Lsi06G006200 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G006200
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr06: 8806717 .. 8807889 (-)
RNA-Seq Expression	Lsi06G006200
Synteny	Lsi06G006200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATCCAGTTACAGCCACCACTGGAATTACTTATGATCGTGAAAGTATTGAGAATTGGTTTTTGACCTCTAAAGCTGCAATCTTTTGCCCTCTCACTAAGCAATCTTTGACCAAAGCTTCCGACTTGACGCCGAATCACACGCTTCGCCGCCTGATCAAGTCTTGGCTGGTCGAGAACGCTGCCCCCGGTGGCGGAGCTGATCAAATTCTAGCTCCTAAACCACTTTTAGACAAAACCCGTCTCCGAAAACTCTTGCGGGATCTTGCTACCGCCTCTGACGACCGCTTTCGTATCGACGTTGTGAAGAAGCTTCAGGCTTTGGCTATTGAGAGTGACACGGCAAGTCGAGGGCGTATGGAGGAAGTCGGTGTGGCGAAGGGGATGGTTTTGTTTGTTATAAGATGTTTTAGGGAAGGGAGAGTTGGTGGGCTTGAAGAAGCTTTGAAGATTCTTAGTCTTCTTTCAAATTATTCAATTTCTGAAACTAGGGCTCTTGATTTTTTTGAATCATTGACTTGGATTTTGGGATTGGAGATGGAAAATCACATAATTATCAAAAGCTATGCCGTTGAAGTGTTGAAGAAAGCAACCGATGTGGCTCCCTCCACCATTCTCAGCCAAATAAAGCTTGAGCTGTTCAAAAACATCACAAATCTCTTGAGAGAAAAGATCTCAAATTCGTCTCTCAAAACAACACTCACAGTTCTAACAAACGTATGCCCTTGGGGACGAAACCGAATCAAGCTCGTTGAAGTCGGGGCGGTTTTCGACCTAATCGCACTTGAGCTCGAGAAGCCGGAGAAGAACATAACTGAGCTCATCTTCAACCTCTTGGCCCACCTATGCTCCACGGCAGACGGGAGAGCGGAGCTCATCCGCCATGCCGGGGGCATCGCGGTGGTTTCGAAGAGAATACTTAGGGTTTCAACTGCAACGACTGACCGAGCGATCCAAATTCTATCATTGATATCAAAGCACTCGGCGAGGAAGGATGTTCTTTTGGAGATGTTGAGGGTTGGGGCAGTGTCAAAGCTTTGCATGATAATGCAATCTAATTGTGAGGGATACTTGAAGGAGAAGGCTAGAGAGATTTTGAGGATGCATTCAAATGTGTGGAGTAATTCTCCATGTATTGGGGTTTATGTGATGACTAGAGATCCTAGATAG

mRNA sequence

ATGAAAGATCCAGTTACAGCCACCACTGGAATTACTTATGATCGTGAAAGTATTGAGAATTGGTTTTTGACCTCTAAAGCTGCAATCTTTTGCCCTCTCACTAAGCAATCTTTGACCAAAGCTTCCGACTTGACGCCGAATCACACGCTTCGCCGCCTGATCAAGTCTTGGCTGGTCGAGAACGCTGCCCCCGGTGGCGGAGCTGATCAAATTCTAGCTCCTAAACCACTTTTAGACAAAACCCGTCTCCGAAAACTCTTGCGGGATCTTGCTACCGCCTCTGACGACCGCTTTCGTATCGACGTTGTGAAGAAGCTTCAGGCTTTGGCTATTGAGAGTGACACGGCAAGTCGAGGGCGTATGGAGGAAGTCGGTGTGGCGAAGGGGATGGTTTTGTTTGTTATAAGATGTTTTAGGGAAGGGAGAGTTGGTGGGCTTGAAGAAGCTTTGAAGATTCTTAGTCTTCTTTCAAATTATTCAATTTCTGAAACTAGGGCTCTTGATTTTTTTGAATCATTGACTTGGATTTTGGGATTGGAGATGGAAAATCACATAATTATCAAAAGCTATGCCGTTGAAGTGTTGAAGAAAGCAACCGATGTGGCTCCCTCCACCATTCTCAGCCAAATAAAGCTTGAGCTGTTCAAAAACATCACAAATCTCTTGAGAGAAAAGATCTCAAATTCGTCTCTCAAAACAACACTCACAGTTCTAACAAACGTATGCCCTTGGGGACGAAACCGAATCAAGCTCGTTGAAGTCGGGGCGGTTTTCGACCTAATCGCACTTGAGCTCGAGAAGCCGGAGAAGAACATAACTGAGCTCATCTTCAACCTCTTGGCCCACCTATGCTCCACGGCAGACGGGAGAGCGGAGCTCATCCGCCATGCCGGGGGCATCGCGGTGGTTTCGAAGAGAATACTTAGGGTTTCAACTGCAACGACTGACCGAGCGATCCAAATTCTATCATTGATATCAAAGCACTCGGCGAGGAAGGATGTTCTTTTGGAGATGTTGAGGGTTGGGGCAGTGTCAAAGCTTTGCATGATAATGCAATCTAATTGTGAGGGATACTTGAAGGAGAAGGCTAGAGAGATTTTGAGGATGCATTCAAATGTGTGGAGTAATTCTCCATGTATTGGGGTTTATGTGATGACTAGAGATCCTAGATAG

Coding sequence (CDS)

ATGAAAGATCCAGTTACAGCCACCACTGGAATTACTTATGATCGTGAAAGTATTGAGAATTGGTTTTTGACCTCTAAAGCTGCAATCTTTTGCCCTCTCACTAAGCAATCTTTGACCAAAGCTTCCGACTTGACGCCGAATCACACGCTTCGCCGCCTGATCAAGTCTTGGCTGGTCGAGAACGCTGCCCCCGGTGGCGGAGCTGATCAAATTCTAGCTCCTAAACCACTTTTAGACAAAACCCGTCTCCGAAAACTCTTGCGGGATCTTGCTACCGCCTCTGACGACCGCTTTCGTATCGACGTTGTGAAGAAGCTTCAGGCTTTGGCTATTGAGAGTGACACGGCAAGTCGAGGGCGTATGGAGGAAGTCGGTGTGGCGAAGGGGATGGTTTTGTTTGTTATAAGATGTTTTAGGGAAGGGAGAGTTGGTGGGCTTGAAGAAGCTTTGAAGATTCTTAGTCTTCTTTCAAATTATTCAATTTCTGAAACTAGGGCTCTTGATTTTTTTGAATCATTGACTTGGATTTTGGGATTGGAGATGGAAAATCACATAATTATCAAAAGCTATGCCGTTGAAGTGTTGAAGAAAGCAACCGATGTGGCTCCCTCCACCATTCTCAGCCAAATAAAGCTTGAGCTGTTCAAAAACATCACAAATCTCTTGAGAGAAAAGATCTCAAATTCGTCTCTCAAAACAACACTCACAGTTCTAACAAACGTATGCCCTTGGGGACGAAACCGAATCAAGCTCGTTGAAGTCGGGGCGGTTTTCGACCTAATCGCACTTGAGCTCGAGAAGCCGGAGAAGAACATAACTGAGCTCATCTTCAACCTCTTGGCCCACCTATGCTCCACGGCAGACGGGAGAGCGGAGCTCATCCGCCATGCCGGGGGCATCGCGGTGGTTTCGAAGAGAATACTTAGGGTTTCAACTGCAACGACTGACCGAGCGATCCAAATTCTATCATTGATATCAAAGCACTCGGCGAGGAAGGATGTTCTTTTGGAGATGTTGAGGGTTGGGGCAGTGTCAAAGCTTTGCATGATAATGCAATCTAATTGTGAGGGATACTTGAAGGAGAAGGCTAGAGAGATTTTGAGGATGCATTCAAATGTGTGGAGTAATTCTCCATGTATTGGGGTTTATGTGATGACTAGAGATCCTAGATAG

Protein sequence

MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVENAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGRMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTRDPR

Homology

[Close]

BLAST of Lsi06G006200 vs. ExPASy Swiss-Prot
Match: Q9SF15 (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-64
Identity = 164/433 (37.88%), Postives = 237/433 (54.73%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVT  +GITYDR++I  W    +    CP+TKQ L   SDLTPNH LRRLI+ W VE
Sbjct: 23  MKDPVTTVSGITYDRQNIVKWL---EKVPSCPVTKQPLPLDSDLTPNHMLRRLIQHWCVE 82

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRF-RIDVVKKLQALAIESDTASRG 120
           N     G  +I  P+    K  + + +++L     +   R + ++KL+ LA++ +  +R 
Sbjct: 83  NET--RGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLEVLAMDGN--NRR 142

Query: 121 RMEEVGVAKGMVLFVIRCFREG-----RVGGLEEALKILSLLSNYSISETRAL----DFF 180
            M E GV K ++LFV++C  E      R+ GL+E+L++L L+   S      L       
Sbjct: 143 LMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSNDAKTILMENDRVM 202

Query: 181 ESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLL-------- 240
           ESLTW+L  E     + K+Y + +L+  T+   S I+ ++  E+FK I   L        
Sbjct: 203 ESLTWVLHQE---DFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKGIIGFLKDVVNSVN 262

Query: 241 ------REKISNSS---------------------LKTTLTVLTNVCPWGRNRIKLVEVG 300
                 RE + +SS                     +   L +L     W RNR  LV++G
Sbjct: 263 RTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLETSSWSRNRSLLVDLG 322

Query: 301 AVFDLIALELE-KPEKNITELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTAT 360
           AV +LI LE+    EK ITEL+  +L+ LC  A+GRAE++ H GGIAVV+KR+LRVS A 
Sbjct: 323 AVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKRLLRVSPAA 382

Query: 361 TDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVW 388
            DRAI IL+ +SK S    V+ EM+ VG V KLC ++  +C   LKEKA+EIL+ H + W
Sbjct: 383 DDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEILKDHFDEW 442

[Close]

BLAST of Lsi06G006200 vs. ExPASy Swiss-Prot
Match: Q84TG3 (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 6.4e-64
Identity = 149/390 (38.21%), Postives = 232/390 (59.49%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPV  +TGITYDR+SIE W    K    CP+TKQ +T A DLTPNHTLRRLI+SW   
Sbjct: 25  MKDPVIVSTGITYDRDSIEKWLFAGKKN-SCPVTKQDITDA-DLTPNHTLRRLIQSWCTL 84

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+   G ++I  P+P + K+ + KL+RD A++ ++  ++  +K+L+ +  E+ T  R  
Sbjct: 85  NAS--YGVERIPTPRPPICKSEIEKLIRDSASSHEN--QVKCLKRLRQIVSENATNKR-C 144

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKIL-------SLLSNYSISETRALDFFESL 180
           +E  GV + +   V      G +   +EAL +L       ++L N  ++  +  +  +SL
Sbjct: 145 LEAAGVPEFLANIVSNDSENGSL--TDEALNLLYHLETSETVLKNL-LNNKKDNNIVKSL 204

Query: 181 TWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKT 240
           T I+   M      + YA  +LK   +VA       +K E+F  +  +L ++IS  + K 
Sbjct: 205 TKIMQRGMYES---RVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKA 264

Query: 241 TLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEK---PEKNITELIFNLLAHLCSTADGR 300
            + +L N+CPWGRNR K VE G +  +I L +++    E+   E+   +L  LC  A+GR
Sbjct: 265 AMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGR 324

Query: 301 AELIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMI 360
           AE + H   IAVV K+ILRVS   +DRA+++L  + +  A   +L EML++G V+KLC++
Sbjct: 325 AEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVAKLCLV 384

Query: 361 MQSNCEGYLKEKAREILRMHSNVWSNSPCI 381
           +Q +C G  KEKA+E+L++H+ VW +SPC+
Sbjct: 385 LQVSCGGKTKEKAKELLKLHARVWKDSPCL 401

[Close]

BLAST of Lsi06G006200 vs. ExPASy Swiss-Prot
Match: Q9SVC6 (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.3e-58
Identity = 144/416 (34.62%), Postives = 232/416 (55.77%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPV  +TGITYDRESIE W  + K    CP+TKQ +T+ +DLTPNHTLRRLI+SW   
Sbjct: 20  MKDPVIVSTGITYDRESIEKWLFSGKKN-SCPVTKQVITE-TDLTPNHTLRRLIQSWCTL 79

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+   G ++I  PKP + K+ + KL+++  ++S    ++  +K+L+ +  E+ T  R  
Sbjct: 80  NAS--YGIERIPTPKPPICKSEIEKLIKE--SSSSHLNQVKCLKRLRQIVSENTTNKR-C 139

Query: 121 MEEVGVAKGMVLFVIRC-----------------------FREGRVGG----LEEALKIL 180
           +E   V + +   V                            E R       ++EAL +L
Sbjct: 140 LEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVL 199

Query: 181 SLLSNYS------ISETRALDFFESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTIL 240
             L          ++  +  +  ++LT I+   +      ++YA  +LKK  +VA    +
Sbjct: 200 YHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYES---RAYAALLLKKLLEVADPMQI 259

Query: 241 SQIKLELFKNITNLLREKISNSSLKTTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELE- 300
             ++ ELF  +  +L ++IS+ + ++ + +L   CPWGRNR K VE G +  +I L ++ 
Sbjct: 260 ILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDD 319

Query: 301 --KPEKNITELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTATTDRAIQILSL 360
               E+  +E+   +L  LC  A+GRAE + H   IAVVSK+ILRVS  T++RA+++L  
Sbjct: 320 TFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLS 379

Query: 361 ISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVWSNSPCI 381
           + +  A   +L EML++G V+KLC+++Q +C    KEKA+E+L++H+ VW  SPC+
Sbjct: 380 VGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRESPCV 425

[Close]

BLAST of Lsi06G006200 vs. ExPASy Swiss-Prot
Match: Q9LT79 (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.1e-22
Identity = 111/389 (28.53%), Postives = 182/389 (46.79%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           M+DPVT  TG TYDR SIE+W         CP+T+  L+  + L PNHTLRRLI+ W V 
Sbjct: 27  MQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPLSDFT-LIPNHTLRRLIQEWCVA 86

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLA----TASDDRFRIDVVKKLQALAIESDTA 120
           N +   G ++I  PK   D T +R LL   +    T    R R   +++L+  A +SD  
Sbjct: 87  NRS--NGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLRGFARDSD-- 146

Query: 121 SRGRMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLL----SNYSI---SETRALDF 180
            + R+         +L  I          + E+L +L +L     N  +   S+   ++F
Sbjct: 147 -KNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRVEF 206

Query: 181 FESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISN- 240
              L +   +E   +       V    K+ D+  S   S+    +F+ + +LLR  IS+ 
Sbjct: 207 LTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSE---SVFEGVLDLLRNPISSR 266

Query: 241 SSLKTTLTVLTNVCPWGRNRIKLVEVGA---VFDLIALELEKPEKNITELIFNLLAHLCS 300
            +LK  +  L  +C     R   +  GA   + D +A + ++ +   TE     +  LC 
Sbjct: 267 RALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCD---TERALATVELLCR 326

Query: 301 TADGRAELIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVS 360
           T +G A    HA  + ++ K ILRVS   T+ A    +L++  +A +    E    G V 
Sbjct: 327 TPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAG--ALLALCTAEERWREEAAGAGVVV 386

Query: 361 KLCMIMQSNCEGYLKEKAREILRMHSNVW 375
           +L +++QS C    K+KA+++L++  + W
Sbjct: 387 QLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of Lsi06G006200 vs. ExPASy Swiss-Prot
Match: Q9FXA4 (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-21
Identity = 113/407 (27.76%), Postives = 188/407 (46.19%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           M DPVT +TG TYDR SI++W         CP+T+ +L+  + L PNHTLRRLI+ W V 
Sbjct: 27  MSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVALSDFT-LIPNHTLRRLIQEWCVA 86

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLA----TASDDRFRIDVVKKLQALAIESDTA 120
           N +   G ++I  PK   D   +R LL   +    T    R R   +++L+ LA +S+  
Sbjct: 87  NRS--NGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLRGLARDSE-- 146

Query: 121 SRGRMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLT-- 180
                      K  VL      RE  V  L   ++  S LS+  +SE+ AL     +T  
Sbjct: 147 -----------KNRVLIAGHNAREILVRILFADIETTS-LSSELVSESLALLVLLHMTET 206

Query: 181 -------------WILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQI---KLELFKNI 240
                        ++  L  ++ I I+  A  +++     A S  L  I      +F+ +
Sbjct: 207 ECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGV 266

Query: 241 TNLLREKISN-SSLKTTLTVLTNVCPWGRNRIKLVEVGA---VFDLIALELEKPEKNITE 300
            +LL+  IS+  +LK  +  +  +C   + R   +  GA   + D +A + ++ +   TE
Sbjct: 267 LDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD---TE 326

Query: 301 LIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTATTDRAI-QILSLISKHSARKD 360
                +  LC   +G A    HA  + ++ K ILRVS   T+ A   +L+L +     +D
Sbjct: 327 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCRD 386

Query: 361 VLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVWSNSPCI 381
              E    G V++L +++QS+C    K KA+ +L++  + W +   +
Sbjct: 387 ---EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408

[Close]

BLAST of Lsi06G006200 vs. ExPASy TrEMBL
Match: A0A5A7TDP8 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00240 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.3e-195
Identity = 354/390 (90.77%), Postives = 370/390 (94.87%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWFLTSK AIFCPLTKQSLTKASDLTPNHTLRRLIKSW+VE
Sbjct: 19  MKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQSLTKASDLTPNHTLRRLIKSWMVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+PGGG D+ L P PLLDKTRLRKLLR++A ASD+R RID VKKL ALAIESDTASRGR
Sbjct: 79  NASPGGGDDEFLTPSPLLDKTRLRKLLREVAVASDERLRIDAVKKLHALAIESDTASRGR 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           MEEVGVAKGMVLFVIR FREGR+GGLEEALKILSLLS+YSISE R L+FFESLTW+LGLE
Sbjct: 139 MEEVGVAKGMVLFVIRRFREGRIGGLEEALKILSLLSHYSISEIRFLEFFESLTWVLGLE 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLTN 240
           MENH IIKSYA+EVLKKATDVAPSTIL+QI LE FKNITNL REKISNSSLKTTLT+L N
Sbjct: 199 MENHTIIKSYAIEVLKKATDVAPSTILTQINLEFFKNITNLFREKISNSSLKTTLTMLIN 258

Query: 241 VCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGGI 300
           +CPWGRNR+KLVEVGAVFDLI LELEKPEKNITELIFNLLAHLCSTADGRAELI HAGGI
Sbjct: 259 ICPWGRNRVKLVEVGAVFDLIELELEKPEKNITELIFNLLAHLCSTADGRAELISHAGGI 318

Query: 301 AVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLK 360
           AVVSKRILRVS ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEG+LK
Sbjct: 319 AVVSKRILRVSIATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGFLK 378

Query: 361 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           EKAREILRMHSNVWSNSPCIGVYVMTRDPR
Sbjct: 379 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 408

[Close]

BLAST of Lsi06G006200 vs. ExPASy TrEMBL
Match: A0A1S3BP96 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492061 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.3e-195
Identity = 354/390 (90.77%), Postives = 370/390 (94.87%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWFLTSK AIFCPLTKQSLTKASDLTPNHTLRRLIKSW+VE
Sbjct: 19  MKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQSLTKASDLTPNHTLRRLIKSWMVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+PGGG D+ L P PLLDKTRLRKLLR++A ASD+R RID VKKL ALAIESDTASRGR
Sbjct: 79  NASPGGGDDEFLTPSPLLDKTRLRKLLREVAVASDERLRIDAVKKLHALAIESDTASRGR 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           MEEVGVAKGMVLFVIR FREGR+GGLEEALKILSLLS+YSISE R L+FFESLTW+LGLE
Sbjct: 139 MEEVGVAKGMVLFVIRRFREGRIGGLEEALKILSLLSHYSISEIRFLEFFESLTWVLGLE 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLTN 240
           MENH IIKSYA+EVLKKATDVAPSTIL+QI LE FKNITNL REKISNSSLKTTLT+L N
Sbjct: 199 MENHTIIKSYAIEVLKKATDVAPSTILTQINLEFFKNITNLFREKISNSSLKTTLTMLIN 258

Query: 241 VCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGGI 300
           +CPWGRNR+KLVEVGAVFDLI LELEKPEKNITELIFNLLAHLCSTADGRAELI HAGGI
Sbjct: 259 ICPWGRNRVKLVEVGAVFDLIELELEKPEKNITELIFNLLAHLCSTADGRAELISHAGGI 318

Query: 301 AVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLK 360
           AVVSKRILRVS ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEG+LK
Sbjct: 319 AVVSKRILRVSIATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGFLK 378

Query: 361 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           EKAREILRMHSNVWSNSPCIGVYVMTRDPR
Sbjct: 379 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 408

[Close]

BLAST of Lsi06G006200 vs. ExPASy TrEMBL
Match: A0A0A0M309 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G633420 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 4.9e-192
Identity = 354/391 (90.54%), Postives = 372/391 (95.14%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSK-AAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLV 60
           MKDPVTATTGITYDRESI+NWFLTSK  AIFCPLTKQSLTKASDLTPNHTLRRLIKSW+V
Sbjct: 19  MKDPVTATTGITYDRESIQNWFLTSKDDAIFCPLTKQSLTKASDLTPNHTLRRLIKSWMV 78

Query: 61  ENAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRG 120
           ENA+  GG DQIL P+PLLDKT LRK+LR++A ASD+R RID VKKL ALAIESDTA+RG
Sbjct: 79  ENASSAGGDDQILTPRPLLDKTCLRKILREVA-ASDERLRIDSVKKLHALAIESDTANRG 138

Query: 121 RMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGL 180
           RMEEVGVAKGMVLFVIR FREGRVGGLEEALKILSLLS+YSISETR LDFFESLTW+LGL
Sbjct: 139 RMEEVGVAKGMVLFVIRRFREGRVGGLEEALKILSLLSHYSISETRVLDFFESLTWVLGL 198

Query: 181 EMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLT 240
           EMENHIIIKSYA+EVLKKATDVAPSTIL+QI +E FKNITNLLREKISNSSLKTTLT+LT
Sbjct: 199 EMENHIIIKSYAIEVLKKATDVAPSTILTQINIEFFKNITNLLREKISNSSLKTTLTILT 258

Query: 241 NVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGG 300
           N+CP GRNR+KLVEVGAVFDLIALELEKPEK  TELIFNLLAHLCSTADGRAELIRHAGG
Sbjct: 259 NICPCGRNRVKLVEVGAVFDLIALELEKPEKKTTELIFNLLAHLCSTADGRAELIRHAGG 318

Query: 301 IAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYL 360
           IAVVSKRILRVS ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCM+MQSNCEGYL
Sbjct: 319 IAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMMMQSNCEGYL 378

Query: 361 KEKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           KEKAREILRMHSNVWSNSPCIGVYVMTRDPR
Sbjct: 379 KEKAREILRMHSNVWSNSPCIGVYVMTRDPR 408

[Close]

BLAST of Lsi06G006200 vs. ExPASy TrEMBL
Match: A0A6J1HAU5 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461696 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 3.0e-181
Identity = 331/398 (83.17%), Postives = 358/398 (89.95%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWF+TSK AIFCPLTKQ LTKASDLTPNHTL RLIKSWLVE
Sbjct: 19  MKDPVTATTGITYDRESIENWFMTSKDAIFCPLTKQPLTKASDLTPNHTLHRLIKSWLVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA PG G D+IL+P+PLLDKT LRKLLRDL TASDD  R D V+KL ALAIE DTA RGR
Sbjct: 79  NATPGSGFDRILSPRPLLDKTHLRKLLRDL-TASDDGLRHDAVRKLYALAIEGDTACRGR 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           M EVGVAKGMVLFV+RCF+EG+VGGLEE LKILS+L +YSI ETR LD  +SL W+LGLE
Sbjct: 139 MVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICETRVLDVIDSLNWVLGLE 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIK--------LELFKNITNLLREKISNSSLK 240
           MENHIIIKSYA+EVLKKA D APST++S  +        L+ FKN+TNLLREKISNS+LK
Sbjct: 199 MENHIIIKSYAIEVLKKAIDAAPSTVISGYEPRYQGFESLQFFKNVTNLLREKISNSALK 258

Query: 241 TTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAE 300
           TTLT+LT +C WGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLC+ ADGRAE
Sbjct: 259 TTLTILTKLCHWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCTMADGRAE 318

Query: 301 LIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQ 360
           L+RHAGGIAVVSKRILRVS ATTDRAIQILSLISKHSARKDVL+EMLRVGAVSKLCM+MQ
Sbjct: 319 LVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCMVMQ 378

Query: 361 SNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           S+CEGYLKEKAREILRMHSNVWSNSPCIGVY+MTRDPR
Sbjct: 379 SDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTRDPR 415

[Close]

BLAST of Lsi06G006200 vs. ExPASy TrEMBL
Match: A0A6J1JGZ2 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485014 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.5e-180
Identity = 332/405 (81.98%), Postives = 359/405 (88.64%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWFLTSK AIFCPLTKQ LTKASDLTPNHTL RLIKSWLVE
Sbjct: 19  MKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASDLTPNHTLHRLIKSWLVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA PG G D+IL+P+PLLDKT LRKLLRDL TASDD  R D V+KL ALAIE DTA RGR
Sbjct: 79  NATPGSGFDRILSPRPLLDKTHLRKLLRDL-TASDDGLRHDAVRKLYALAIEGDTACRGR 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           M EVGVAKGMVLFV+RCF+EG+VGGLEE LKILS+L +YSI ETR LD  +SL W+LGLE
Sbjct: 139 MVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICETRVLDVIDSLNWVLGLE 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIK---------------LELFKNITNLLREK 240
           MENHIIIKSYA+EVLKKA D APST++S  +               L+ FKN+TNLLREK
Sbjct: 199 MENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQGFESLQFFKNVTNLLREK 258

Query: 241 ISNSSLKTTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCS 300
           ISNS+LKTTLT+LT +C WGRNRIKLVEVGAVF+LIALELEKPEKNITELIFNLLAHLC+
Sbjct: 259 ISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEKPEKNITELIFNLLAHLCT 318

Query: 301 TADGRAELIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVS 360
           TADGRAEL+RHAGGIAVVSKRILRVS ATTDRAIQILSLISKHSARKDVL+EMLRVGAVS
Sbjct: 319 TADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVS 378

Query: 361 KLCMIMQSNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           KLCM+MQS+CEGYLKEKAREILRMHSNVWSNSPCIGVY+MTRDPR
Sbjct: 379 KLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTRDPR 422

[Close]

BLAST of Lsi06G006200 vs. NCBI nr
Match: XP_038879919.1 (E3 ubiquitin-protein ligase PUB24-like [Benincasa hispida])

HSP 1 Score: 703.0 bits (1813), Expect = 1.5e-198
Identity = 360/390 (92.31%), Postives = 375/390 (96.15%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWFLTSK AIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE
Sbjct: 19  MKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA PGGG DQIL PKP LDKTRLRKLL+DL+ ASD+R RI+ VKKL+ALAIESDTA+RG 
Sbjct: 79  NAGPGGGVDQILNPKPPLDKTRLRKLLQDLSVASDNRLRIEAVKKLEALAIESDTANRGS 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           MEEVGVAKGMVLFVIRCFREGRVGGLEEAL ILSLLSNYSISETR +DFFESLTW+LGL+
Sbjct: 139 MEEVGVAKGMVLFVIRCFREGRVGGLEEALNILSLLSNYSISETRVVDFFESLTWVLGLK 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLTN 240
           MENHIIIKSYAVEVLKKATDVAPSTIL+QI LELFKNITNLLREKISNSSLKTTLT+LTN
Sbjct: 199 MENHIIIKSYAVEVLKKATDVAPSTILTQINLELFKNITNLLREKISNSSLKTTLTILTN 258

Query: 241 VCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGGI 300
           VCPWG+NRIKLV+VG VFDLIALELEKP KNITELIFNLLAHLCSTADGRAEL+RHAGGI
Sbjct: 259 VCPWGQNRIKLVKVGTVFDLIALELEKPAKNITELIFNLLAHLCSTADGRAELLRHAGGI 318

Query: 301 AVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLK 360
           AVVSKRILRVS ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCM+MQSNCEGYLK
Sbjct: 319 AVVSKRILRVSPATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMMMQSNCEGYLK 378

Query: 361 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           EKAREILRMHSNVWSNSPCIGVYVMTRDPR
Sbjct: 379 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 408

[Close]

BLAST of Lsi06G006200 vs. NCBI nr
Match: XP_008450468.1 (PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Cucumis melo] >KAA0040216.1 E3 ubiquitin-protein ligase PUB24-like [Cucumis melo var. makuwa] >TYK07878.1 E3 ubiquitin-protein ligase PUB24-like [Cucumis melo var. makuwa])

HSP 1 Score: 692.2 bits (1785), Expect = 2.6e-195
Identity = 354/390 (90.77%), Postives = 370/390 (94.87%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWFLTSK AIFCPLTKQSLTKASDLTPNHTLRRLIKSW+VE
Sbjct: 19  MKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQSLTKASDLTPNHTLRRLIKSWMVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+PGGG D+ L P PLLDKTRLRKLLR++A ASD+R RID VKKL ALAIESDTASRGR
Sbjct: 79  NASPGGGDDEFLTPSPLLDKTRLRKLLREVAVASDERLRIDAVKKLHALAIESDTASRGR 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           MEEVGVAKGMVLFVIR FREGR+GGLEEALKILSLLS+YSISE R L+FFESLTW+LGLE
Sbjct: 139 MEEVGVAKGMVLFVIRRFREGRIGGLEEALKILSLLSHYSISEIRFLEFFESLTWVLGLE 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLTN 240
           MENH IIKSYA+EVLKKATDVAPSTIL+QI LE FKNITNL REKISNSSLKTTLT+L N
Sbjct: 199 MENHTIIKSYAIEVLKKATDVAPSTILTQINLEFFKNITNLFREKISNSSLKTTLTMLIN 258

Query: 241 VCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGGI 300
           +CPWGRNR+KLVEVGAVFDLI LELEKPEKNITELIFNLLAHLCSTADGRAELI HAGGI
Sbjct: 259 ICPWGRNRVKLVEVGAVFDLIELELEKPEKNITELIFNLLAHLCSTADGRAELISHAGGI 318

Query: 301 AVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLK 360
           AVVSKRILRVS ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEG+LK
Sbjct: 319 AVVSKRILRVSIATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGFLK 378

Query: 361 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           EKAREILRMHSNVWSNSPCIGVYVMTRDPR
Sbjct: 379 EKAREILRMHSNVWSNSPCIGVYVMTRDPR 408

[Close]

BLAST of Lsi06G006200 vs. NCBI nr
Match: XP_004139143.1 (E3 ubiquitin-protein ligase PUB23 [Cucumis sativus] >KGN66591.1 hypothetical protein Csa_007018 [Cucumis sativus])

HSP 1 Score: 680.2 bits (1754), Expect = 1.0e-191
Identity = 354/391 (90.54%), Postives = 372/391 (95.14%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSK-AAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLV 60
           MKDPVTATTGITYDRESI+NWFLTSK  AIFCPLTKQSLTKASDLTPNHTLRRLIKSW+V
Sbjct: 19  MKDPVTATTGITYDRESIQNWFLTSKDDAIFCPLTKQSLTKASDLTPNHTLRRLIKSWMV 78

Query: 61  ENAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRG 120
           ENA+  GG DQIL P+PLLDKT LRK+LR++A ASD+R RID VKKL ALAIESDTA+RG
Sbjct: 79  ENASSAGGDDQILTPRPLLDKTCLRKILREVA-ASDERLRIDSVKKLHALAIESDTANRG 138

Query: 121 RMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGL 180
           RMEEVGVAKGMVLFVIR FREGRVGGLEEALKILSLLS+YSISETR LDFFESLTW+LGL
Sbjct: 139 RMEEVGVAKGMVLFVIRRFREGRVGGLEEALKILSLLSHYSISETRVLDFFESLTWVLGL 198

Query: 181 EMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKTTLTVLT 240
           EMENHIIIKSYA+EVLKKATDVAPSTIL+QI +E FKNITNLLREKISNSSLKTTLT+LT
Sbjct: 199 EMENHIIIKSYAIEVLKKATDVAPSTILTQINIEFFKNITNLLREKISNSSLKTTLTILT 258

Query: 241 NVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAELIRHAGG 300
           N+CP GRNR+KLVEVGAVFDLIALELEKPEK  TELIFNLLAHLCSTADGRAELIRHAGG
Sbjct: 259 NICPCGRNRVKLVEVGAVFDLIALELEKPEKKTTELIFNLLAHLCSTADGRAELIRHAGG 318

Query: 301 IAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYL 360
           IAVVSKRILRVS ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCM+MQSNCEGYL
Sbjct: 319 IAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMMMQSNCEGYL 378

Query: 361 KEKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           KEKAREILRMHSNVWSNSPCIGVYVMTRDPR
Sbjct: 379 KEKAREILRMHSNVWSNSPCIGVYVMTRDPR 408

[Close]

BLAST of Lsi06G006200 vs. NCBI nr
Match: XP_022961078.1 (E3 ubiquitin-protein ligase PUB24-like [Cucurbita moschata] >KAG7023800.1 E3 ubiquitin-protein ligase PUB24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.4 bits (1661), Expect = 6.2e-181
Identity = 331/398 (83.17%), Postives = 358/398 (89.95%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWF+TSK AIFCPLTKQ LTKASDLTPNHTL RLIKSWLVE
Sbjct: 19  MKDPVTATTGITYDRESIENWFMTSKDAIFCPLTKQPLTKASDLTPNHTLHRLIKSWLVE 78

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA PG G D+IL+P+PLLDKT LRKLLRDL TASDD  R D V+KL ALAIE DTA RGR
Sbjct: 79  NATPGSGFDRILSPRPLLDKTHLRKLLRDL-TASDDGLRHDAVRKLYALAIEGDTACRGR 138

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           M EVGVAKGMVLFV+RCF+EG+VGGLEE LKILS+L +YSI ETR LD  +SL W+LGLE
Sbjct: 139 MVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICETRVLDVIDSLNWVLGLE 198

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIK--------LELFKNITNLLREKISNSSLK 240
           MENHIIIKSYA+EVLKKA D APST++S  +        L+ FKN+TNLLREKISNS+LK
Sbjct: 199 MENHIIIKSYAIEVLKKAIDAAPSTVISGYEPRYQGFESLQFFKNVTNLLREKISNSALK 258

Query: 241 TTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAE 300
           TTLT+LT +C WGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLC+ ADGRAE
Sbjct: 259 TTLTILTKLCHWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCTMADGRAE 318

Query: 301 LIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQ 360
           L+RHAGGIAVVSKRILRVS ATTDRAIQILSLISKHSARKDVL+EMLRVGAVSKLCM+MQ
Sbjct: 319 LVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCMVMQ 378

Query: 361 SNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           S+CEGYLKEKAREILRMHSNVWSNSPCIGVY+MTRDPR
Sbjct: 379 SDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTRDPR 415

[Close]

BLAST of Lsi06G006200 vs. NCBI nr
Match: KAG6590133.1 (E3 ubiquitin-protein ligase PUB24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 644.4 bits (1661), Expect = 6.2e-181
Identity = 331/398 (83.17%), Postives = 358/398 (89.95%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVTATTGITYDRESIENWF+TSK AIFCPLTKQ LTKASDLTPNHTL RLIKSWLVE
Sbjct: 1   MKDPVTATTGITYDRESIENWFMTSKDAIFCPLTKQPLTKASDLTPNHTLHRLIKSWLVE 60

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA PG G D+IL+P+PLLDKT LRKLLRDL TASDD  R D V+KL ALAIE DTA RGR
Sbjct: 61  NATPGSGFDRILSPRPLLDKTHLRKLLRDL-TASDDGLRHDAVRKLYALAIEGDTACRGR 120

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLTWILGLE 180
           M EVGVAKGMVLFV+RCF+EG+VGGLEE LKILS+L +YSI ETR LD  +SL W+LGLE
Sbjct: 121 MVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICETRVLDVIDSLNWVLGLE 180

Query: 181 MENHIIIKSYAVEVLKKATDVAPSTILSQIK--------LELFKNITNLLREKISNSSLK 240
           MENHIIIKSYA+EVLKKA D APST++S  +        L+ FKN+TNLLREKISNS+LK
Sbjct: 181 MENHIIIKSYAIEVLKKAIDAAPSTVISGYEPRYQGFESLQFFKNVTNLLREKISNSALK 240

Query: 241 TTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCSTADGRAE 300
           TTLT+LT +C WGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLC+ ADGRAE
Sbjct: 241 TTLTILTKLCHWGRNRIKLVEVGAVFDLIALELEKPEKNITELIFNLLAHLCTMADGRAE 300

Query: 301 LIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQ 360
           L+RHAGGIAVVSKRILRVS ATTDRAIQILSLISKHSARKDVL+EMLRVGAVSKLCM+MQ
Sbjct: 301 LVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCMVMQ 360

Query: 361 SNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTRDPR 391
           S+CEGYLKEKAREILRMHSNVWSNSPCIGVY+MTRDPR
Sbjct: 361 SDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTRDPR 397

[Close]

BLAST of Lsi06G006200 vs. TAIR 10
Match: AT3G11840.1 (plant U-box 24 )

HSP 1 Score: 248.4 bits (633), Expect = 9.2e-66
Identity = 164/433 (37.88%), Postives = 237/433 (54.73%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPVT  +GITYDR++I  W    +    CP+TKQ L   SDLTPNH LRRLI+ W VE
Sbjct: 37  MKDPVTTVSGITYDRQNIVKWL---EKVPSCPVTKQPLPLDSDLTPNHMLRRLIQHWCVE 96

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRF-RIDVVKKLQALAIESDTASRG 120
           N     G  +I  P+    K  + + +++L     +   R + ++KL+ LA++ +  +R 
Sbjct: 97  NET--RGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLEVLAMDGN--NRR 156

Query: 121 RMEEVGVAKGMVLFVIRCFREG-----RVGGLEEALKILSLLSNYSISETRAL----DFF 180
            M E GV K ++LFV++C  E      R+ GL+E+L++L L+   S      L       
Sbjct: 157 LMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSNDAKTILMENDRVM 216

Query: 181 ESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLL-------- 240
           ESLTW+L  E     + K+Y + +L+  T+   S I+ ++  E+FK I   L        
Sbjct: 217 ESLTWVLHQE---DFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKGIIGFLKDVVNSVN 276

Query: 241 ------REKISNSS---------------------LKTTLTVLTNVCPWGRNRIKLVEVG 300
                 RE + +SS                     +   L +L     W RNR  LV++G
Sbjct: 277 RTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLETSSWSRNRSLLVDLG 336

Query: 301 AVFDLIALELE-KPEKNITELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTAT 360
           AV +LI LE+    EK ITEL+  +L+ LC  A+GRAE++ H GGIAVV+KR+LRVS A 
Sbjct: 337 AVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKRLLRVSPAA 396

Query: 361 TDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVW 388
            DRAI IL+ +SK S    V+ EM+ VG V KLC ++  +C   LKEKA+EIL+ H + W
Sbjct: 397 DDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEILKDHFDEW 456

[Close]

BLAST of Lsi06G006200 vs. TAIR 10
Match: AT2G35930.1 (plant U-box 23 )

HSP 1 Score: 246.1 bits (627), Expect = 4.6e-65
Identity = 149/390 (38.21%), Postives = 232/390 (59.49%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPV  +TGITYDR+SIE W    K    CP+TKQ +T A DLTPNHTLRRLI+SW   
Sbjct: 25  MKDPVIVSTGITYDRDSIEKWLFAGKKN-SCPVTKQDITDA-DLTPNHTLRRLIQSWCTL 84

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+   G ++I  P+P + K+ + KL+RD A++ ++  ++  +K+L+ +  E+ T  R  
Sbjct: 85  NAS--YGVERIPTPRPPICKSEIEKLIRDSASSHEN--QVKCLKRLRQIVSENATNKR-C 144

Query: 121 MEEVGVAKGMVLFVIRCFREGRVGGLEEALKIL-------SLLSNYSISETRALDFFESL 180
           +E  GV + +   V      G +   +EAL +L       ++L N  ++  +  +  +SL
Sbjct: 145 LEAAGVPEFLANIVSNDSENGSL--TDEALNLLYHLETSETVLKNL-LNNKKDNNIVKSL 204

Query: 181 TWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISNSSLKT 240
           T I+   M      + YA  +LK   +VA       +K E+F  +  +L ++IS  + K 
Sbjct: 205 TKIMQRGMYES---RVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKA 264

Query: 241 TLTVLTNVCPWGRNRIKLVEVGAVFDLIALELEK---PEKNITELIFNLLAHLCSTADGR 300
            + +L N+CPWGRNR K VE G +  +I L +++    E+   E+   +L  LC  A+GR
Sbjct: 265 AMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGR 324

Query: 301 AELIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMI 360
           AE + H   IAVV K+ILRVS   +DRA+++L  + +  A   +L EML++G V+KLC++
Sbjct: 325 AEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVAKLCLV 384

Query: 361 MQSNCEGYLKEKAREILRMHSNVWSNSPCI 381
           +Q +C G  KEKA+E+L++H+ VW +SPC+
Sbjct: 385 LQVSCGGKTKEKAKELLKLHARVWKDSPCL 401

[Close]

BLAST of Lsi06G006200 vs. TAIR 10
Match: AT3G52450.1 (plant U-box 22 )

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-59
Identity = 144/416 (34.62%), Postives = 232/416 (55.77%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           MKDPV  +TGITYDRESIE W  + K    CP+TKQ +T+ +DLTPNHTLRRLI+SW   
Sbjct: 20  MKDPVIVSTGITYDRESIEKWLFSGKKN-SCPVTKQVITE-TDLTPNHTLRRLIQSWCTL 79

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLATASDDRFRIDVVKKLQALAIESDTASRGR 120
           NA+   G ++I  PKP + K+ + KL+++  ++S    ++  +K+L+ +  E+ T  R  
Sbjct: 80  NAS--YGIERIPTPKPPICKSEIEKLIKE--SSSSHLNQVKCLKRLRQIVSENTTNKR-C 139

Query: 121 MEEVGVAKGMVLFVIRC-----------------------FREGRVGG----LEEALKIL 180
           +E   V + +   V                            E R       ++EAL +L
Sbjct: 140 LEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVL 199

Query: 181 SLLSNYS------ISETRALDFFESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTIL 240
             L          ++  +  +  ++LT I+   +      ++YA  +LKK  +VA    +
Sbjct: 200 YHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYES---RAYAALLLKKLLEVADPMQI 259

Query: 241 SQIKLELFKNITNLLREKISNSSLKTTLTVLTNVCPWGRNRIKLVEVGAVFDLIALELE- 300
             ++ ELF  +  +L ++IS+ + ++ + +L   CPWGRNR K VE G +  +I L ++ 
Sbjct: 260 ILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDD 319

Query: 301 --KPEKNITELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTATTDRAIQILSL 360
               E+  +E+   +L  LC  A+GRAE + H   IAVVSK+ILRVS  T++RA+++L  
Sbjct: 320 TFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLS 379

Query: 361 ISKHSARKDVLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVWSNSPCI 381
           + +  A   +L EML++G V+KLC+++Q +C    KEKA+E+L++H+ VW  SPC+
Sbjct: 380 VGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRESPCV 425

[Close]

BLAST of Lsi06G006200 vs. TAIR 10
Match: AT3G19380.1 (plant U-box 25 )

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-23
Identity = 111/389 (28.53%), Postives = 182/389 (46.79%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           M+DPVT  TG TYDR SIE+W         CP+T+  L+  + L PNHTLRRLI+ W V 
Sbjct: 27  MQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPLSDFT-LIPNHTLRRLIQEWCVA 86

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLA----TASDDRFRIDVVKKLQALAIESDTA 120
           N +   G ++I  PK   D T +R LL   +    T    R R   +++L+  A +SD  
Sbjct: 87  NRS--NGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLRGFARDSD-- 146

Query: 121 SRGRMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLL----SNYSI---SETRALDF 180
            + R+         +L  I          + E+L +L +L     N  +   S+   ++F
Sbjct: 147 -KNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRVEF 206

Query: 181 FESLTWILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQIKLELFKNITNLLREKISN- 240
              L +   +E   +       V    K+ D+  S   S+    +F+ + +LLR  IS+ 
Sbjct: 207 LTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSE---SVFEGVLDLLRNPISSR 266

Query: 241 SSLKTTLTVLTNVCPWGRNRIKLVEVGA---VFDLIALELEKPEKNITELIFNLLAHLCS 300
            +LK  +  L  +C     R   +  GA   + D +A + ++ +   TE     +  LC 
Sbjct: 267 RALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCD---TERALATVELLCR 326

Query: 301 TADGRAELIRHAGGIAVVSKRILRVSTATTDRAIQILSLISKHSARKDVLLEMLRVGAVS 360
           T +G A    HA  + ++ K ILRVS   T+ A    +L++  +A +    E    G V 
Sbjct: 327 TPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAG--ALLALCTAEERWREEAAGAGVVV 386

Query: 361 KLCMIMQSNCEGYLKEKAREILRMHSNVW 375
           +L +++QS C    K+KA+++L++  + W
Sbjct: 387 QLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of Lsi06G006200 vs. TAIR 10
Match: AT1G49780.1 (plant U-box 26 )

HSP 1 Score: 105.5 bits (262), Expect = 9.6e-23
Identity = 113/407 (27.76%), Postives = 188/407 (46.19%), Query Frame = 0


Query: 1   MKDPVTATTGITYDRESIENWFLTSKAAIFCPLTKQSLTKASDLTPNHTLRRLIKSWLVE 60
           M DPVT +TG TYDR SI++W         CP+T+ +L+  + L PNHTLRRLI+ W V 
Sbjct: 27  MSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVALSDFT-LIPNHTLRRLIQEWCVA 86

Query: 61  NAAPGGGADQILAPKPLLDKTRLRKLLRDLA----TASDDRFRIDVVKKLQALAIESDTA 120
           N +   G ++I  PK   D   +R LL   +    T    R R   +++L+ LA +S+  
Sbjct: 87  NRS--NGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLRGLARDSE-- 146

Query: 121 SRGRMEEVGVAKGMVLFVIRCFREGRVGGLEEALKILSLLSNYSISETRALDFFESLT-- 180
                      K  VL      RE  V  L   ++  S LS+  +SE+ AL     +T  
Sbjct: 147 -----------KNRVLIAGHNAREILVRILFADIETTS-LSSELVSESLALLVLLHMTET 206

Query: 181 -------------WILGLEMENHIIIKSYAVEVLKKATDVAPSTILSQI---KLELFKNI 240
                        ++  L  ++ I I+  A  +++     A S  L  I      +F+ +
Sbjct: 207 ECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGV 266

Query: 241 TNLLREKISN-SSLKTTLTVLTNVCPWGRNRIKLVEVGA---VFDLIALELEKPEKNITE 300
            +LL+  IS+  +LK  +  +  +C   + R   +  GA   + D +A + ++ +   TE
Sbjct: 267 LDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD---TE 326

Query: 301 LIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSTATTDRAI-QILSLISKHSARKD 360
                +  LC   +G A    HA  + ++ K ILRVS   T+ A   +L+L +     +D
Sbjct: 327 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCRD 386

Query: 361 VLLEMLRVGAVSKLCMIMQSNCEGYLKEKAREILRMHSNVWSNSPCI 381
              E    G V++L +++QS+C    K KA+ +L++  + W +   +
Sbjct: 387 ---EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408

The following BLAST results are available for this feature:

BLAST of Lsi06G006200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SF15	1.3e-64	37.88	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 ...	[more]
Q84TG3	6.4e-64	38.21	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 ...	[more]
Q9SVC6	5.3e-58	34.62	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]
Q9LT79	2.1e-22	28.53	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
Q9FXA4	1.4e-21	27.76	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]

BLAST of Lsi06G006200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDP8	1.3e-195	90.77	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BP96	1.3e-195	90.77	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492061 PE=4 ...	[more]
A0A0A0M309	4.9e-192	90.54	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G633420 PE...	[more]
A0A6J1HAU5	3.0e-181	83.17	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461696...	[more]
A0A6J1JGZ2	1.5e-180	81.98	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485014 P...	[more]

BLAST of Lsi06G006200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879919.1	1.5e-198	92.31	E3 ubiquitin-protein ligase PUB24-like [Benincasa hispida]	[more]
XP_008450468.1	2.6e-195	90.77	PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Cucumis melo] >KAA0040216.1 E...	[more]
XP_004139143.1	1.0e-191	90.54	E3 ubiquitin-protein ligase PUB23 [Cucumis sativus] >KGN66591.1 hypothetical pro...	[more]
XP_022961078.1	6.2e-181	83.17	E3 ubiquitin-protein ligase PUB24-like [Cucurbita moschata] >KAG7023800.1 E3 ubi...	[more]
KAG6590133.1	6.2e-181	83.17	E3 ubiquitin-protein ligase PUB24, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi06G006200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11840.1	9.2e-66	37.88	plant U-box 24	[more]
AT2G35930.1	4.6e-65	38.21	plant U-box 23	[more]
AT3G52450.1	3.7e-59	34.62	plant U-box 22	[more]
AT3G19380.1	1.5e-23	28.53	plant U-box 25	[more]
AT1G49780.1	9.6e-23	27.76	plant U-box 26	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 1..57 e-value: 3.2E-13 score: 59.9
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 1..61 e-value: 3.9E-11 score: 43.0
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 1..64 score: 23.212883
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..63 e-value: 1.3E-17 score: 65.6
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 80..369 e-value: 1.1E-11 score: 46.4
None	No IPR available	PANTHER	PTHR22849:SF24	E3 UBIQUITIN-PROTEIN LIGASE PUB24	coord: 1..386
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 1..386
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 1..63
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 93..374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G006200.1	Lsi06G006200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity