Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGCCAAGAAATGCAGAGCCACACAAACAACAACCAAACACTGCCCCAAAAACAAGGAGTAATCATCACTGTCTACATTGAATCTCCAAAATTACAAAACAATAATTCCCATAAAACCCCCAATATTCCCCACAACAACATCAATTCAAACGCTGCCCCTTCCAAAGGCTACGATCGTCGGGCTCAGCTTCTCGCCTACTCTCGCCACCTCAGAAATGTCGATTCCTCTCTCTCTCAATCCCCCAAACCCAAATCCAAGTCAACATTTTCCCGCAAATGGAAGCTCCGATCGGAGGCGCCGGGGGTGCGGTGGAGATATGAACGTGTTGGAATGATGAGAGAAGAGAGAACAGAGGTGGTGGATCAGCCATGCCGGCCCAAGTGCTTTGGTCGAAAAACCAACAAGAAAATCACTGGCAAATCGGGTTCTTCCATATTTGTAAGATTCTAATTGCATTGAATATGAATACCCATTTGATCCTTTTTAATTATATTATATTCCCTTTATGATTTGTTATAAGTATGGTGATTAATGTGTGTTTGAGTTTTCAGAGGAAATTGAAGAGTTTGTTGGGAGAGTTATCAAAGGGCTGCAAACGCAAAGAGTGA
mRNA sequence
ATGCAAAGCCAAGAAATGCAGAGCCACACAAACAACAACCAAACACTGCCCCAAAAACAAGGAGTAATCATCACTGTCTACATTGAATCTCCAAAATTACAAAACAATAATTCCCATAAAACCCCCAATATTCCCCACAACAACATCAATTCAAACGCTGCCCCTTCCAAAGGCTACGATCGTCGGGCTCAGCTTCTCGCCTACTCTCGCCACCTCAGAAATGTCGATTCCTCTCTCTCTCAATCCCCCAAACCCAAATCCAAGTCAACATTTTCCCGCAAATGGAAGCTCCGATCGGAGGCGCCGGGGGTGCGGTGGAGATATGAACGTGTTGGAATGATGAGAGAAGAGAGAACAGAGGTGGTGGATCAGCCATGCCGGCCCAAGTGCTTTGGTCGAAAAACCAACAAGAAAATCACTGGCAAATCGGGTTCTTCCATATTTAGGAAATTGAAGAGTTTGTTGGGAGAGTTATCAAAGGGCTGCAAACGCAAAGAGTGA
Coding sequence (CDS)
ATGCAAAGCCAAGAAATGCAGAGCCACACAAACAACAACCAAACACTGCCCCAAAAACAAGGAGTAATCATCACTGTCTACATTGAATCTCCAAAATTACAAAACAATAATTCCCATAAAACCCCCAATATTCCCCACAACAACATCAATTCAAACGCTGCCCCTTCCAAAGGCTACGATCGTCGGGCTCAGCTTCTCGCCTACTCTCGCCACCTCAGAAATGTCGATTCCTCTCTCTCTCAATCCCCCAAACCCAAATCCAAGTCAACATTTTCCCGCAAATGGAAGCTCCGATCGGAGGCGCCGGGGGTGCGGTGGAGATATGAACGTGTTGGAATGATGAGAGAAGAGAGAACAGAGGTGGTGGATCAGCCATGCCGGCCCAAGTGCTTTGGTCGAAAAACCAACAAGAAAATCACTGGCAAATCGGGTTCTTCCATATTTAGGAAATTGAAGAGTTTGTTGGGAGAGTTATCAAAGGGCTGCAAACGCAAAGAGTGA
Protein sequence
MQSQEMQSHTNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINSNAAPSKGYDRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGVRWRYERVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGCKRKE
Homology
BLAST of Lsi09G009830 vs. ExPASy TrEMBL
Match:
A0A0A0KN34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1)
HSP 1 Score: 239.6 bits (610), Expect = 9.5e-60
Identity = 134/182 (73.63%), Postives = 144/182 (79.12%), Query Frame = 0
Query: 1 MQSQEMQSHTNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPH-NNINSNAAP---- 60
MQS+EMQSHTNN QTLP+KQ VIITVY+ESPKLQN+N HKTP +PH NN NSN P
Sbjct: 1 MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 60
Query: 61 ---SKGYDRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGV-------- 120
S GYDRRAQLLAYSRHLRNV SS +QSPKPKSK KWK+RSEAP V
Sbjct: 61 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKKW---KWKVRSEAPTVRRMPSRRA 120
Query: 121 --RWRYERVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGC 165
RWRYERVGMMREERTEVVDQPCRPKC G ++NKK T +SGSSIFRKLKSLLGELSKGC
Sbjct: 121 LQRWRYERVGMMREERTEVVDQPCRPKCLGGRSNKKSTSRSGSSIFRKLKSLLGELSKGC 179
BLAST of Lsi09G009830 vs. ExPASy TrEMBL
Match:
A0A1S3CDS3 (uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=4 SV=1)
HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58
Identity = 133/182 (73.08%), Postives = 143/182 (78.57%), Query Frame = 0
Query: 1 MQSQEMQSHTNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINS-NAAP---- 60
MQS+EMQSHTNN QTLP+KQ VIITVY+ESPKLQN+NSHKT IPHNN N N P
Sbjct: 38 MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNSHKTQIIPHNNNNHINPKPSLPK 97
Query: 61 ---SKGYDRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGV-------- 120
S GYDRRAQLLAYSRHLRNV SS +QSP+PKSK KWK+RSEAP V
Sbjct: 98 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPQPKSKKW---KWKVRSEAPTVRRMPSRRA 157
Query: 121 --RWRYERVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGC 165
RWRYERVGMMREERTEVVDQPCRPKC G ++NKK T +SGSSIFRKLKSLLGELSKGC
Sbjct: 158 LQRWRYERVGMMREERTEVVDQPCRPKCLGGRSNKKSTSRSGSSIFRKLKSLLGELSKGC 216
BLAST of Lsi09G009830 vs. ExPASy TrEMBL
Match:
A0A6J1JSH9 (uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148 PE=4 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 3.6e-35
Identity = 95/175 (54.29%), Postives = 118/175 (67.43%), Query Frame = 0
Query: 6 MQSHTNNNQ--TLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINSNAAP----SKGY 65
M+ TN N+ +P K+ VIITVY+ESP+ Q+N SH+ P + N + NA P S+GY
Sbjct: 1 MEDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAPPKATKSRGY 60
Query: 66 DRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGVR----------WRYE 125
DRRA+LLAYSR LRNVDS+ + PK KS KW+++SE VR RYE
Sbjct: 61 DRRAELLAYSRELRNVDSATTHLPKTKS------KWRVKSETAAVRRIPSRRGLRQGRYE 120
Query: 126 RVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGCKR 165
RVGMMREERTEVV+Q C PKCF +K+ +G+ GSSI RKLKSL+G LSKGCKR
Sbjct: 121 RVGMMREERTEVVEQRCLPKCF-NGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
BLAST of Lsi09G009830 vs. ExPASy TrEMBL
Match:
A0A6J1HCQ4 (uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC111462789 PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 5.2e-34
Identity = 94/175 (53.71%), Postives = 116/175 (66.29%), Query Frame = 0
Query: 6 MQSHTNNNQ--TLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINSNAAP----SKGY 65
M+ TN N+ +P K+ VIITVY+ESP+ Q+N SH+ P + N + NA P S+GY
Sbjct: 1 MEDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGY 60
Query: 66 DRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGVR----------WRYE 125
DRRA+LLAYSR LRNVDS+ + PK KS KW+++SE VR RYE
Sbjct: 61 DRRAELLAYSRELRNVDSATTHLPKTKS------KWRVKSETAAVRRLPSRRGLRQGRYE 120
Query: 126 RVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGCKR 165
RVGMMREERTEVV+Q C PKCF K+ +G+ GSSI RKLKSL+G LS GCKR
Sbjct: 121 RVGMMREERTEVVEQRCLPKCF-NGDYKRSSGRLGSSILRKLKSLMGGLSMGCKR 168
BLAST of Lsi09G009830 vs. ExPASy TrEMBL
Match:
A0A6J1CJQ0 (uncharacterized protein LOC111011926 OS=Momordica charantia OX=3673 GN=LOC111011926 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 3.7e-32
Identity = 94/166 (56.63%), Postives = 115/166 (69.28%), Query Frame = 0
Query: 2 QSQEMQSH-TNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINSNAAPSKGYD 61
Q+Q+M+ H ++ N+T P+K GVIITVY+ESPK +NNSH+ + N + + +GYD
Sbjct: 49 QNQKMEGHKSDTNKTNPRKDGVIITVYVESPK-SHNNSHQNRDANALNKINPKSRGRGYD 108
Query: 62 RRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGVRWRYERVGMMREERTE 121
RRAQLLAYSR LRN+DS L KPK KWKL+ + RYERVGM RE+R E
Sbjct: 109 RRAQLLAYSRDLRNLDSPL----KPK-------KWKLKVRS---ETRYERVGMGREDRAE 168
Query: 122 VVDQPCRPKCF-GRKTNKKITGKSGSSIFRKLKSLLGELSKGCKRK 166
VVDQ CRPKCF + KK TGKSGSSI K+KSLL ELSKGCKR+
Sbjct: 169 VVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRR 199
BLAST of Lsi09G009830 vs. NCBI nr
Match:
XP_004140323.1 (uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical protein Csa_008362 [Cucumis sativus])
HSP 1 Score: 239.6 bits (610), Expect = 2.0e-59
Identity = 134/182 (73.63%), Postives = 144/182 (79.12%), Query Frame = 0
Query: 1 MQSQEMQSHTNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPH-NNINSNAAP---- 60
MQS+EMQSHTNN QTLP+KQ VIITVY+ESPKLQN+N HKTP +PH NN NSN P
Sbjct: 1 MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 60
Query: 61 ---SKGYDRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGV-------- 120
S GYDRRAQLLAYSRHLRNV SS +QSPKPKSK KWK+RSEAP V
Sbjct: 61 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKKW---KWKVRSEAPTVRRMPSRRA 120
Query: 121 --RWRYERVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGC 165
RWRYERVGMMREERTEVVDQPCRPKC G ++NKK T +SGSSIFRKLKSLLGELSKGC
Sbjct: 121 LQRWRYERVGMMREERTEVVDQPCRPKCLGGRSNKKSTSRSGSSIFRKLKSLLGELSKGC 179
BLAST of Lsi09G009830 vs. NCBI nr
Match:
XP_038874461.1 (uncharacterized protein LOC120067113 [Benincasa hispida])
HSP 1 Score: 236.9 bits (603), Expect = 1.3e-58
Identity = 132/180 (73.33%), Postives = 145/180 (80.56%), Query Frame = 0
Query: 1 MQSQEMQSHTNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNIN--SNAAP--- 60
M SQ+MQ+HTNNNQT+PQKQGVIITVY+ESPKLQ+NNSHK P IPHNNIN ++A P
Sbjct: 52 MPSQKMQTHTNNNQTIPQKQGVIITVYVESPKLQDNNSHKPPIIPHNNINNPNSALPKTP 111
Query: 61 -SKGYDRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGV---------- 120
S GYDRRAQLLAYSRHLRN +SSLSQS K +SK KW++RSEAP V
Sbjct: 112 NSTGYDRRAQLLAYSRHLRNQNSSLSQSSKTESKKW---KWRVRSEAPAVRRMPSRRALQ 171
Query: 121 RWRYERVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGCKR 165
RWRYERVGMMREE TEVVDQPCRPKCFG K++KK T KSGSSIFRKLKSLLGELS GCKR
Sbjct: 172 RWRYERVGMMREETTEVVDQPCRPKCFGGKSSKKSTVKSGSSIFRKLKSLLGELSNGCKR 228
BLAST of Lsi09G009830 vs. NCBI nr
Match:
XP_008460454.1 (PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo])
HSP 1 Score: 235.3 bits (599), Expect = 3.7e-58
Identity = 133/182 (73.08%), Postives = 143/182 (78.57%), Query Frame = 0
Query: 1 MQSQEMQSHTNNNQTLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINS-NAAP---- 60
MQS+EMQSHTNN QTLP+KQ VIITVY+ESPKLQN+NSHKT IPHNN N N P
Sbjct: 38 MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNSHKTQIIPHNNNNHINPKPSLPK 97
Query: 61 ---SKGYDRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGV-------- 120
S GYDRRAQLLAYSRHLRNV SS +QSP+PKSK KWK+RSEAP V
Sbjct: 98 TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPQPKSKKW---KWKVRSEAPTVRRMPSRRA 157
Query: 121 --RWRYERVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGC 165
RWRYERVGMMREERTEVVDQPCRPKC G ++NKK T +SGSSIFRKLKSLLGELSKGC
Sbjct: 158 LQRWRYERVGMMREERTEVVDQPCRPKCLGGRSNKKSTSRSGSSIFRKLKSLLGELSKGC 216
BLAST of Lsi09G009830 vs. NCBI nr
Match:
XP_022990178.1 (uncharacterized protein LOC111487148 [Cucurbita maxima])
HSP 1 Score: 157.9 bits (398), Expect = 7.5e-35
Identity = 95/175 (54.29%), Postives = 118/175 (67.43%), Query Frame = 0
Query: 6 MQSHTNNNQ--TLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINSNAAP----SKGY 65
M+ TN N+ +P K+ VIITVY+ESP+ Q+N SH+ P + N + NA P S+GY
Sbjct: 1 MEDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAPPKATKSRGY 60
Query: 66 DRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGVR----------WRYE 125
DRRA+LLAYSR LRNVDS+ + PK KS KW+++SE VR RYE
Sbjct: 61 DRRAELLAYSRELRNVDSATTHLPKTKS------KWRVKSETAAVRRIPSRRGLRQGRYE 120
Query: 126 RVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGCKR 165
RVGMMREERTEVV+Q C PKCF +K+ +G+ GSSI RKLKSL+G LSKGCKR
Sbjct: 121 RVGMMREERTEVVEQRCLPKCF-NGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
BLAST of Lsi09G009830 vs. NCBI nr
Match:
XP_023546181.1 (uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 154.8 bits (390), Expect = 6.3e-34
Identity = 94/175 (53.71%), Postives = 116/175 (66.29%), Query Frame = 0
Query: 6 MQSHTNNNQ--TLPQKQGVIITVYIESPKLQNNNSHKTPNIPHNNINSNAAP----SKGY 65
M+ TN N+ +P K+ VIITVY+ESP+ Q+N SH+ P + N + NA P S+GY
Sbjct: 1 MEDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGY 60
Query: 66 DRRAQLLAYSRHLRNVDSSLSQSPKPKSKSTFSRKWKLRSEAPGVR----------WRYE 125
DRRA+LLAYSR LRNVDS + PK KS KW+++SE VR RYE
Sbjct: 61 DRRAELLAYSRELRNVDSGTTHLPKTKS------KWRVKSETAAVRRIPSKRGLRQGRYE 120
Query: 126 RVGMMREERTEVVDQPCRPKCFGRKTNKKITGKSGSSIFRKLKSLLGELSKGCKR 165
RVGM REERTEVV+Q C PKCF +K+ +G+ GSSI RKLKSL+G LSKGCKR
Sbjct: 121 RVGMTREERTEVVEQRCLPKCF-NGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KN34 | 9.5e-60 | 73.63 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1 | [more] |
| A0A1S3CDS3 | 1.8e-58 | 73.08 | uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=... | [more] |
| A0A6J1JSH9 | 3.6e-35 | 54.29 | uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148... | [more] |
| A0A6J1HCQ4 | 5.2e-34 | 53.71 | uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC1114627... | [more] |
| A0A6J1CJQ0 | 3.7e-32 | 56.63 | uncharacterized protein LOC111011926 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_004140323.1 | 2.0e-59 | 73.63 | uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical ... | [more] |
| XP_038874461.1 | 1.3e-58 | 73.33 | uncharacterized protein LOC120067113 [Benincasa hispida] | [more] |
| XP_008460454.1 | 3.7e-58 | 73.08 | PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo] | [more] |
| XP_022990178.1 | 7.5e-35 | 54.29 | uncharacterized protein LOC111487148 [Cucurbita maxima] | [more] |
| XP_023546181.1 | 6.3e-34 | 53.71 | uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
