Lsi06G009280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G009280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	serine-threonine kinase receptor-associated protein-like
Location	chr06: 19136397 .. 19137768 (-)
RNA-Seq Expression	Lsi06G009280
Synteny	Lsi06G009280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAGAAATGGAGAAACTGGCGATTGGATTGGTACATTTGAAGGTCACAAAGGCGCAGTTTGGAGTTGTTGCCTGGATACCAATGCTTTATATGCTGCCACTAGTTCTGCTGATTTTTCAGCGTATGTCTTTCTCATTGGTTTTCATGATACGTTTCAAGAACTGTCATATCAATGATTTTTCAGAGTCATAACATTGTATGCAGTATATGATTATATATCGTTTCTCAGAACTGAGAGGAGGAGATCTTAAATGTGTATAGATGGAGGAGTTCAACGTAGATCTGGAATTTTTACTTATAATTCCTTGTTTCAAGTTCTAATTAATTTGATTCCCATGCTTCTGAGTTCTGCTTTACGATCGGTACTTTTCTATATATATTGATATTTATGAGTTTTCGGATTAACTTACGCTCACCTTTACTAATCTCACCATATGCATTTAATATTTTCAATTTCCCGTGTGTTTCCTCTTTATGGTTATTTTTGAAAGGGTTATTTTTGACCATTTTCCCTTCATTTTCCTTCCTGATTTATTATTATAATATTTCATTAAAAAACTAAATGAAAATAAACCCTAGTGGGTCTGTCATCCTCCTCCTTCTCTCCACCCGCTTTCTTATTTGCTCTGTTTTGCCCATCTCCCTTAGTTGTAGCAGTCTCGCAATCGCCACCCCCAATCAATTTTTTTCTTAGTTGTTTAGTTTAAGTTTGTAGTTCTGTTGAGTAGTTTGATTTTGTGAGAGATGGATAAGAAGAGAGTGACTATTCCTCTCGCGTGGCATGTCCCTTCTCGACTGGTTGTGGATCTATTTTATAGCCCTGTTATGCCGGATGGGTTCTTCATCATCAGTGCCAGCAAGGGTACGACTCAAAATAACTTTTTTCCTTATGCATTTTAATCTTGAATTTATGATCCGTGGAAGTTTCTGCTTAGTGTTAATTTTGGTCATTGTCAGTTTATTAGTGTTGAATGATTCTGGATTGTGCTTGTTCAATCTCAGTGCTTTTGACTCTAGCTGATAGCTGTGATAGATGTGGGCATTTCTATTTTTGCCTTAATTGATAAGAGATTCGTTGAAACCCCTGTGTCTTGATTGTTTGCTCAGTTTATTTTTCTGGGTTGCCTCTGAAGTACGCTTTTCTTGCGCCATTCAGATTCCAATCCCATGCTCAGAAGTGGAGAAACTGGCGATTGGATTGGCACATTTGAAGGTCAGATAGGTGCAGTTTGGAGTAGTTGTCTGGATACCAATGCTTTACGTGCTGGTACTGATTCTGGTGACTTTTCAGTGGATGTCTTTCTTCACTGGTTCACAGTTTCCACTATACGTCTGAAGAACTGTCATATCATTAGTTGCAGTATATGA

mRNA sequence

ATGCTCAGAAATGGAGAAACTGGCGATTGGATTGGTACATTTGAAGGTCACAAAGGCGCAGTTTGGAGTTGTTGCCTGGATACCAATGCTTTATATGCTGCCACTAGTTCTGCTGATTTTTCAGCCCCTGTTATGCCGGATGGGTTCTTCATCATCAGTGCCAGCAAGGATTCCAATCCCATGCTCAGAAGTGGAGAAACTGGCGATTGGATTGGCACATTTGAAGGTCAGATAGGTGCAGTTTGGAGTAGTTGTCTGGATACCAATGCTTTACGTGCTGGTACTGATTCTGGTGACTTTTCAGTGGATGTCTTTCTTCACTGGTTCACAGTTTCCACTATACGTCTGAAGAACTGTCATATCATTAGTTGCAGTATATGA

Coding sequence (CDS)

ATGCTCAGAAATGGAGAAACTGGCGATTGGATTGGTACATTTGAAGGTCACAAAGGCGCAGTTTGGAGTTGTTGCCTGGATACCAATGCTTTATATGCTGCCACTAGTTCTGCTGATTTTTCAGCCCCTGTTATGCCGGATGGGTTCTTCATCATCAGTGCCAGCAAGGATTCCAATCCCATGCTCAGAAGTGGAGAAACTGGCGATTGGATTGGCACATTTGAAGGTCAGATAGGTGCAGTTTGGAGTAGTTGTCTGGATACCAATGCTTTACGTGCTGGTACTGATTCTGGTGACTTTTCAGTGGATGTCTTTCTTCACTGGTTCACAGTTTCCACTATACGTCTGAAGAACTGTCATATCATTAGTTGCAGTATATGA

Protein sequence

MLRNGETGDWIGTFEGHKGAVWSCCLDTNALYAATSSADFSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFSVDVFLHWFTVSTIRLKNCHIISCSI

Homology

[Close]

BLAST of Lsi06G009280 vs. ExPASy Swiss-Prot
Match: Q5ZL33 (Serine-threonine kinase receptor-associated protein OS=Gallus gallus OX=9031 GN=STRAP PE=2 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 7.5e-14
Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 44  VMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFSVD 103
           V P G+F+ISA KD  PMLR G+TGDWIGTF G  GAVW + L+ +A +A T + DF+  
Sbjct: 25  VTPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAK 84

Query: 104 VFLHWFTVS---TIRLKNCHII 123
           V   W  VS    I L + HI+
Sbjct: 85  V---WDAVSGDELITLAHKHIV 103

[Close]

BLAST of Lsi06G009280 vs. ExPASy Swiss-Prot
Match: Q5E959 (Serine-threonine kinase receptor-associated protein OS=Bos taurus OX=9913 GN=STRAP PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 44  VMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFSVD 103
           + P G+F+ISA KD  PMLR G+TGDWIGTF G  GAVW + L+ +A +A T + DF+  
Sbjct: 25  ITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAK 84

Query: 104 VFLHWFTVS---TIRLKNCHII 123
           V   W  VS    + L + HI+
Sbjct: 85  V---WDAVSGDELMTLAHKHIV 103

[Close]

BLAST of Lsi06G009280 vs. ExPASy Swiss-Prot
Match: Q9Y3F4 (Serine-threonine kinase receptor-associated protein OS=Homo sapiens OX=9606 GN=STRAP PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 44  VMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFSVD 103
           + P G+F+ISA KD  PMLR G+TGDWIGTF G  GAVW + L+ +A +A T + DF+  
Sbjct: 25  ITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAK 84

Query: 104 VFLHWFTVS---TIRLKNCHII 123
           V   W  VS    + L + HI+
Sbjct: 85  V---WDAVSGDELMTLAHKHIV 103

[Close]

BLAST of Lsi06G009280 vs. ExPASy Swiss-Prot
Match: Q9Z1Z2 (Serine-threonine kinase receptor-associated protein OS=Mus musculus OX=10090 GN=Strap PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 44  VMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFSVD 103
           + P G+F+ISA KD  PMLR G+TGDWIGTF G  GAVW + L+ +A +A T + DF+  
Sbjct: 25  ITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAK 84

Query: 104 VFLHWFTVS---TIRLKNCHII 123
           V   W  VS    + L + HI+
Sbjct: 85  V---WDAVSGDELMTLAHKHIV 103

[Close]

BLAST of Lsi06G009280 vs. ExPASy Swiss-Prot
Match: Q5XIG8 (Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 44  VMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFSVD 103
           + P G+F+ISA KD  PMLR G+TGDWIGTF G  GAVW + L+ +A +A T + DF+  
Sbjct: 25  ITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAK 84

Query: 104 VFLHWFTVS---TIRLKNCHII 123
           V   W  VS    + L + HI+
Sbjct: 85  V---WDAVSGDELMTLAHKHIV 103

[Close]

BLAST of Lsi06G009280 vs. ExPASy TrEMBL
Match: A0A6J1CV33 (serine-threonine kinase receptor-associated protein-like OS=Momordica charantia OX=3673 GN=LOC111014534 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S D
Sbjct: 23  FYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSAD 82

Query: 100 FSVDVF 106
           FS  V+
Sbjct: 83  FSAKVW 88

[Close]

BLAST of Lsi06G009280 vs. ExPASy TrEMBL
Match: A0A1S3CPC1 (serine-threonine kinase receptor-associated protein-like OS=Cucumis melo OX=3656 GN=LOC103502721 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S D
Sbjct: 23  FYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSAD 82

Query: 100 FSVDVF 106
           FS  V+
Sbjct: 83  FSAKVW 88

[Close]

BLAST of Lsi06G009280 vs. ExPASy TrEMBL
Match: A0A6J1JHS7 (serine-threonine kinase receptor-associated protein-like OS=Cucurbita maxima OX=3661 GN=LOC111485220 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 42  APVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFS 101
           +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S DFS
Sbjct: 25  SPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSADFS 84

Query: 102 VDVF 106
             V+
Sbjct: 85  AKVW 88

[Close]

BLAST of Lsi06G009280 vs. ExPASy TrEMBL
Match: A0A6J1L3Z5 (serine-threonine kinase receptor-associated protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500297 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 42  APVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFS 101
           +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S DFS
Sbjct: 25  SPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSADFS 84

Query: 102 VDVF 106
             V+
Sbjct: 85  AKVW 88

[Close]

BLAST of Lsi06G009280 vs. ExPASy TrEMBL
Match: A0A6J1L8P1 (serine-threonine kinase receptor-associated protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111500297 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 42  APVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFS 101
           +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S DFS
Sbjct: 25  SPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSADFS 84

Query: 102 VDVF 106
             V+
Sbjct: 85  AKVW 88

[Close]

BLAST of Lsi06G009280 vs. NCBI nr
Match: XP_031743497.1 (serine-threonine kinase receptor-associated protein [Cucumis sativus] >KAE8653149.1 hypothetical protein Csa_019957 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-21
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S D
Sbjct: 23  FYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSAD 82

Query: 100 FSVDVF 106
           FS  V+
Sbjct: 83  FSAKVW 88

[Close]

BLAST of Lsi06G009280 vs. NCBI nr
Match: XP_008464982.1 (PREDICTED: serine-threonine kinase receptor-associated protein-like [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-21
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S D
Sbjct: 23  FYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSAD 82

Query: 100 FSVDVF 106
           FS  V+
Sbjct: 83  FSAKVW 88

[Close]

BLAST of Lsi06G009280 vs. NCBI nr
Match: XP_022145006.1 (serine-threonine kinase receptor-associated protein-like [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-21
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S D
Sbjct: 23  FYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSAD 82

Query: 100 FSVDVF 106
           FS  V+
Sbjct: 83  FSAKVW 88

[Close]

BLAST of Lsi06G009280 vs. NCBI nr
Match: XP_022933377.1 (serine-threonine kinase receptor-associated protein-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 8.0e-21
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 42  APVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFS 101
           +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S DFS
Sbjct: 25  SPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSADFS 84

Query: 102 VDVF 106
             V+
Sbjct: 85  AKVW 88

[Close]

BLAST of Lsi06G009280 vs. NCBI nr
Match: XP_022933376.1 (serine-threonine kinase receptor-associated protein-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 8.0e-21
Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 42  APVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFS 101
           +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS CLDTNALRA T S DFS
Sbjct: 25  SPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATGSADFS 84

Query: 102 VDVF 106
             V+
Sbjct: 85  AKVW 88

[Close]

BLAST of Lsi06G009280 vs. TAIR 10
Match: AT1G52730.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +P+ PDGFF+ISASKDS+PMLR+GETGDWIGTFEG  GAVWSSCLD NALRA + S D
Sbjct: 23  FYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASAD 82

Query: 100 FSVDVF 106
           FS  ++
Sbjct: 83  FSAKLW 88

[Close]

BLAST of Lsi06G009280 vs. TAIR 10
Match: AT1G52730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +P+ PDGFF+ISASKDS+PMLR+GETGDWIGTFEG  GAVWSSCLD NALRA + S D
Sbjct: 23  FYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASAD 82

Query: 100 FSVDVF 106
           FS  ++
Sbjct: 83  FSAKLW 88

[Close]

BLAST of Lsi06G009280 vs. TAIR 10
Match: AT3G15610.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 40  FSAPVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGD 99
           F +P+ PDGFF+ISASKDS PMLR+GETGDWIGTFEG  GAVWSSCLD NALRA + S D
Sbjct: 23  FYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASAD 82

Query: 100 FSVDVF 106
           FS  ++
Sbjct: 83  FSAKLW 88

[Close]

BLAST of Lsi06G009280 vs. TAIR 10
Match: AT1G15470.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 42  APVMPDGFFIISASKDSNPMLRSGETGDWIGTFEGQIGAVWSSCLDTNALRAGTDSGDFS 101
           +PV PDGFF+ISASKDSNPMLR+GETGDWIGTFEG  GAVWS  LD NA+RA + S DF+
Sbjct: 20  SPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFT 79

Query: 102 VDVF 106
             ++
Sbjct: 80  AKIW 83

The following BLAST results are available for this feature:

BLAST of Lsi06G009280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZL33	7.5e-14	50.00	Serine-threonine kinase receptor-associated protein OS=Gallus gallus OX=9031 GN=...	[more]
Q5E959	2.2e-13	47.56	Serine-threonine kinase receptor-associated protein OS=Bos taurus OX=9913 GN=STR...	[more]
Q9Y3F4	2.2e-13	47.56	Serine-threonine kinase receptor-associated protein OS=Homo sapiens OX=9606 GN=S...	[more]
Q9Z1Z2	2.2e-13	47.56	Serine-threonine kinase receptor-associated protein OS=Mus musculus OX=10090 GN=...	[more]
Q5XIG8	2.2e-13	47.56	Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=1011...	[more]

BLAST of Lsi06G009280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV33	1.7e-21	78.79	serine-threonine kinase receptor-associated protein-like OS=Momordica charantia ...	[more]
A0A1S3CPC1	1.7e-21	78.79	serine-threonine kinase receptor-associated protein-like OS=Cucumis melo OX=3656...	[more]
A0A6J1JHS7	3.9e-21	79.69	serine-threonine kinase receptor-associated protein-like OS=Cucurbita maxima OX=...	[more]
A0A6J1L3Z5	3.9e-21	79.69	serine-threonine kinase receptor-associated protein-like isoform X1 OS=Cucurbita...	[more]
A0A6J1L8P1	3.9e-21	79.69	serine-threonine kinase receptor-associated protein-like isoform X2 OS=Cucurbita...	[more]

BLAST of Lsi06G009280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743497.1	3.6e-21	78.79	serine-threonine kinase receptor-associated protein [Cucumis sativus] >KAE865314...	[more]
XP_008464982.1	3.6e-21	78.79	PREDICTED: serine-threonine kinase receptor-associated protein-like [Cucumis mel...	[more]
XP_022145006.1	3.6e-21	78.79	serine-threonine kinase receptor-associated protein-like [Momordica charantia]	[more]
XP_022933377.1	8.0e-21	79.69	serine-threonine kinase receptor-associated protein-like isoform X2 [Cucurbita m...	[more]
XP_022933376.1	8.0e-21	79.69	serine-threonine kinase receptor-associated protein-like isoform X1 [Cucurbita m...	[more]

BLAST of Lsi06G009280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52730.2	1.4e-23	72.73	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G52730.1	1.4e-23	72.73	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G15610.1	1.8e-23	72.73	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15470.1	1.0e-21	70.31	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 45..106 e-value: 1.1E-8 score: 36.5 coord: 1..44 e-value: 1.1E-8 score: 36.6
None	No IPR available	PANTHER	PTHR19877:SF4	SERINE-THREONINE KINASE RECEPTOR-ASSOCIATED PROTEIN	coord: 1..44
None	No IPR available	PANTHER	PTHR19877	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I	coord: 1..44
None	No IPR available	PANTHER	PTHR19877	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I	coord: 43..104
None	No IPR available	PANTHER	PTHR19877:SF4	SERINE-THREONINE KINASE RECEPTOR-ASSOCIATED PROTEIN	coord: 43..104
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 3..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G009280.1	Lsi06G009280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0032797	SMN complex
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding