Lsi06G000630 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCCTCAACAACATAAAAAGCCTCAAAATTTCCAATTCCCACATTATCATCAAACAACGACGGGCGATGGAGATGGGGCGACGATACTCGGGAGTGGCGAGTTGCCGGAGCTCCGGTGGGATTGGGAACATGGGATTGGAAACGATTAAAGAAATCAGATCTCGGAAGGAACGAGTGGTTGAGGCAACGAAATCGTCAAAGAAATCATTGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGACGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAACTTAAGAATTCCATTAACAAAGGCTTCAAATGGATGAAGAACAAATGTGCTAAAATCATCTCTGGATTTTAA ATGGATTCCCTCAACAACATAAAAAGCCTCAAAATTTCCAATTCCCACATTATCATCAAACAACGACGGGCGATGGAGATGGGGCGACGATACTCGGGAGTGGCGAGTTGCCGGAGCTCCGGTGGGATTGGGAACATGGGATTGGAAACGATTAAAGAAATCAGATCTCGGAAGGAACGAGTGGTTGAGGCAACGAAATCGTCAAAGAAATCATTGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGACGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAACTTAAGAATTCCATTAACAAAGGCTTCAAATGGATGAAGAACAAATGTGCTAAAATCATCTCTGGATTTTAA ATGGATTCCCTCAACAACATAAAAAGCCTCAAAATTTCCAATTCCCACATTATCATCAAACAACGACGGGCGATGGAGATGGGGCGACGATACTCGGGAGTGGCGAGTTGCCGGAGCTCCGGTGGGATTGGGAACATGGGATTGGAAACGATTAAAGAAATCAGATCTCGGAAGGAACGAGTGGTTGAGGCAACGAAATCGTCAAAGAAATCATTGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGACGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAACTTAAGAATTCCATTAACAAAGGCTTCAAATGGATGAAGAACAAATGTGCTAAAATCATCTCTGGATTTTAA MDSLNNIKSLKISNSHIIIKQRRAMEMGRRYSGVASCRSSGGIGNMGLETIKEIRSRKERVVEATKSSKKSLEKWWNDPENKRKRRVAKYKFYAVDAKLKNSINKGFKWMKNKCAKIISGF Homology
BLAST of Lsi06G000630 vs. ExPASy TrEMBL
Match: A0A5D3CEU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004420 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15 Identity = 58/101 (57.43%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of Lsi06G000630 vs. ExPASy TrEMBL
Match: A0A0A0LYX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561970 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.8e-13 Identity = 67/129 (51.94%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Lsi06G000630 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.1e-12 Identity = 34/66 (51.52%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Lsi06G000630 vs. ExPASy TrEMBL
Match: A0A7J7D0P0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G01113 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.0e-11 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of Lsi06G000630 vs. ExPASy TrEMBL
Match: A0A151TW82 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010537 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.5e-11 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of Lsi06G000630 vs. NCBI nr
Match: KAG6588594.1 (hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020542.1 hypothetical protein SDJN02_17228, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.8 bits (281), Expect = 2.0e-21 Identity = 65/99 (65.66%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Lsi06G000630 vs. NCBI nr
Match: KAG6588612.1 (hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-21 Identity = 65/98 (66.33%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Lsi06G000630 vs. NCBI nr
Match: KAA0050944.1 (hypothetical protein E6C27_scaffold761G00710 [Cucumis melo var. makuwa] >TYK10291.1 hypothetical protein E5676_scaffold16G004420 [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 8.2e-15 Identity = 58/101 (57.43%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of Lsi06G000630 vs. NCBI nr
Match: KGN66017.1 (hypothetical protein Csa_007529 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 5.9e-13 Identity = 67/129 (51.94%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Lsi06G000630 vs. NCBI nr
Match: KAG7031408.1 (hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12 Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of Lsi06G000630 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 67.8 bits (164), Expect = 6.9e-12 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of Lsi06G000630 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07 Identity = 33/104 (31.73%), Postives = 50/104 (48.08%), Query Frame = 0
BLAST of Lsi06G000630 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 50.8 bits (120), Expect = 8.7e-07 Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of Lsi06G000630 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of Lsi06G000630 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06 Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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