Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCGGGATTCATCGCCGCCTCCGTTGCCGCTGCATCCGCCGCCGCCATCTCCGCCTCCCCTTCTTCCTCTACTCTTATCTGCAACCCAAAAGTTCAATTCCCTCGCCAGGTAAGCCTTGAATCAACGATTCATCAATTTCCCTCTTCCAAAAATTCCTCCTTTAACAATTTCAAGTTTCAATTTATTGTTTGAAACTGTAAATTTCTTTGTCTTTTTCGCTATTTTTGAGATTTGGGAAATTTAATTATGCAGGAAGGAAAGGAAGGAGAGAACTCTTCGTCTTCAACGGATAAATTTGCTCCCAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCACAGATAAAATTCGCCGGCGCCGGCGACGGCGACGGGCGTGGCTGCATTTGACGGTGGAGTGGACCCACCGCGGCCGCAACTTTGTATGTTGCTTTATTATTATTATTTTTTCTTTTTTGGTTTGTTATTTTTCTTGTCGAAAGAAATGATAGATAACAGAGAAAAGTGTCGAAAGTCTCTCATTCTGCACATTAAAAAAAATAAGAATTTTAGTTTATACTTTTTTTTTAAATTTTTTTTTTTTTATATTCATGAGCGTTCGGGCCAACTCTTAATACACTTAGACTAATTTTAAGATAATCTATTTGACTCTATAATACACTTAGACTAATTTTAAGATAATCTATTTGACTCTATAATATCTAGGTGTAAGAGAGAAATAGTAGGATATTTTTTAATTATTTTAATGAAAATTACCAAAAGATGCAATGAAGAAAACGTGTATTGGTTTGGTTTTGGGGTTGGGGAATAATTGTGTTCAAAAAACAACTTTTGCAGAAAGGAAAAAGAGAAAGAGTGACGTGTACATAATAATAATAATATAAAGAAAAAGAAGACTTTTGAATAGGCAAAAGGAAAGATTGTTTTTACAACTGGTTAAATTATAAAAGTACTGGTTTGAATTATACTTTTGAGTTTTAAAATGTTTTGTTTTAATTTTTGAAGTTTGAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTGACACCTACCCTTTACATCGGTCTTTGAGGTCAGAGATTCAAATTATCATATCCGAATATGAATTTTAGTAGAGTTGGCATAAGAGGTGGATTTGATGTTGGTGCTGGTGGAGTTATAGGTTTAGGAAGCTTGTATTGTTTAAGTTTGTTTGGTTTCTCCAATGAAAAAGGAGTTAGACAACTCATCCCTTCAAATGTAAGTCCAACCCACCCCTCCAAACACCACATGTAGTAAATTATTGTATGATCAAATGACAAACTACAAGGCTAATGTTTTGATATTATCCTAAAAGTATAATGAAAAGATTTAAATCAAGCTGCGTGAGAAGCCGTATGTTAGCATAATTCTACCAATAAAAGCATTGAAAATTTTCACCTCAGGCGTTTCGAGGAACATCATTCTCGATTAGCAAAAACTGCTTGCATGTCTTACTTTACGGGTGATGGACCGCCCCATCCGAATACGTCGAGTGGTGAGAGCTTCTAACAGTACTTCCAGAGCATCTTCCAATGCTTCGCCCTGTTTTTCCAATTCGACCGAACTGAACTTTGGAACGAGTTGAAGCTCAAAGAGCAGGCTAGCTGCTGCTGCTGCAGTGCAGGTACGGTCCCATGATGGTTGAGGCCTTCACATTCAGACAAGCAGCTCTTAAGAGTCAATGTCCTATAAAAAGATCATGCGAGAAAACCCGAATATATTGGATGACTAGCTCAAATTCTTACCTGAGTTTATGCATTGCAGAGGATCCCGTAGCCAATGATATGCATGGAATGTCCTCTCCCCAAACCGATATAGCTTGCTCCTACATAATTGCATCATCAGAATATAGTTTTAGAGTAGTTTCCAAAAGTTTGGTCCACCTCAGTCTGAATATCAAACATCACACAAAGGAACATAAGCTATCAATGAAGGATCCCAAAAGAACATTATGAAGGTTCAAACCGAATAATGTTTATCTTTTATTGATTTCATGGCCTCCTAAAGGTCCCTGATACTCAGAACAAGGACCTACTGTCTATTTTTTTGATAAAAGAAAATTTCATCGATAAATGAAATATGGGGAAACCCCAAACACATATAGGTGATTACAATAGAGAGCGAACAAGGACCTATTGTCAGGATGTTACTACTACACCATTTCACTGAGAGCCAACAAAGCATATATGGTAGCAGTCCATCAAATAGTGGAAAGAAGCTGTTTGAGGCCCATTTCTGTTGGGTAGTGCCATCTAAAAGTAGGATGCTATACTTTAATTGCTTTCGTGGGCAAAATCTCAAGAAACCAGGATCCTACGGTGGTCCAACTTCATAAGGTCACTCTTCAGGAATCATGGAATAAAGGAAATTTGAGAATCTTTCTTAATATTGCTGACAGATGGGGGAGCTAGATGGCAGGCCTCCTTTTGGAGTACTCAAAATCCTGTTTTGGTTTCACATTTGCTTGGGGTGGATTTTCCTATCCCACTTGTTAAAAAAATGAAACAGTAAAAACTAAGACATAATCCCAAAAGTATTAATTCAAGAATAGCACCCAATTATGCAGGATTAAATATTCAGGCATATTGTTATGGGCAAAACTTTGGCTTTCTCCAGTAATAACCCAGAAGATGCCCACCTAGACGACATAATACGAAAATGCTACATAACGTTACCTTGAGTCGGTTGAACATTGCAGCAGAGTTGCTCCAAGTACCATCAATCAAAACAAAATTCAGAATTCCATCTCCATCAGTCTATGAGTAGAATCAACAAGAACGTTATGACCTTGTTCAACTGGAAGAACACAAAATTTTACAAAAACAGAACCATAGCAAAAAAAACAAAACATCAGCCAGAATACAAAGTACGTTATTTGGAACTGTATGGATTGAATAGCTGAGCCTAGAAGTCTTCCATAAATAATGTTTCATAGGTATATCCAACCATAAATGTCGTAGGTATGTTGAATTTCTTCTACCATGTAGTCTTTACTTTTATCATTACCATTTAATAATATGAAATATGAAGTCAAATTCTAGCTGCACAGTGAGTAGTATAATCAAGAACGGACATTAACTATACTGCTTCAGAAAATATGTACCATTTGCTGTGGGTTTTCTAGCTTAGTTGACAGTTCAGAGCTGAAGGCCTCCTGAACACCTTTGGAAATTGCATTCTTGTTGGGATAAAGGCAACAAACCTTACTTTTACCTGAGTAATATTTGAAAAAACCACAGTAAACAAAAGAAGAAAATAGAGTTTTACATGGCATACCGTCTTTGCTAATGAGTTACAGTGTGAAAACCACATGGCAGTTTATGGCTGATAGCAACTATCCACATATATTTTGTTAGTATCCAATCCAAACACAGAAAATATACAAAAAAACCAAAGAGAACTATATTGCAATTTCAGTGAAGAAATTACAATATAAACAAGTAATTCGAGATACTTGGACCCTCTCGTATTGAAATCTCTCTCAATTACCAAATGTCTAACACCCTCCTTCCCCACTTCCTTTATTTATAACTAAACTCCATAACCACCTCCCTAACTACTCACTCATATACCCTTAATATCCTAATAGCATTCCTAACATATTACTAGATTCAGAGGAATGCCATAAATCTCTTAAAGAAATACTTAATTTCTTAGACCTAGAATAAGATATTACATTAGTTCTTGCTACAGTAATATAAAGCTATAANAATATACAAAAAAACCAAAGAGAACTATATTGCAATTTCAGTGAAGAAATTACAATATAAACAAGTAATTCGAGATACTTGGACCCTCTCGTATTGAAATCTCTCTCAATTACCAAATGTCTAACACCTCCTTCCCCACTTCCTTTATTTATAACTAAACTCCATAACCACCTCCCTAACTACTCACTCATATACCCTTAATATCCTAATAGCATTCCTAACATATTACTAGATTCAGAGGAATGCCATAAATCTCTTAAAGAAATACTTAATTTCTTAGACCTAGAATAAGATATTACATTAGTTCTTGCTACAGTAATATAAAGCTATAGACTTGTTAAAGCTTACACGAGGAATACAGTTACCTGCTGACTTGAATGCATTCCACATGATTTCTTCATGTTCTGAGATACCATAGAGGCACAAAGTTGTGGATTCTACACCAAAGACTTGCAACAACAACTTCCCTGTGTTGTTCTGCCGCAGAAAATCCTGAACAAAAACTCTAGATAAACTTTATGTCAAGTTTAGTAGATGAGAAGGATCAAGAATTGACCAGCAGTAGACACACCTTTGGATGCATATATAGCCAAAACCGTGCTCCATGCCATAGAGAACAATGCTTGACTCTTGAACACATACAATCCTCAAAAGGCAGCCAGCACTAAGCAGACACAAAAGAATTCAAAAAAGGCAGATAAGTTACATAAAGTAATAATAAAGGTCTGTAGATACTAAACAGCCTATCAGTAATGCAATAGAAAAACCTATTCAACAAATTGGTGGTGTTAATATGAATAGAACTCCAAGAAATACATAATCATTTAAGATTGATTATACCTTCTGACAAAGATAATCTCGGCTCCCAAGCAGACGACATGCTATTTGTCGAGCAGAAAAGAATTGAAGTTTCTGCTCAGAACTACCTAGAGCCTGATAGGTAGCTCGGTGTTTTTTGTCCTCCTGAGTTTTAAAATATCCCTGAAAAAAGGCCAAAGATTAACAATGCAATTTTTTTCACAATGAATAGATTAAATACGTAGGATGGAGGAATTGAACTTGGCAATGCAATCTTTTTCACAATGAGTAAAAATAAGAAGGGACATATATAGCACTACAGCCTCATGGTTCGTGGAATGGATATCTAAAATTTATTCGTTTTCACATGTGTAATAACCAAAAAAGATACTGCAGGAATAGTTCTGCCATTTGAGAAGCAAGGAGAATTACCATGTAGTTTTGTGTTTATTACATGTGTAAGGATTCCGATTTGAGTCCAAAATGTAACTTTTTTTTTTTGTCTTTTTTGACAAGGAACGGAGAACTTCATTAAAAAACTGGAGCCAAACAAAACAACCTAGGGGACAAATGGACAACGCATCCCACTTTCCCAAGAAAAGGATTACAAAAAGACCTTCCAACCTATAATGATGGAGTATGTGGAGTAATTACAAAAAA
mRNA sequence
AAATCGGGATTCATCGCCGCCTCCGTTGCCGCTGCATCCGCCGCCGCCATCTCCGCCTCCCCTTCTTCCTCTACTCTTATCTGCAACCCAAAAGTTCAATTCCCTCGCCAGGTAAGCCTTGAATCAACGATTCATCAATTTCCCTCTTCCAAAAATTCCTCCTTTAACAATTTCAAGTTTCAATTTATTGAAGGAAAGGAAGGAGAGAACTCTTCGTCTTCAACGGATAAATTTGCTCCCAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCACAGATAAAATTCGCCGGCGCCGGCGACGGCGACGGGCGTGGCTGCATTTGACGGTGGAGTGGACCCACCGCGGCCGCAACTTTGAACGGAGAACTTCATTAAAAAACTGGAGCCAAACAAAACAACCTAGGGGACAAATGGACAACGCATCCCACTTTCCCAAGAAAAGGATTACAAAAAGACCTTCCAACCTATAATGATGGAGTATGTGGAGTAATTACAAAAAA
Coding sequence (CDS)
AAATCGGGATTCATCGCCGCCTCCGTTGCCGCTGCATCCGCCGCCGCCATCTCCGCCTCCCCTTCTTCCTCTACTCTTATCTGCAACCCAAAAGTTCAATTCCCTCGCCAGGTAAGCCTTGAATCAACGATTCATCAATTTCCCTCTTCCAAAAATTCCTCCTTTAACAATTTCAAGTTTCAATTTATTGAAGGAAAGGAAGGAGAGAACTCTTCGTCTTCAACGGATAAATTTGCTCCCAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCACAGATAA
Protein sequence
KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKFQFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR
Homology
BLAST of Lsi10G008950 vs. ExPASy TrEMBL
Match:
A0A6J1CHM8 (uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011258 PE=4 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16
Identity = 61/96 (63.54%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KS FIAASVA AS AA+SASPSSST +CNPKVQFPRQ
Sbjct: 3 KSAFIAASVAGAS-AAVSASPSSSTFVCNPKVQFPRQ----------------------- 62
Query: 61 QFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
EGK ENSSSS DKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ---EGKVEENSSSSADKFAPKFDGLRFIETLVTAHR 71
BLAST of Lsi10G008950 vs. ExPASy TrEMBL
Match:
A0A6J1I1D6 (uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 8.3e-16
Identity = 61/97 (62.89%), Postives = 65/97 (67.01%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGFIAAS+AAAS AA+SASPSSSTL C+PK+Q PRQ
Sbjct: 3 KSGFIAASIAAAS-AAVSASPSSSTLFCDPKIQLPRQ----------------------- 62
Query: 61 QFIEGKE-GENSSSSTDKFAPKFDGLRFIETLVTAHR 97
E KE GENSSSS DKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ---EEKELGENSSSSADKFAPKFDGLRFIETLVTAHR 72
BLAST of Lsi10G008950 vs. ExPASy TrEMBL
Match:
E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 53/100 (53.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGF AASVAAASA AISA PSSS +CN K+Q R
Sbjct: 3 KSGFFAASVAAASATAISA-PSSSGFLCNSKIQLSRD----------------------- 62
Query: 61 QFIEGKEGENS----SSSTDKFAPKFDGLRFIETLVTAHR 97
+ + GK+ ENS SSS D+FAP+FDGLRFIETLVTAHR
Sbjct: 63 EAVAGKDIENSESQRSSSADRFAPRFDGLRFIETLVTAHR 78
BLAST of Lsi10G008950 vs. ExPASy TrEMBL
Match:
A0A059DGL2 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A01816 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09
Identity = 49/96 (51.04%), Postives = 55/96 (57.29%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSG A S AAASA AI++S SS C K+QFP Q + ST Q SS+N
Sbjct: 53 KSGLFAVSAAAASATAIASSSSSLNFSCTSKLQFPNQEHVSST-EQAASSQN-------- 112
Query: 61 QFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
S S DKFAP+FDGLRFIETLVTAHR
Sbjct: 113 -----------SGSADKFAPRFDGLRFIETLVTAHR 128
BLAST of Lsi10G008950 vs. ExPASy TrEMBL
Match:
A0A2C9US41 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G147000 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 5.7e-09
Identity = 49/96 (51.04%), Postives = 58/96 (60.42%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGF AASVAAASA AISASPSSST S S +H P +S+
Sbjct: 46 KSGFFAASVAAASATAISASPSSST----------SSFSCNSNMHLSPEEASSN------ 105
Query: 61 QFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
+ + ++ST+KFAP+FDGLRFIETLVTAHR
Sbjct: 106 ------KDQQRTASTNKFAPRFDGLRFIETLVTAHR 119
BLAST of Lsi10G008950 vs. NCBI nr
Match:
XP_038902353.1 (uncharacterized protein LOC120088987 [Benincasa hispida])
HSP 1 Score: 105.5 bits (262), Expect = 2.5e-19
Identity = 65/96 (67.71%), Postives = 67/96 (69.79%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGFIAASVA AAA+SASPSSSTL+CNPKVQFPRQ
Sbjct: 3 KSGFIAASVA---AAAVSASPSSSTLVCNPKVQFPRQ----------------------- 62
Query: 61 QFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
EGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ---EGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 69
BLAST of Lsi10G008950 vs. NCBI nr
Match:
XP_004139940.2 (cell wall integrity and stress response component 1 [Cucumis sativus])
HSP 1 Score: 100.9 bits (250), Expect = 6.3e-18
Identity = 63/96 (65.62%), Postives = 67/96 (69.79%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGFIAASVAAASA+A ASPSSSTL+CNPKV FPRQ E SS +SS
Sbjct: 3 KSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSS------ 62
Query: 61 QFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
+SSSSTDKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ------SSSSSSSSTDKFAPKFDGLRFIETLVTAHR 86
BLAST of Lsi10G008950 vs. NCBI nr
Match:
XP_022140652.1 (uncharacterized protein LOC111011258 [Momordica charantia])
HSP 1 Score: 95.5 bits (236), Expect = 2.6e-16
Identity = 61/96 (63.54%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KS FIAASVA AS AA+SASPSSST +CNPKVQFPRQ
Sbjct: 3 KSAFIAASVAGAS-AAVSASPSSSTFVCNPKVQFPRQ----------------------- 62
Query: 61 QFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
EGK ENSSSS DKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ---EGKVEENSSSSADKFAPKFDGLRFIETLVTAHR 71
BLAST of Lsi10G008950 vs. NCBI nr
Match:
KAG6604795.1 (hypothetical protein SDJN03_02112, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 94.0 bits (232), Expect = 7.7e-16
Identity = 62/97 (63.92%), Postives = 65/97 (67.01%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGFIAASV AA AAA+SASPSSSTL C+PK+QFPRQ
Sbjct: 3 KSGFIAASVTAA-AAAVSASPSSSTLFCDPKIQFPRQ----------------------- 62
Query: 61 QFIEGKE-GENSSSSTDKFAPKFDGLRFIETLVTAHR 97
E KE GENSSSS DKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ---EEKELGENSSSSADKFAPKFDGLRFIETLVTAHR 72
BLAST of Lsi10G008950 vs. NCBI nr
Match:
XP_022970726.1 (uncharacterized protein LOC111469626 [Cucurbita maxima])
HSP 1 Score: 92.8 bits (229), Expect = 1.7e-15
Identity = 61/97 (62.89%), Postives = 65/97 (67.01%), Query Frame = 0
Query: 1 KSGFIAASVAAASAAAISASPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNFKF 60
KSGFIAAS+AAAS AA+SASPSSSTL C+PK+Q PRQ
Sbjct: 3 KSGFIAASIAAAS-AAVSASPSSSTLFCDPKIQLPRQ----------------------- 62
Query: 61 QFIEGKE-GENSSSSTDKFAPKFDGLRFIETLVTAHR 97
E KE GENSSSS DKFAPKFDGLRFIETLVTAHR
Sbjct: 63 ---EEKELGENSSSSADKFAPKFDGLRFIETLVTAHR 72
BLAST of Lsi10G008950 vs. TAIR 10
Match:
AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 0
Query: 1 KSGFIAASVA-AASAAAISA-SPSSSTLICNPKVQFPRQVSLESTIHQFPSSKNSSFNNF 60
K+G IAAS++ AASA AISA S ++S +P+ RQ + E
Sbjct: 3 KTGIIAASISVAASATAISAGSTNTSVSFSSPESNLSRQEAKEKQ--------------- 62
Query: 61 KFQFIEGKEGENSSSSTDKFAPKFDGLRFIETLVTAHR 97
K+G + +KFAP+FDGLRFIETLVTAHR
Sbjct: 63 -----RKKKGSSEDGGDEKFAPRFDGLRFIETLVTAHR 80
BLAST of Lsi10G008950 vs. TAIR 10
Match:
AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 0
Query: 72 SSSTDKFAPKFDGLRFIETLVTAHR 97
++ +D F P+FDGLRFIETLVTAHR
Sbjct: 38 TNGSDNFEPRFDGLRFIETLVTAHR 62
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CHM8 | 1.3e-16 | 63.54 | uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A6J1I1D6 | 8.3e-16 | 62.89 | uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626... | [more] |
E0CTD2 | 1.4e-10 | 53.00 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=... | [more] |
A0A059DGL2 | 2.0e-09 | 51.04 | Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A01816 PE=4 SV... | [more] |
A0A2C9US41 | 5.7e-09 | 51.04 | Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G147000 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |
XP_038902353.1 | 2.5e-19 | 67.71 | uncharacterized protein LOC120088987 [Benincasa hispida] | [more] |
XP_004139940.2 | 6.3e-18 | 65.63 | cell wall integrity and stress response component 1 [Cucumis sativus] | [more] |
XP_022140652.1 | 2.6e-16 | 63.54 | uncharacterized protein LOC111011258 [Momordica charantia] | [more] |
KAG6604795.1 | 7.7e-16 | 63.92 | hypothetical protein SDJN03_02112, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022970726.1 | 1.7e-15 | 62.89 | uncharacterized protein LOC111469626 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT4G28290.1 | 3.1e-07 | 41.84 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT5G42110.1 | 1.1e-04 | 72.00 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |