Lsi06G001810 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G001810
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	vesicle-associated protein 2-2-like
Location	chr06: 1950058 .. 1961240 (+)
RNA-Seq Expression	Lsi06G001810
Synteny	Lsi06G001810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCATCAAGCCATTATCAAATTGCGAAGTCTCATGTATGATCTCTTCAAATTTAATTTATTTATTTATTTTATTTTTTCATTAACCCTTTCGAAATATTTTTTATATATCTTGATGAATATGTGTAGCATATTTAGCTTGATTCCCTCCCAGATTTAAATAGTATAGCCCCGTTTGATAATTATTTTATTTTCGGTTTTTGATTTTTCAAAAGGATCTGTTTTTGGTTTTCAGTGGCGATTTATGGTAACCATTTTTTTTTGTTTTTTTTTATTTTTATTTTTGCTTTTAGAAAACAAAAACCATATTATTAGTCAATGTTTTATGGAGTTAATCGTTGGAAACAAACATTGTTAAATTCACAAATCTAGCAATAGTTTTTTAAATTTTGCAAATATAACAAAAAAATCATTAAAGCTTGTTGTTACTTTTTATTATACTAATTTTATCCTTATTGGTGTATTAAGCATGTATATATGCATATCAGTCAACTGATAGACTTTACATTTGCTATATAAGTTGACTAATATACGTACCAAATATAAAGTATATAAGTTATATAATCGGTATACTAAATTTACCATTTGTATATATATATCATAATTAACAGTTAACAAATGCTTGTACATTTGTTATTATTCATGCACTTTGACTGATACACTAAATAGAAATAAAAATTATATCAGTCATACAATTTATATACCAAATTTACCATTCATGCATTTATTATTAATCGTGGACTTAATCCAAATCTCTGTTCATTTATTTCAGTTTATTGTTTTTCTATTACATTAACATCAATTTATAATGGTTGAATTTGTCATGTGGTAACAATCCTATATACCGATTTTAGTGTATTATTTTTATTGAAAGTATGCGAACTAAAATTTATACATTACTGAACTCGAACAGGTCGAGAAAATACAATATCGACTAAAATGATATTTTAACCTTTAATGCGTAGTTACGATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGGTTTGGTAAATTTTTTTGGCAGCTTTGTATTTTTTTTATTTGTTGTTCTCAAATTTATATCATAACTTAACCATTTTTTCTTCAGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGTTTGTCTCTCCATAAATATTTTGCTTTTCATATATATTGTAAACTCTTGACCAAAATAATAAAAAAAGAATAGGGTAAATTGTAAATTTGATCCGGGGTGCTTGGAGAGCTGGAATGTAATCAGGATTATTGGGAATCAGAGGAGTGTTGGAAAGCGTGAGTAATTAATCAAAGATGGAACGGAAATGAGATTGTGAGGCATAAAAACGATGAGAAAGATGGTTGGATTGAAAACTGTCGGAACGAAATGAGTTCTGTATTACAAATTGGACAAAAAACGCTCAATCCAAACATGGATTTTGGATTACCTTACATTACATTCTCATCCCATTACGGGCCACCAAACACCTCCTATATATGTTTGGTGAAAGTTAGAGTTTAGTCTGTACCGTCTCTGTGATTTCAAAAAATTAAAATTTAGTCTTTAAGGTTTGATAAAACATCGAGACTACTTATGGGGGTTTCATCAAACTATAGAGACACTATACATTCTAATTATAAACTATAGGGACTAAATTCTAACGTTATCTGAATTCTAGGAATCAAATTTGTAATTTTACTAAGAGAAAAAGTTTTTTCAAGACCTTATTTACTATTGTGTCTTAATTTTTCAAATTCCTTTTATTACAGGCTGAAATTGCCATTTCAAAGCTACAAGAGGAAAAAACTAGAATCCCAAAAGCCAAATCCTTGCAAAAGAATTGCTTAGTTTCATGTTCAATTCTTTGAAAGAACCATGTTATGCCATTTTATATATTTTGCTCAAAAGTTGTGTTTAAGATAGATTTCAAAGTTGGTACATAAACTTTATTGATTCCTCTAAATTTATTTCTTGAACATTTGAATGGTAAATATTAATATCCTTATGCAATTTCGGGTAATGATTAGGTCTAGTCATTTTTCATACATAGTAGGAAAAAAAAATTAAAAAGATCAATTTTTTAAAAAACAAAAATTGCCACATGGCATATGTTGATTGAATCTTTTCTTTTGGTTTCACCCAAAAGACCTCGTACTACTGAAGATAGTTGTCCTCCCTTATAAACTCGTGATCATCCTCTACTTTGATCGCATTCCCAACAATCCTCCCCTTGAACAAAGGATCATCGAGCTTTCCTTAAATAATCATCTCTCTAAATTACACTTGAGCACACACTGCCTATCTGAAAGCTCAACCACGAAATAATCATTCCTTCGAACAAATCTCCAGATATTTCCACAATAATATGATATTGTCATTAAAATGTACTTCAACTTAAAGTACATTTTTCACCATTTCAAAAATCGTACTAGACCTAGTACTCTTATTAAAAATGTTGATGAATAATATAAATACAATACAAGTTTGATTTTTGTTAAACTAATATTAAATTAGGTATATAAATCTTATTTTTTTCTAAACTTTTACATTTTGTTATGTCACGTTATCATTTAGTTAACTAGAGAAACTACACAAAATATTTACAATTATCACTTAAGCATTAAAATTAAGGGAAATTACTATAAACAAAAAAAAAAAATCAAATTATTTACAAATATAGAAAAATTTCACTTTCTATCAGTGATAGACCACGATAGAACTTTCTATCACTTAAACAAATAAATTTTATCGCTTGAGCGATAGAAAGTGATAGAATTCTCTTGCAGTCTATCACTGATAGACTGTAAAATTTTTCTATATTTGTAAATAGTTTATTTCATTTTTCTATATTTGAAAACCGCACTAAAACTAATGTACCAACTTTGAAATCTAACTTCAACAATAACTTCAAAATTAGATATTAAAACTATAATTGGGCATATATCAATAAACCAATAGCTTCACAATCATCATATGTAGAATGCCATTAGAGGGTTCTTTCAAAGAATTGTGCAATTCTTTTGCAAGGATTTGGTTTTTTTAATTGTTCTTTCCTTTTCTAGCTTCGAAATAGCAACCCGAGCCTGTAAAATAAAGGAAGTTTGAAGGATTCACATTACTATCGGGCAAAATAAAATAAAATAAAATACTTAAAATTGTTTAGTTCCGTTTAGGAACTAATTTGATTTTCAATTTTTAGTTTGGAAAATTTTTAAAAATAGAAAAATAAAAGAAACTATTAATACAAAATAACAAAAAATTTAGATAGTTGTGATAGAAATGATAGAAGTCTATCACTGATAGATATTGATAGAAATCTATCAATGTCTATCAGTGTTTTTTTGTTATTTTCTGTAAATAGTTTGACACTTTTTAAATCTGTAAAAATTTCTCTTTTGGTTTTTAAAAATTATGTTTGGTTTCTCACAATTTCTTACTCATGGTTTTCATATTTTTCTATGTAAAGCATTTAACTTCTTAGTCAGTTTCTAAAAACAAAAACAAATTTTTAAAACTTACACCTCATTTGGTAACCAGTTGACTTTTAGTTTTTAGTTTTTGAAAAATAAGCCTATAAACAGAAACACTCTTTCCACCTCTAAATTTTTTGTTTTGTTATCTATTTTTTTTACCAATGTTTTCAAAAACCAAATTAAATTTTGAAAACTAAAAAAAATAGATTTTAAAAACTTGTTTTTATTTTTAGAATTTGACTAAGAATTTAACTGTTTTACTTAAAAAAGATGCAAACTATTGTAAAAAAAAATTGATAGGAAATAAACTTAATTTTAAAAAACAAAAAACTAAAAGTCAAATGGTTACCAACCGAGTCTACTTCTTTTAGTTTTCAAATTTTGATTTTCATTTTGAAAATGCTCCTAAAAAACGTCCTAGAGAACAAAATGCATAGAAACCAATAGACGAAAGTGATATTTATAGACTTAATTTTAAAAAACAGAAAATCAAAAACCAAACAATTACCAAATGGTTTGCTCAATAGTTCAAAAAAAGACCTTTTATGAAAGACTAACCTGATGGAGCTGTAGATCAAGTTCATCGATCATTAACTTCAATTCTTCTATTTGCTTAACATTACTTTGTTCTGAAACTCCAACAGCTTCAACAGTTGGGGATTTAGATGGCCTAACAATAATTATTGTACCCAATTTCCTTTCTTCTATGTTCTTGCTATTATTTTTTCCAAACTGAATAGAAAAAAAAAATGGTTTGAGTTATGAAATAAATATGAGAAGGAAAATAACAAATAAAAGTGGAAAGCTGCCAAGAACATTTACCAAGACAGTGGAAGTTATATCCTCAAGAGTTGTCTCAATGGGAACTATTGTGCTTTGGATTAAGAACTTGTCTTTGCATTTCATGTCAGATGGAGTAATACTTTGTGCTTTCATACTAACTACATTAACCATCACAAATATAAAAAATTGAGCTAAATTATTTATAAACATAGAAAAATTTTACTATCTATCAGCGATAGAATTCAATCGTGATCTATCGCTTTCTATTGCTCAAGCGATAGAATTCTATCGTGGTCTATCAGTGATAGACAGTGAAACTTTTCTATATTTGTAAATAGTTTAATATCTACTTATATAAGGCAATGATTAGACTACGCTTCTTTTCCTACAACTCCTTCATTTATCACATGATAAGAAAATAATAATTTAACTTTTTTAAAAAGTAAACAATTATTGCCACATGACAGTTTTTAATTGGATAACTAGTGAGCTATACAAAGATAGGTGTAGTCCAAGCAGCACCTAAATATTTTTCCTATATATATATATATATAAAATGTTGAATTTCATGTGCCCACCAAATTAAGTATTCAAACTTTCAATAAGTCTAGGCCAGAAAAAATTGTCCTAAGGTATTTCATAATGAACAATAGCAAAATTTTAAGTTTAGAGGTATTTGATAGCACACTAAATGTGCTTCCTAGGCTAAGGTTTTGGCTAGTTTTTGGATGAATTTCAATTCTTTCACAAGTTTATTTGTTTGATTTATAGGTCTATTTCAAGCATTTTGAGCACAATCGACGTTTTCAGGGAGAAAATTGAAAATTTAGAGATTTTAAGATATTAATTAAAAAGTTGTACCCAAAGTTTAAAATATCAATGTCGATGGAAGTATCGAGGTCTTAAATTTACCGATATTTCGATGGAAATATTAATTAAAAAGTTGTACCCAAGGTTTAAAATATCGATGTCGATGGAAATATCGAGGTCTTAATTTTACCAATATTTCGATGGAAATATTAATAAATTATCGATTTCGATGGATATTTCTGGAAAAATTATAAAAACAAAAAAAATTCAAAAATTAAATTTAAATTAAAAATAAACATTTTATTATTCTCAAATAAGTAAACAAATCTATTATTTATATTATATTTATATAAGTAGCATTTTGATGCTTATTTTTCGTGTTTCGTAGATTTTTTTACGATATAATGAAAATATCGATTCACCCCTCATATCGATATCGAACCTATGGAAAAATTTAATACTATGGTTGTACCTAGTGGTAGTGGGAATATACAAAAAAAGACCAATAGTCAAGGAGTCATGGGTTCAATCCAAATATTGTTAGGGTTAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAATTCACTTCTCTAAGGCACGTCTAGATAGTTTTAAGTTAAAATAACGGTTCTCTAGATAAAAATAAGGTAGAAGTAGGTTGTGATACTTAATAATTAACAGCTCAATCCCATGGATAATACTCAAATTCAATGAGTATATTAAAACTTGACAACATACACTTGCATGTTTGTATCATATAAAAATCACGGTTTTCTTTCATTTTCCTCCCATTTGTACTCATTTAAAAATAATATTTTAGAAGGATTAGGAAAAAAAAAAAAAAAAAAGGAAATTTAATTAAATGCAAGGAGTGCATACATTTGACTTCACAAGTGGATAATGGCTCGATGATGCCCATATTTGGTCCTACAAAGTATTTTTGAGGTTGTGTGGTCTTAACCTGAAAATGAAAAGAAAATTGTACTAGGTAGCAAAAATATATATATATAAGGGTATATTTGCAAATCTAGCAATGAAATAAGTTTGGGAGAATTTTAATTACTTACTCATAGAGCACCCTAGTGGCATATTACCTTTCGAACTAAAAGGAATGTGCATATTATTGATTATAACTTAAAATAAAGTAGGGTGGTTGATAGTTATAAGTCGTATAAATTTCTTCCGACTTTATAAAGACCAAAATAGGTTAGCTAGACTAGTAGATACGCTCGTGCGAGGGATGATTCTTTTTACACCTTAAATTATTGAAGCTGGAGTGTCATCCACTTGCCTGTTATTTGTTTATTTAGTTATGTGTTCTATTTTGCTCGGGACTAGCAAAAACTTAAATATGAAAGTATTTGATTGTACACAAGATGTGTTATATATCTCTAGACTTGGTCTTGAGATCAGGCGAACTAGTATAAACTTTCAGTGTTGTAATTCTCTTTTTCCTTTATCTTTATTATTTGTTTGTTTTCTGATCATTAACTTATTTGATTCTAACCTGTTAAGTGAGAGTGTAAAATATAATCTAGTTTATTACACTATTTATTTATATCTTGTTTAAATTTCCAACTATATTTGATTCATAAAATATTAGAAGAAATATATTAATATTTTCTTCTCAAATTTAAGTTTATTTTTCAAATATACTGACAGTTTTTCCTCAATATACTAATAGAAAAGATATTTTTAAATTTTCTTTTAAAATATAAAGGTATTGATATTTTTAAATTTTCTTTTAAAATATAAGGGTATTGATATGAAACTTTTAAAAGTTTCGGGGTATTTTTCCCAAAAGTACCAACGATTTCTATGAAAAGAATAAGGGTAAGTATGTTTTTAACGTCTTTTGAAAGTTTAAGGGTAGAATTTAATTTCAAAGGTACTTTTTAAGGTAATTGTAATGAGTAGCAATTTTAGGGATAATAACTAGGTGTATAGCAACATTTTTAAAAAATTACAATTATAGCAAAGTCTATCCGTGATAGACTTCTATCGCTACCATATGGGTCTATCAATGATAAAAGTCCACCGATAGACTTTGCTATATTTGCAATTTTTTAAAAATGTTGCTATATATGCTAATACTTTGAATTTGATTGCTATATTTGTAATTGTTTCTTTTTATATATATATAATTTTAGCTAAAATAAAAGGAAGAAAAGAACATAGATAGGGGATAGATAAACTCATACCTTAAAAGCCACATGGTTGATTGTTTTATTTGTAAGTTGAATTAAGCACAAGGCTTGTTTCTTTTCTTCAACTGCAAGCAATTAATTAAGGACATAATGAACAATTTGTTCTGTATTAGAACAAAAATATTAAGGATATTATTAAAATATTTAGATGTATATTTTAAATTAGCATTTGGTTAGGTGAAAAGTATACTTATTGTTAGACAACGCATATAAAGTTTCACATCAATTGAGATATTTCGATCTTTTAGACCGTTCCAAAAACAAAGCAAGTCAAAGTGGACAAGATATATCGAGAATGTTGCAAATAGATAATATACCTATAGAACTATCATGAGTTTGCTTAGTTGTAAATAGGGAGGCATGACCTTGATAAAGGGCTATCTACTTAGGATTTAATAGCCTACGAGTTTTCTTGACACCAAAATGTTATAAGGTCAGGCAGGTTGTCTCATGAGATTAGTTAAGGTATGCCTAAGCTAGTCCGGACACTCACGGATATAAAAATAATAATAATAATAAGATAATACCCATATATAAGCAACGTTTGTACCTTCACCTGCGATAGGCCTTACATGCGACCCTCATCTAATCTACCCTATAAAATGTTTTCCCTAAAGCTTGATAGCACATTTTTGGACTATGTTTGTAACTTATTTAATATTTATTGTCGATTTTAGTAATTTATGCAAAAATTACTATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTTACTGTCTATCAACGATAGACTACGATTGAATTCTATCGCGAGCTATTGCTGATAGACAGTAAAAAAATTTTATATTTGTAAACAACCCTAATTTATGGGCTATTTTCACCTACACCTCTTTTTCCTTTAAGAAAATATAGCAATTTTAGTTTAGCAAAAGATTTTAAGGATACCATCGAGAAATTCAAGTAATTTGAGCAAGAATGTGTGACATCTAAGGAATTCCCTAAGACAAACTAGACCCAAGACTTGAGGATAGAGTATTTATAGTGTTTTTAAAGCTAGCAAAGAACTAGCTTCGAATCGACAGTGTTAAGACGCTATCACATAATCAAAACTAATTGATGTTAGATCTAAAGCTTACATGATTTTAAAATCACTACAACCAAAACGGGTTTTCATGCTAAGATATCTTGCATATCATTGTTAAAAGAAGAGGATCTAAGGTATCATGCATGTCATTGAAACTAGATAGAAATATTGGTTTCCTAATTAGCAAATAGATTTAATTGTTCTTAGGAGAGATGCAATTATTATTAAATTGAACAATTGTGTATATGTGGTATTAAGTGGATTAGAAAATCGAACTTGAGGATGATACTTTTAGTGCATGTTTGAGAGTGATTTTGAAATTTGTTAAAAATAACTTTTGTCATGTTCAAAATCACTCTGAAACATATTTTTAATCACTTAAAATTAATTTAATATTTAACCTTACACTTTTAAATGTAATTTTCATATCATCAAAATTGATTTTGAATAATTAAAAATATGTTTCATAGTGATTTTGAAAATGTCAAAAGTGATTTTAACCATTTTAGAATCACTTAAATGCCAACCTATCACCTAACTATTTTTCTTAAGTAGCTTTATTTATTGTTATTAGATATTTGCCATTTATATGCGTAGTATTTTTTTTAATAATTTTTTTGGATATGTACTAAAGCGAGCATAGCTCAACAGGCATATGGATGTATTACGTTTGTGGTTCAAATTCTCATATCCTAAAACAAACAAACTTTTTCTTTGAATTCTTGGAAAGCTTGTTGCACGTTCCTGCCAATACTTGGCATACTACAAGAAATGGTCCCTGACTCTCAAACAAAGCAAGGGATTGAGCATGTAGCACGAAAGTTATTTTCGATGATAATACACCTTCCTCTTTCATTTTCTTTTCTAAATTAAAATTCCTCTTTCATTTTCTTTTCTAAATTAAAATTCAAAGCGTTAAAGCACTTTAGAAAAAATACAAGGCGTTGAGGCTTGACTAAGAGTCTCAATCGAAAGGGTTTTTTTAGCTTGCTCGGCTACAGTGGACCATTAGGTTAGCAGTTGGATGTCACGGTTTGTGGACCTAGAGGAATTAGCGTCGTGGAAAATAGTATCAAAGCCAAAGGTTCGACCAAGCCATGTCTAG

mRNA sequence

ATGGTTACGATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGGTTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGCTGAAATTGCCATTTCAAAGCTACAAGAGGAAAAAACTAGAATCCCAAAAGCCAAATCCTTGCAAAAGAATTGCTTACTTCGAAATAGCAACCCGAGCCTTTGGATGTCACGGTTTGTGGACCTAGAGGAATTAGCGTCGTGGAAAATAGTATCAAAGCCAAAGGTTCGACCAAGCCATGTCTAG

Coding sequence (CDS)

ATGGTTACGATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGGTTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGCTGAAATTGCCATTTCAAAGCTACAAGAGGAAAAAACTAGAATCCCAAAAGCCAAATCCTTGCAAAAGAATTGCTTACTTCGAAATAGCAACCCGAGCCTTTGGATGTCACGGTTTGTGGACCTAGAGGAATTAGCGTCGTGGAAAATAGTATCAAAGCCAAAGGTTCGACCAAGCCATGTCTAG

Protein sequence

MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKAKSLQKNCLLRNSNPSLWMSRFVDLEELASWKIVSKPKVRPSHV

Homology

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BLAST of Lsi06G001810 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.3e-12
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           V MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV 
Sbjct: 68  VIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS-MFSKAEGKHIEENKLRVTLVP 127

Query: 62  PSSSPTIEAL 72
           PS SP +  +
Sbjct: 128 PSDSPELSPI 136

[Close]

BLAST of Lsi06G001810 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           VT+QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + 
Sbjct: 72  VTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDE-LPQDTFTKDSGKTLTECKLKVSYIT 131

Query: 62  PSSS 66
           PS++
Sbjct: 132 PSTT 134

[Close]

BLAST of Lsi06G001810 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           VTMQAQK AP DM CKDKFL+Q+ +V   TT +++++  +F +   + IE+ KL ++ + 
Sbjct: 70  VTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAE-MFNKEAGRVIEDFKLRVVYIP 129

Query: 62  PS-SSPTIEALRVGVSEQSNDKQI--------EELKLKITQLDLKLHEAEIAISKLQEEK 114
            +  SP  E    G S  ++   I        +++     +   K  EA   ISKL EEK
Sbjct: 130 ANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEK 189

[Close]

BLAST of Lsi06G001810 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-06
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 1   MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILV 60
           +VTMQAQK AP D+ CKDKFL+Q  +     T +D +++ +F +     +EE KL ++ V
Sbjct: 67  LVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKD-VTHEMFSKEAGHRVEETKLRVVYV 126

Query: 61  RPSSSPTI--------EALRVGVSEQSNDKQIEEL-KLKITQLDLK--LHEAEIAISKLQ 113
            P   P+          + R  VS+  N        +    ++D +    EA   ++KL 
Sbjct: 127 APPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALVTKLT 186

[Close]

BLAST of Lsi06G001810 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 1   MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILV 60
           +VTMQAQK AP DM CKDKFL+Q  I     T +++    +F +     +EE KL +  V
Sbjct: 84  LVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPE-MFSKEAGHRVEETKLRVTYV 143

Query: 61  RP--SSSPTIEALRVGVSEQ---SNDKQIEELKLKITQLDLK------LHEAEIAISKLQ 113
            P    SP  E    G S +   S++    E   +   +D K        EA   I+KL 
Sbjct: 144 APPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALITKLT 203

[Close]

BLAST of Lsi06G001810 vs. ExPASy TrEMBL
Match: A0A1S3BPU6 (vesicle-associated protein 1-3-like OS=Cucumis melo OX=3656 GN=LOC103492223 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 95/129 (73.64%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIIL 62
           TMQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ IL
Sbjct: 69  TMQAQKMAPPDMKCKDKFLIQSTIVPIEANLHEDMTSTYNLFEKNGNKNNIEERKLSTIL 128

Query: 63  VRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKA 122
           V+ S +S TIEAL VGVS QS DKQIEELKLKITQLD KLHEAEI+ISKL+EEK RI K 
Sbjct: 129 VKASAASSTIEALSVGVSNQSKDKQIEELKLKITQLDQKLHEAEISISKLEEEKARIQKM 188

Query: 123 KSLQKNCLL 128
           KS QKNCL+
Sbjct: 189 KSQQKNCLV 197

[Close]

BLAST of Lsi06G001810 vs. ExPASy TrEMBL
Match: A0A6J1HZ48 (vesicle-associated protein 2-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467925 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 73/123 (59.35%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRP 62
           T QAQ +AP DM+CKDKFLIQST+VPIET ++DI S  +FG++ SKNIEE KL  I+V P
Sbjct: 69  TRQAQSVAPLDMVCKDKFLIQSTVVPIETNVDDITSTTMFGKSGSKNIEETKLNTIIVSP 128

Query: 63  SSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKAKSLQ 122
           +  P  + + + V +QSND+Q+EELKLKIT+L++KLHEA +AISKL++E+   PKAKS +
Sbjct: 129 NVEPLRKEMAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAISKLEQERPSNPKAKSFK 188

Query: 123 KNC 126
            NC
Sbjct: 189 NNC 191

[Close]

BLAST of Lsi06G001810 vs. ExPASy TrEMBL
Match: A0A6J1HCB9 (vesicle-associated protein 2-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462044 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 9.0e-31
Identity = 73/123 (59.35%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRP 62
           TMQAQ +AP DM+CKDKFLIQST+VP ETT++DI S  +FG++ SKNIEE KL  I+V P
Sbjct: 69  TMQAQSVAPLDMVCKDKFLIQSTVVPTETTVDDITSTTMFGKSGSKNIEETKLNTIIVIP 128

Query: 63  SSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKAKSLQ 122
           +  P  + + + V +QSND+Q+EELKLKIT+L++KLHEA +AISKL++E+    KAKS +
Sbjct: 129 NVEPLRKEVAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAISKLEQERPSNLKAKSFK 188

Query: 123 KNC 126
            NC
Sbjct: 189 NNC 191

[Close]

BLAST of Lsi06G001810 vs. ExPASy TrEMBL
Match: A0A6J1DM49 (vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC111021835 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.6e-30
Identity = 81/133 (60.90%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRP 62
           TMQ Q +APPDMICKDKFLI STIVP ETT+EDI S+ LFG++  K IE+KKL   LVR 
Sbjct: 69  TMQGQGVAPPDMICKDKFLILSTIVPAETTVEDITSSNLFGEDERKYIEKKKLIPTLVRA 128

Query: 63  SS-SPTIEALR-----VGVSEQSN--DKQIEELKLKITQLDLKLHEAEIAISKLQEEKTR 122
           S+ SP  EAL      +GVS+  +  DK +E+LKL IT+L+LKLHEA+ AI KL+EE+TR
Sbjct: 129 SNYSPYYEALNNEVMALGVSDHPSNYDKYVEKLKLNITELELKLHEAQDAICKLEEERTR 188

Query: 123 IPKAKSLQKNCLL 128
           I + KSL+KNCL+
Sbjct: 189 IQRKKSLEKNCLV 201

[Close]

BLAST of Lsi06G001810 vs. ExPASy TrEMBL
Match: A0A0A0LWK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573570 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.3e-25
Identity = 73/106 (68.87%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 4   MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIIL 63
           MQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ IL
Sbjct: 1   MQAQQMAPPDMKCKDKFLIQSTIVPIETNLHEDYVTSTYNLFEKNGSKNNIEERRLSTIL 60

Query: 64  VR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIA 105
           V+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KLHE  ++
Sbjct: 61  VKDESSSPTIETLNVGVSNQSKDKEIEELKLKITQLDQKLHEVSLS 106

[Close]

BLAST of Lsi06G001810 vs. NCBI nr
Match: XP_038878617.1 (LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida])

HSP 1 Score: 171.0 bits (432), Expect = 8.3e-39
Identity = 94/127 (74.02%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           VTMQAQK+APPDM CKDKFLIQSTIVPIETT EDI S  LFG++NSKNIEE+ L  ILV 
Sbjct: 68  VTMQAQKMAPPDMKCKDKFLIQSTIVPIETTAEDITSTNLFGKDNSKNIEERILTTILVS 127

Query: 62  PSSSPTIEALRVGVS-EQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKAKS 121
           PSSS T+EAL VGVS + S+DKQIEELKLKI +LD KLHEAEIAISKL+ +K  + K KS
Sbjct: 128 PSSSLTVEALSVGVSNKSSSDKQIEELKLKINELDQKLHEAEIAISKLEGKKNXVQKTKS 187

Query: 122 LQKNCLL 128
            QKNCL+
Sbjct: 188 QQKNCLV 194

[Close]

BLAST of Lsi06G001810 vs. NCBI nr
Match: XP_031736065.1 (vesicle-associated protein 2-1-like [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35
Identity = 92/131 (70.23%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAI 61
           +TMQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ 
Sbjct: 68  ITMQAQQMAPPDMKCKDKFLIQSTIVPIETNLHEDYVTSTYNLFEKNGSKNNIEERRLST 127

Query: 62  ILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIP 121
           ILV+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KLHEAEI+ISKL+EE+ RI 
Sbjct: 128 ILVKDESSSPTIETLNVGVSNQSKDKEIEELKLKITQLDQKLHEAEISISKLEEERARIQ 187

Query: 122 KAKSLQKNCLL 128
           K K  QKNCL+
Sbjct: 188 KVKFQQKNCLV 198

[Close]

BLAST of Lsi06G001810 vs. NCBI nr
Match: XP_008450732.1 (PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35
Identity = 95/129 (73.64%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIIL 62
           TMQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ IL
Sbjct: 69  TMQAQKMAPPDMKCKDKFLIQSTIVPIEANLHEDMTSTYNLFEKNGNKNNIEERKLSTIL 128

Query: 63  VRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKA 122
           V+ S +S TIEAL VGVS QS DKQIEELKLKITQLD KLHEAEI+ISKL+EEK RI K 
Sbjct: 129 VKASAASSTIEALSVGVSNQSKDKQIEELKLKITQLDQKLHEAEISISKLEEEKARIQKM 188

Query: 123 KSLQKNCLL 128
           KS QKNCL+
Sbjct: 189 KSQQKNCLV 197

[Close]

BLAST of Lsi06G001810 vs. NCBI nr
Match: XP_031736025.1 (vesicle-associated protein 1-3-like [Cucumis sativus] >KGN66550.2 hypothetical protein Csa_006961 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 3.6e-34
Identity = 89/128 (69.53%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQNNSKNIEEKKLAIILV 62
           TMQAQK+APPDM CKDKFLIQSTIVP E  L ED+ S   LF +N SKNIEE++L  ILV
Sbjct: 69  TMQAQKMAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILV 128

Query: 63  R-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKAK 122
           +  S+SPTIE LRV VS QS D +IEELKLKIT+LD KLHEAEI+ISKL+E+K RI K K
Sbjct: 129 KAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISISKLEEDKARIRKFK 188

Query: 123 SLQKNCLL 128
           S QKNC++
Sbjct: 189 SQQKNCMV 196

[Close]

BLAST of Lsi06G001810 vs. NCBI nr
Match: XP_022968793.1 (vesicle-associated protein 2-2-like [Cucurbita maxima])

HSP 1 Score: 146.0 bits (367), Expect = 2.9e-31
Identity = 73/123 (59.35%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 3   TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRP 62
           T QAQ +AP DM+CKDKFLIQST+VPIET ++DI S  +FG++ SKNIEE KL  I+V P
Sbjct: 69  TRQAQSVAPLDMVCKDKFLIQSTVVPIETNVDDITSTTMFGKSGSKNIEETKLNTIIVSP 128

Query: 63  SSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQEEKTRIPKAKSLQ 122
           +  P  + + + V +QSND+Q+EELKLKIT+L++KLHEA +AISKL++E+   PKAKS +
Sbjct: 129 NVEPLRKEMAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAISKLEQERPSNPKAKSFK 188

Query: 123 KNC 126
            NC
Sbjct: 189 NNC 191

[Close]

BLAST of Lsi06G001810 vs. TAIR 10
Match: AT1G08820.1 (vamp/synaptobrevin-associated protein 27-2 )

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           V MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV 
Sbjct: 68  VIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS-MFSKAEGKHIEENKLRVTLVP 127

Query: 62  PSSSPTIEAL 72
           PS SP +  +
Sbjct: 128 PSDSPELSPI 136

[Close]

BLAST of Lsi06G001810 vs. TAIR 10
Match: AT1G08820.2 (vamp/synaptobrevin-associated protein 27-2 )

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           V MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV 
Sbjct: 68  VIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS-MFSKAEGKHIEENKLRVTLVP 127

Query: 62  PSSSPTIEAL 72
           PS SP +  +
Sbjct: 128 PSDSPELSPI 136

[Close]

BLAST of Lsi06G001810 vs. TAIR 10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-09
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           VT+QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + 
Sbjct: 72  VTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDE-LPQDTFTKDSGKTLTECKLKVSYIT 131

Query: 62  PSSS 66
           PS++
Sbjct: 132 PSTT 134

[Close]

BLAST of Lsi06G001810 vs. TAIR 10
Match: AT5G47180.2 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-09
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           VT+QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + 
Sbjct: 72  VTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDE-LPQDTFTKDSGKTLTECKLKVSYIT 131

Query: 62  PSSS 66
           PS++
Sbjct: 132 PSTT 134

[Close]

BLAST of Lsi06G001810 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 2   VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVR 61
           VTMQAQK AP DM CKDKFL+Q+ +V   TT +++++  +F +   + IE+ KL ++ + 
Sbjct: 70  VTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAE-MFNKEAGRVIEDFKLRVVYIP 129

Query: 62  PS-SSPTIEALRVGVSEQSNDKQI--------EELKLKITQLDLKLHEAEIAISKLQEEK 114
            +  SP  E    G S  ++   I        +++     +   K  EA   ISKL EEK
Sbjct: 130 ANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEK 189

The following BLAST results are available for this feature:

BLAST of Lsi06G001810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DHD7	5.3e-12	55.71	Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=...	[more]
Q9LVU1	1.0e-07	45.31	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]
Q84WW5	1.7e-07	35.54	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SHC8	4.3e-06	31.71	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	1.3e-05	35.77	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]

BLAST of Lsi06G001810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPU6	1.6e-35	73.64	vesicle-associated protein 1-3-like OS=Cucumis melo OX=3656 GN=LOC103492223 PE=4...	[more]
A0A6J1HZ48	1.4e-31	59.35	vesicle-associated protein 2-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467925 ...	[more]
A0A6J1HCB9	9.0e-31	59.35	vesicle-associated protein 2-2-like OS=Cucurbita moschata OX=3662 GN=LOC11146204...	[more]
A0A6J1DM49	7.6e-30	60.90	vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC1110218...	[more]
A0A0A0LWK4	4.3e-25	68.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573570 PE=4 SV=1	[more]

BLAST of Lsi06G001810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878617.1	8.3e-39	74.02	LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]	[more]
XP_031736065.1	3.3e-35	70.23	vesicle-associated protein 2-1-like [Cucumis sativus]	[more]
XP_008450732.1	3.3e-35	73.64	PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]	[more]
XP_031736025.1	3.6e-34	69.53	vesicle-associated protein 1-3-like [Cucumis sativus] >KGN66550.2 hypothetical p...	[more]
XP_022968793.1	2.9e-31	59.35	vesicle-associated protein 2-2-like [Cucurbita maxima]	[more]

BLAST of Lsi06G001810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08820.1	3.7e-13	55.71	vamp/synaptobrevin-associated protein 27-2	[more]
AT1G08820.2	3.7e-13	55.71	vamp/synaptobrevin-associated protein 27-2	[more]
AT5G47180.1	7.3e-09	45.31	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT5G47180.2	7.3e-09	45.31	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT4G00170.1	1.2e-08	35.54	Plant VAMP (vesicle-associated membrane protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..111
None	No IPR available	PANTHER	PTHR10809:SF105	VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED	coord: 77..124 coord: 1..68
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 1..64 e-value: 4.9E-8 score: 34.9
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 77..124 coord: 1..68
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 2..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001810.1	Lsi06G001810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane