCATCCATTTTTATTTGGGTCCAAAAAGAAACCAAAGCATTGATTGCTAAGGATGAAAATTAGGCAGCCCTGACTCTGACCTCTTTTAGCTTTTTGGTAGGGTACCCTACTACTCAAAGGACCAACCCACCCCAAAAAAAAAAAAAAATCAGTGTACAGTATTTAATTTCTCACTTTGTTCTCCCACCCCTCCCTACTTCTCTTTCACTCTTTCCAACATAGGTTTTGATTTGATGAAGGCCATAAATTATTACTTTAGAGTTAAAGCATCCTTCACTATAAGCAATGTATTAGTCCCCTTATAATGATGCCTCAACAAACTATCTATTTATTTGTGTGTGGAAAAAGAAGATGATGATAATGATTATGATTTATACCTCTATTTCTTTGTTGCTTCACATTTAGGAACCTTATTCATTAAATAACAAGCTCTCTTTTTATTTTCTCTTCTTCCTTAGTCTGTCTCTTTCTTCGATATCGTCGAAAGAGATAGGTGAACTCAAGACAAATTTAAAAGGATTTTTTCCCCCTTCAATATGGGGTGTGGGTGAGATGAATAAGATTCCCTTTAAAAAAAAAAAAAGCCTCAAAGATAGAGATTTTGAAAGAGAAAGAGAGTGGTATGGAGAATCTTAAAACGTGAAGGTTAAAAGAGAGTGGACTATGGAGATCACATGTGGAATATTAAGCCAACACCACTTGAAAAAAAAGAGAAAAGAAAAGCAACCTCATCATCAAGTGAATTAATAAAGATGCAAATAACTTAGTAAAGAGACATTTAAAAAGTGTTCATATATAAAGTCACAAACAAACACAAAATCCTCCTAAATCATTTTTCTATCTTCCCGTTCAGATTTAAAATGAACAATATCATATTATCCTAAATATACTTAAAAAAAAATAAGTTCGTGATGCATCTTTCGAAGATTTACTATTGGTTTGATGAAGAGACAACAATCTAAGGTGTCATTTCATATAAAGCAACGCATGACCTATGATGTTAATACTAGCATCCACCACCCTCTTTCCCCTTTTCCCTACTTTGATTTTTTTTTTTTTTAATTGCTTTTTGGTGATTTTTTTTTTCTTTTTTAGCTTTTTTGTGGTGTGGTTTAACAAAAGCACTATATGTATGGATGATGCAAGAGAAGCAATAAGGTTAGAAAGAAAAAAAAGAAAAGAGATTATTATTAAAGTTTGTAAGTAAAAATTCTTAGCAACTTTTTATCTACTCTCAACTCAATATTTTTTTTAATTTCTCTCTCTCTTTATAAAGTTTCATAATTATGTTGTGTCAATGATGTTGGTCCAACTCTGACAGTCATATGTAATTAATATGCCCCCTTTGCCTTCCTTTTAATTTATTTCACAATTTTTTTTCTTTCTCTTTCGTCCTTTTATCATTCATAGTGGTTGGTAGCTAGCTCTACCTTCACACTCTATAAATATCCATTTATATAACCAAAATTATGAAAACAAAATTAGAAATTAGAAATCTCATTAAATTAAAGGTTTAGTTAAAAAAAAAAACGTCTTAGTTTCTGTCTATCTATAGTCTATAAACTTCATATGTACTTGATTTTTTGTTCATTTAAGTATATAATAATTATAGAGATTGAGAAATCGAACCTCCAACTTCAAATAAGAGATTGCATGCAATTTATCCTTATTTTGATTGGTAGTTGAAAAATTTTAACTAAATTTTTAACATATTTCAAATTTTTTTAAAATTAACTTAATTTTTAAATTTAAAGTGTTTGTGAGTTTTAAAAATCTATTGAATAAATCAATAACATATCGGATACAATATAAAAAATTGATCTATTGGACACCAAATTAAAAGGTGAAGAGGACACGCTATTTAAAGTTTGGAAAAGACTTAGATTTCGTTTGATAATTATTTGATTTTTTTAAAAATTATTCATTTTTCACACAACTTTTTTACCACAATTTCCATAAAAACAAAAAATGAGACAATTGCAAATATAACAATTAGATTCAAAGTATTAGCAAATATAACAATATTTAAAAAAAATTGCCAATATAGTAAAGTTTATTAGTGATAGACTTCTAAGTCTATCGATGATAGACTTTTATGCTCTATCATTAATAAACTACGAGCCATAGAAGTCTCATTGATAGATTTTTGCTATATTTGTAATTTTTTAAAGATGTTATTATACATTTTATTATTATCCCTAAAATTGCTATTCATTATGATTATCAAAAAATTTATCAACTAAATTTGTAATTCAATCTAGAAAATTCGTTTTTTTAAAGATTTTAAACGGTTGTGATAATTCTGATTATTTCTCCCAATCACGGTAAAGATGGGAATTAAATCGAAATAAACGGACGGCTAAGATATAGAGGATCGCTGGTAAAGCGTCGTTATAAATATGTGGTTACTTAAATCGAATCAACATAATTAATTAGTGTTTAAAAATGGAGTTTAATTCATAATTGGTCGTAAACAGTGCAGAAAGGTTCAAACTTCAAAGCTCATGGTGATTTTTTTTCCCTTTATTTTATTATATAACATCAAAAAAAAAAAAAAAACAAATTTGTTTTTTTAAAAAAGGAAAAAAAGTGACAAGTCGGTTACACCATACCCGAAAACCCCCCCACTCTCCTTACGTGCGTCGTCTGCTTCAATACGACACGTGGCAGATACCCACAATGTCAGTCATTATAATTTCACAACTCCTCGGTTATTATTATTATTATTATTTTTTTTAGCCCTCGGGAAATTAATACTGTTTATTAAAGAACCAATCCAATATTCCGTTGGAAAAGGTCATAAATCTCGGAAATGCCCTCGTAAGTTTCCAGAAATTACGGAATTGACCAGATCCCTGTTTCTTTTGCGCTCTTACCTATAAATACAACGCTCAGATTAAATCTCTTCTGAATACATTTTTTTTTTATATATATGAAAACCTAAATTTCAATTTCCCAGAAGAACAAATTCAATTCGTTTCAAAACGCAGTGATTTGAAGGAAACGAAGAAGAAGAAGAAGAAGAAAACAGAGAGATCGATTTCATTTCTGGTTTGA

mRNA sequence

ATGACAGACATAAAAAATCAAAACCAACTTCCATTTTCCACTACTTGGATTTGGAATCAAAATTATCTCTTACATCTTTTTGGTAGGTCTGTCTCTTTCTTCGATATCGTCGAAAGAGATAGCTTTTTTGTGGTGTGGTTTAACAAAAGCACTATATGTATGGATGATGCAAGAGAAGCAATAAGGTTAGAAAGAAAAAAAAGAAAAGAGATTATTATTAAAGTTTCCCTCGGGAAATTAATACTGTTTATTAAAGAACCAATCCAATATTCCGTTGGAAAAGGTCATAAATCTCGGAAATGCCCTCAAGAACAAATTCAATTCGTTTCAAAACGCAGTGATTTGAAGGAAACGAAGAAGAAGAAGAAGAAGAAAACAGAGAGATCGATTTCATTTCTGGTTTGA

Coding sequence (CDS)

ATGACAGACATAAAAAATCAAAACCAACTTCCATTTTCCACTACTTGGATTTGGAATCAAAATTATCTCTTACATCTTTTTGGTAGGTCTGTCTCTTTCTTCGATATCGTCGAAAGAGATAGCTTTTTTGTGGTGTGGTTTAACAAAAGCACTATATGTATGGATGATGCAAGAGAAGCAATAAGGTTAGAAAGAAAAAAAAGAAAAGAGATTATTATTAAAGTTTCCCTCGGGAAATTAATACTGTTTATTAAAGAACCAATCCAATATTCCGTTGGAAAAGGTCATAAATCTCGGAAATGCCCTCAAGAACAAATTCAATTCGTTTCAAAACGCAGTGATTTGAAGGAAACGAAGAAGAAGAAGAAGAAGAAAACAGAGAGATCGATTTCATTTCTGGTTTGA

Protein sequence

MTDIKNQNQLPFSTTWIWNQNYLLHLFGRSVSFFDIVERDSFFVVWFNKSTICMDDAREAIRLERKKRKEIIIKVSLGKLILFIKEPIQYSVGKGHKSRKCPQEQIQFVSKRSDLKETKKKKKKKTERSISFLV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G015340.1Lsi10G015340.1mRNA