Lsi06G001450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G001450
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like protein 21
Locationchr06: 1512079 .. 1517001 (+)
RNA-Seq ExpressionLsi06G001450
SyntenyLsi06G001450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTGAATACAAGTGCTCAATTATGCTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTCTGTAAACAAGTTGGGAATGGTCATGTTTGCCATTGCTATTGTTGATTTCATGTTATTATTTCCTTTTCAACCTTTATTTCCATGTATACAATGCATGACATTGCTTTTTAATAACGATGATTTTAATAATAAATAATCATTAATATAATAAGAAACAAGGAGTCAACCCTATATATCTTCATCTATACGAATATGAATTTTAAGGGAGTGAAAGAGTTACACCAAGAAATCAATTGTACTTGATAGTAAAGAATCTGCAAGTCAAAGTTAAAATTGAAGTAATTTTCTTTCCTAATGATTCAATAAAATATGTGGGTTGAAGAATTTGAACTTCTAATCTTTTAGTTGAGAGTATACTCATGTTTACAAAATTTTCAGTTACTTTCACATGCATGAATTTGACCATTTATAGTTTGCAATAAAAATTAAATCAAAATGAGATCATATTCTATGACGACACAACATTAACTAGTTAAGAATAATACATCGTATTCAGGTCAAATCTAGTTCAAATTTTTAGGTAATTACTATGATATGCATAAATATAACCATATATAACTTGTCATAAAAATGGCACAATAAATGAAAATGAAGGTATAATCACTATCAAAATATATAATAACCATTGCATTAAATTTTAAACTGAAACTTTAGGTCAAATTCTAAACATCCAAGTTTTATGCATAAAAACTTTTAAAGGAAACTGTTCTCATTTATTACAAAAAAAAAAAAAAAAACAATCGGCTTCATCCATTGTACGAGTTTTCCCTATAAAAACAGATCATTTTCCTTTGGCAAATGCATTATACATTCCAGCCAATTTGTACAACAAAGTTAAAAGCAATGGCAAAATTAGGAGCAACCTCTACTTTGATTCTAATAATCTTCCTCGTCTTATATTCAGGTATACCTTCTCTTTATAGATTTAGTTTGTAATAATTTTTTAAATAGTAACTTTAGTTGAAGTAATTTTTATTCTTTAAAACGTTAAAAATAGTTCATGCATGTATTTGGGAGTTATTTTTGTCATGATTCAAGAAGTATATACATATTTACTACTCTAGAACTCATATAGTGTTCCTCCTCGTTATTTTTAGAAGCTTTAAAAGCACTTCTGTCTAAATATTGGAATACTTTTGAATTTGATATTTGGTGCTCCGATTTTGACTCTAGGGTTTAGAGAAGTGCACTAAGTAATCTGACTTTTCTCTCTAGAAAATTGCTCTCTCCCTCTGCTCGTGAACATACTTAATATACTATGTTAGTGAACCATGTAAATATGTTTGTCAATTCTTTATTCCTATACGTTTTCTGTTTATCTTTATTTGTCGATTTGTTAACATTAACTAACCAAACCCCATAAAAATTTATTAAACTTCACATTTTACACTCGCTTCAGACTCATGTTAATAGTACTTTCAATACTGCTTGAAGTGTTTAATTTCTTATTGAAAATTAATGGGTCGAATTACAGGAAGTTTGAATACAAGTGCTCAATTGTGCTGCAACAACCATCCTCAACTAGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTTTGCAAACAAGTTGGGAGTGGCCACGTTTGTCATTGCTATTGTTGATTTCGTGTCATTATTTCCTTTTCAACATCTATTTTCATGTATGCAATGTCATGCATTGCTCTTCAATAACGATAATTTTAATAATAAAAATCATTATCAAGTTTGAATAAAGCTCATTTATTCCAACAAAATATAAAGTATATACTATACATCCTGATTATTAAAAGGGCTTCTAGAGCCTCAACAACAATTTTGAGTCTTACAACAAAGGATAGTAGAGCATCTCTCACTCACCACCCACACATTTAGGGAAAAAAGAACCTTAACTTTACATACAATTGTCATAGAATAAAGAAATATTATTAAAGACTAAAGGTAAAATGTTGAGGTGAATCACACATCAACAGCCAACTGGATAAGACAATAGTACTTTGACTGTCACCTAAGAAGCACGGACACGATAAACAATAGGATATCGCGATACACTAATTTTAAAAAAAAAACTAGGACATAGACATGTTAAGGATACATTTTATTATTATTATTTTTAATGTATATATAAATTTAACATAAAATACTAAATGCACTCCACTAAAAAAACCGTAAATGTCAAGTTAATTAACAATTATAGGAGATGAAACATTTAAGTTTCTAACTTTAGTTTTTTATGTTTATGTTTTTCTATCTTTTGTTAAAAAATGGGGTTTTCTTTTATTTTAATTTTTTTTATCTTAGCTTAACATATAATTAATTTGGGCTTTAAATTTGGGTCCAACGTGAAAGATTGGATCATTTTCTCTTTTAAAAACAAACTCCTAACGTGTCTAGGAAGTGTCCAAAACGTGTCCCTACGTGTCTGAAATTAAAAATAAATAAATAGGACATATAAATTTGTATGTTTAGAGCGTGCATGAAACATCGGATTAACAGCAAGGGCATTTGTACACCAAGATTTTCACACCCAAGGATGGGGTAACAACTAAAGGAAAACCAAGTTCATATAAAATGTTTCGAATCCAAGTAACTTTCAGTAGTGGTGTGGACAAGAGGCTCGATACTCTAAAATTTTCATATTTGAGCGAGCAACAACAACTACCTATTTCTTAAAGGACTACAAAATCAAAGACATGCCAAGAAAAATAGAGTATGAGGTGGCAGATTTTCAATCATCAACGTTGTCTTAAAAAGGTCGTAAGAGTTAACAAATCACTTTGTTGAATGAGAAGCCCATAGGATTTTAATTAATATGATTACTCATACTTAAATTTCTATTTTTATATTTTTTAGATGAACATACTCTCTAGATGCAATAGTCTACAATTGGTGCAATTGTTTGAAAATTAGTAAAAAAAAAAAAGAAAAAAAATCCTAATAATTCAATCAAATATATGGGTTGAAGGATTGGACATCTTATCTTTTAGTCAAGAATGTATTCATGTTGATAAAATTTTCAATTATTTTAAGATGCATGAATATGACCATTTATAACTTGCAATAAAAATTAAATCGAAACTGAAAGAGAAATGAAACTATAGCTATAAGACAACATTAACTATTTAAGAATCATACATCGAATTTAGGTCAAACCTATTTCAAATTTTTAGATAATTATTATGATGTGCATAAATATGATATAACTTGCAATAAAAATGACAATCGAAATGAAAATGAATGTATAACCTCTAAAAAAATATTAACCATTGTTTAATGCATGAAAACTTTTAAAGGAAACTGTTCTCATTTATTGTAAAATGTGTACTTTCATACATTGCACGAATTTTCCTATAAAAACAAAATCATATTCCTTTGCAATTGCATTATACATTCCAAACAATTTTTATAACAAATTCGAAAGAAATGGCTAAACTAGGAGCCATTTCTACTTGGATCCTTATAACTTTCTCATCTTATATTCAGGTCTAACTTCTCTTATAATTTTAGTTTGTAAATATTTTTAAATATTTTTCTTTTAAATGTAATAAAAATAGTCCATGTTTGGGAATTATTTTTGTAGTGATTCCATTCAAAACCATCATGTTTAGAATTAATGCAAAAATATGTTCTTCATAAATCAAAAGCAAGTGGTTTATGAGAAAAAGAACATGAAGATCATGAAAACTACTTTCTATATTATTGGAAATACATTTCACCATTCTAGTACTCATATAGTGTTCCTCCACATTATTTTTAAAAGCACTCCTACCTAACTAACTCAAACTCCATAAAAATTTATTAAATTTCACTGTTTACGCTCGCTTCAAAGTTATGTTAATAGTACTTTAAAAGCGGTTTGAACTGTTTGATTTTTTATTACAAATTGCTGGCTCGACTTATAGGTAGTTTGAATGCAAGTGCTCAATTGTGCTGCAACAACCATCCTCAACTTGGTGCTTGCAAGCCTAGAGTAGATGATCAGGGAGATGGAAAGTGTTGGATTCATTGTATGTCTGGCTGTGATAAGGAGGATTTTGCAAACAAGTTGGGAGTGGCCATGTTTGTCATTGGTATTGTTGATTTCGTGTTATTATTTTCCTTTTCAACCTTTGTTTTCATTTATGCAATGTCATGCATTGTTCTTCAATAACCATGATTTTAATAATAAATAAATCATTAATATAATCATAAACAAAGAGTCAATCCTATCTTTGCGTATATGAATATGAATTTTAAGGAGGTAAAAGAGTTGCACCAAGAAATCAATAGTGAGGAGTATGTCTGGCCTCTCCTCTTTTAAATTTTTGTATTCTTCATTTGAGAGAAATTCAATAAACAAGCCATCTAAATTGATTTAAATTGGTCATGAATATATCGAATGAGAATTAAATTTCAAAATTAAATGAAAGCTAAATATAAAAAAAAATTTGAGGGGAAAAAAAAACTCAAACTTGAAGTTTGGGACGTTACATTGAGCTTGGTTGTTTTTGGTATAATAGAATTTCTTTATATGGTTGTTGAAATAATCATAATGTTAGAGTTGCTTCTTTTTTTTTCTTCTTTTTTGATATTCGTGAGTGTCCGGGCCAACTTACGTGCACCTCGATTAATCTCATGGGACAAATATTGATTATCTCTCCTTTTTTACCACTAGATCAAACCCATGATGGTTTGCTTGTTTATCATCTTCTACAACAGGTTTTTTGCCTCAAGACTTTGCATGACATGCACCTCACGACGTTATTTGTTATACATTGTATCCCC

mRNA sequence

AGTTTGAATACAAGTGCTCAATTATGCTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTCTGTAAACAAGTTGGGAATGGAAGTTTGAATACAAGTGCTCAATTGTGCTGCAACAACCATCCTCAACTAGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTTTGCAAACAAGTTGGGAGTGGCCACGTTTTTTGCCTCAAGACTTTGCATGACATGCACCTCACGACGTTATTTGTTATACATTGTATCCCC

Coding sequence (CDS)

AGTTTGAATACAAGTGCTCAATTATGCTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTCTGTAAACAAGTTGGGAATGGAAGTTTGAATACAAGTGCTCAATTGTGCTGCAACAACCATCCTCAACTAGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTTTGCAAACAAGTTGGGAGTGGCCACGTTTTTTGCCTCAAGACTTTGCATGACATGCACCTCACGACGTTATTTGTTATACATTGTATCCCC

Protein sequence

SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHVFCLKTLHDMHLTTLFVIHCIP
Homology
[Close]
BLAST of Lsi06G001450 vs. ExPASy Swiss-Prot
Match: Q2V2S1 (Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.7e-11
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 59  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H+
Sbjct: 36  ICCKEHPSVGRCLPGIDDDAEKDGKCWKFCIEGCETGGFCKLFEHKHI 83

[Close]
BLAST of Lsi06G001450 vs. ExPASy Swiss-Prot
Match: P0CAX9 (Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0 

Query: 59  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHV 105
           +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H+
Sbjct: 40  ICCKEHPSVGRCLPNIDDSAEKGGKCWKFCIEGCETGGFCKLFGHKHI 87

[Close]
BLAST of Lsi06G001450 vs. ExPASy Swiss-Prot
Match: Q2V391 (Defensin-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=At5g08315 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-07
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0 

Query: 52  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG---HVFC 107
           ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G   H +C
Sbjct: 26  NVENGGSLCCNNHPKFGKCNTKNDDQ---RCNSWCLNGCDNGKGGYCKSMSHGGQCHCYC 82

[Close]
BLAST of Lsi06G001450 vs. ExPASy Swiss-Prot
Match: Q2V392 (Putative defensin-like protein 25 OS=Arabidopsis thaliana OX=3702 GN=At5g08055 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = 0 

Query: 44  FCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGS 103
           F   V   ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  
Sbjct: 17  FSVDVEGYNVESGGSLCCNNHPKFGKCNTNNDNQ---RCNRWCHNGCGNGKGDYCKAMSH 76

Query: 104 G---HVFC 107
           G   H +C
Sbjct: 77  GGLCHCYC 81

[Close]
BLAST of Lsi06G001450 vs. ExPASy TrEMBL
Match: A0A5D3CEJ1 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003360 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.7e-34
Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 0 

Query: 1   SLN-TSAQLCCNNHPQLGACKPGVDDQ--GDGKCWTHCISGCEKGGFCKQVGNGSLNTSA 60
           SLN  +AQ+CCNNHP LG CKPGVDD   G+GKCW+ CISG  K            NT+A
Sbjct: 32  SLNANAAQMCCNNHPSLGRCKPGVDDSPGGNGKCWSFCISGWSK------------NTNA 91

Query: 61  QLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           QLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ + +V
Sbjct: 92  QLCCNNHPELGSCEPGVDDASDGKCWLHCIAGCEKGGFCKQLSNKNV 126

[Close]
BLAST of Lsi06G001450 vs. ExPASy TrEMBL
Match: A0A5B6WTE5 (Defensin-like protein 21 OS=Gossypium australe OX=47621 GN=EPI10_007198 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.8e-21
Identity = 56/131 (42.75%), Postives = 70/131 (53.44%), Query Frame = 0 

Query: 9   CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFC-KQVGNGS------------L 68
           CCNNHP+LG C PG DD    DGKCW +CI+ CE+G    KQ+   S            +
Sbjct: 55  CCNNHPELGKCIPGEDDNPDKDGKCWNYCIADCERGVTADKQIYMDSPIIDRHSPFYDDI 114

Query: 69  NTSAQL----------------CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGF 107
           N++  +                CCNNHP+LG C PG DD    DGKCW +CI+ CE+GG 
Sbjct: 115 NSAGPMHVEGGEPMAKSDAKSKCCNNHPELGKCIPGEDDNPDKDGKCWNYCIADCERGGV 174

[Close]
BLAST of Lsi06G001450 vs. ExPASy TrEMBL
Match: A0A5D3CFQ3 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003350 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 50  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           +GS NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+   +V
Sbjct: 20  SGSKNTNAQLCCNNHPELGSCEPGVDDASDGKCWLHCIAGCEKGGFCKQLTDKNV 74

[Close]
BLAST of Lsi06G001450 vs. ExPASy TrEMBL
Match: A0A0A0LWJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573030 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 51  GSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           GS+NT+AQLCCNNH +LG+C PGVDD  DGKCW HCI GCE+GGFCK++  GHV
Sbjct: 21  GSMNTNAQLCCNNHRELGSCVPGVDDDYDGKCWHHCIVGCERGGFCKKLWYGHV 74

[Close]
BLAST of Lsi06G001450 vs. ExPASy TrEMBL
Match: A0A0A0M1N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573060 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 50  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           +GS+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +   +V
Sbjct: 20  SGSMNTNAQLCCNNHPELGECEAGVDDANDGKCWLHCIAGCEKGGFCKHLSDKNV 74

[Close]
BLAST of Lsi06G001450 vs. NCBI nr
Match: TYK10191.1 (putative defensin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 0 

Query: 1   SLN-TSAQLCCNNHPQLGACKPGVDDQ--GDGKCWTHCISGCEKGGFCKQVGNGSLNTSA 60
           SLN  +AQ+CCNNHP LG CKPGVDD   G+GKCW+ CISG  K            NT+A
Sbjct: 32  SLNANAAQMCCNNHPSLGRCKPGVDDSPGGNGKCWSFCISGWSK------------NTNA 91

Query: 61  QLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           QLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ + +V
Sbjct: 92  QLCCNNHPELGSCEPGVDDASDGKCWLHCIAGCEKGGFCKQLSNKNV 126

[Close]
BLAST of Lsi06G001450 vs. NCBI nr
Match: KAE8653392.1 (hypothetical protein Csa_007412 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 9.0e-33
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 1   SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLC 60
           SLNT+AQLCC NHP+ GACKPGVDD  DG+CW  CI GCEK         G+LN +A +C
Sbjct: 22  SLNTNAQLCCINHPEWGACKPGVDDATDGRCWLKCIGGCEK---------GNLNANAAVC 81

Query: 61  CNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSG-----HVFC 107
           CNN+P LG+CKPGVDD  Q +GKCW  C SGC KGGFCK+VG       H +C
Sbjct: 82  CNNNPSLGSCKPGVDDSPQANGKCWRLCTSGCTKGGFCKRVGRNGRHVCHCYC 125

[Close]
BLAST of Lsi06G001450 vs. NCBI nr
Match: KAA3485179.1 (defensin-like protein 21 [Gossypium australe])

HSP 1 Score: 110.9 bits (276), Expect = 7.9e-21
Identity = 56/131 (42.75%), Postives = 70/131 (53.44%), Query Frame = 0 

Query: 9   CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFC-KQVGNGS------------L 68
           CCNNHP+LG C PG DD    DGKCW +CI+ CE+G    KQ+   S            +
Sbjct: 55  CCNNHPELGKCIPGEDDNPDKDGKCWNYCIADCERGVTADKQIYMDSPIIDRHSPFYDDI 114

Query: 69  NTSAQL----------------CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGF 107
           N++  +                CCNNHP+LG C PG DD    DGKCW +CI+ CE+GG 
Sbjct: 115 NSAGPMHVEGGEPMAKSDAKSKCCNNHPELGKCIPGEDDNPDKDGKCWNYCIADCERGGV 174

[Close]
BLAST of Lsi06G001450 vs. NCBI nr
Match: KAF9837361.1 (hypothetical protein H0E87_001137 [Populus deltoides])

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0 

Query: 3   NTSAQ-LCCNNHPQLGACKPGVDDQG-DGKCWTHCISGCEKGGFCKQVGNGSLNTSAQ-L 62
           N +AQ  CC  HP+LG C+PGVDD+  DGKCW +C++ C+     +  G+   N +AQ  
Sbjct: 25  NVAAQSQCCTEHPELGKCQPGVDDKSPDGKCWQYCMNNCD-----ENKGDYKNNVAAQSQ 84

Query: 63  CCNNHPQLGACKPGVDDQG-DGKCWTHCISGCE--KGG 95
           CC  HP+LG C+PGVDD+  DGKCW +C++ C+  KGG
Sbjct: 85  CCTEHPELGKCQPGVDDKSPDGKCWQYCMNNCDENKGG 117

[Close]
BLAST of Lsi06G001450 vs. NCBI nr
Match: TYK10190.1 (putative defensin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 4.8e-18
Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 50  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           +GS NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+   +V
Sbjct: 20  SGSKNTNAQLCCNNHPELGSCEPGVDDASDGKCWLHCIAGCEKGGFCKQLTDKNV 74

[Close]
BLAST of Lsi06G001450 vs. TAIR 10
Match: AT5G52605.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 5.5e-12
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 59  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHV 105
           +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H+
Sbjct: 36  ICCKEHPSVGRCLPGIDDDAEKDGKCWKFCIEGCETGGFCKLFEHKHI 83

[Close]
BLAST of Lsi06G001450 vs. TAIR 10
Match: AT4G14276.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 67.4 bits (163), Expect = 9.3e-12
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0 

Query: 59  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHV 105
           +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H+
Sbjct: 40  ICCKEHPSVGRCLPNIDDSAEKGGKCWKFCIEGCETGGFCKLFGHKHI 87

[Close]
BLAST of Lsi06G001450 vs. TAIR 10
Match: AT5G08315.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.8e-08
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0 

Query: 52  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG---HVFC 107
           ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G   H +C
Sbjct: 26  NVENGGSLCCNNHPKFGKCNTKNDDQ---RCNSWCLNGCDNGKGGYCKSMSHGGQCHCYC 82

[Close]
BLAST of Lsi06G001450 vs. TAIR 10
Match: AT5G08055.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 7.6e-06
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = 0 

Query: 44  FCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGS 103
           F   V   ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  
Sbjct: 17  FSVDVEGYNVESGGSLCCNNHPKFGKCNTNNDNQ---RCNRWCHNGCGNGKGDYCKAMSH 76

Query: 104 G---HVFC 107
           G   H +C
Sbjct: 77  GGLCHCYC 81

The following BLAST results are available for this feature:
BLAST of Lsi06G001450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2V2S17.7e-1154.17Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 P... [more]
P0CAX91.3e-1052.08Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1[more]
Q2V3916.7e-0740.00Defensin-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=At5g08315 PE=2 SV=1[more]
Q2V3921.1e-0435.29Putative defensin-like protein 25 OS=Arabidopsis thaliana OX=3702 GN=At5g08055 P... [more]
BLAST of Lsi06G001450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CEJ16.7e-3463.55Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5B6WTE53.8e-2142.75Defensin-like protein 21 OS=Gossypium australe OX=47621 GN=EPI10_007198 PE=3 SV=... [more]
A0A5D3CFQ32.3e-1872.73Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0LWJ92.6e-1772.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573030 PE=3 SV=1[more]
A0A0A0M1N02.6e-1769.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573060 PE=3 SV=1[more]
BLAST of Lsi06G001450 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10191.11.4e-3363.55putative defensin-like protein 20 [Cucumis melo var. makuwa][more]
KAE8653392.19.0e-3360.18hypothetical protein Csa_007412 [Cucumis sativus][more]
KAA3485179.17.9e-2142.75defensin-like protein 21 [Gossypium australe][more]
KAF9837361.11.6e-1848.98hypothetical protein H0E87_001137 [Populus deltoides][more]
TYK10190.14.8e-1872.73putative defensin-like protein 20 [Cucumis melo var. makuwa][more]
BLAST of Lsi06G001450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52605.15.5e-1254.17Defensin-like (DEFL) family protein [more]
AT4G14276.19.3e-1252.08Defensin-like (DEFL) family protein [more]
AT5G08315.14.8e-0840.00Defensin-like (DEFL) family protein [more]
AT5G08055.17.6e-0635.29Defensin-like (DEFL) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022618Defensin-like protein 20-27PFAMPF10868Defensin_likecoord: 8..50
e-value: 8.7E-11
score: 42.4
coord: 59..106
e-value: 2.4E-11
score: 44.2
IPR022618Defensin-like protein 20-27PANTHERPTHR34453DEFENSIN-LIKE (DEFL) FAMILY PROTEIN-RELATEDcoord: 4..50
coord: 54..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G001450.1Lsi06G001450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050832 defense response to fungus
cellular_component GO:0005576 extracellular region