Lsi05G012060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G012060
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PATRONUS 1-like
Location	chr05: 19904302 .. 19906131 (-)
RNA-Seq Expression	Lsi05G012060
Synteny	Lsi05G012060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATTTGAAGAAATCGCCAGAAATTCTTCCACTAGAAATTGAAGAAAGTCGAGATCAAGGAAAGTTTGACTGTGAGTTTCTTTCTAACCTTAACTTTTGAGGCTGTTGTTTTGATTACTGTGTGATTCTATGTTTAATTGAGAAACAGATGAACAACAAGAAATCGTTGAGAAGCGATGAAAAAGATTTTAGGGTTTTGTTTGGTCAAAGTTGCTACTGGAAATTTATTGTCCTTTTTCTTGACCTATGTCGTCGATGGATGATGAAATGAGAATCTGGAGACATTTCATAATGTAAAATTAGGGTTGTTCTGTGTGTACTTTTTAAAGTTGATTCTCTGTTTTTGAGATTGCTAAGGGATGATCTGAAATTAGGAAGGATTTTCATTGCAGATTTAGAACGAAAGATTAAGAAAAGGGGAAAGATTAGCCAAAGGCAATTTACATTTATAATCGGATGATTTTAGTTTTTTGTAACCTTGAATTGAATTATGTACTAATTTCCGTAGGCCTTTTGCCTTGATTTCATCGCTTAATTTGCATTCTCGCTTCCATTTTTCTATTCACAGGATAGAATATACATATCTGCAGTATCAGCACCATGGCAATGACATTGCAAAATGGTGGTCTTATTCAGGATGAGAATCTCAATGTTCACTATAATGGTTAGAACTAACGCTTTCTGTTTGAATTGAAGTTTGGTTCATTCTTTTTATCTACTTGGCTGATTTGATTTTAACATCGTAATTTGTATCACAGGATCTGCCGTTGCAGGGAAGGCTAATGCCATGAATTCACAAAGAAAAAGTGGGCTTAATGGGCGAAAGCCCCTTGGCGATCTATCAAACTCAAGAAAGCCAGTCTTAAACCAGTCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGAGGAAGAAAATGGTGCAGGAAAAAAGAAAAACATACTGAAAGGCTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTACTCGGGGATATTTCGAACTTTGGAAAGAACGATCACAATGCTATCTGTGAGGAGCGCTTCCTGCACAACCATCAAGATTGTATTAAAGCACAAAATTGCCTAGACAAGGATCAATTTCTGAGCCTTATTGGACTTGGTATGGTTGTGTCAAGTTTTTTTATATCTATCTCGAAAATCCCACTTTTCTTTTATGCTTATTGAAAATTTTGTTCCATCTTGTCATTTAGATCTTCCCAAAGAGTTGAAGATATCCACTACAAGAAAGGTCAGTTTTGATGATATCTTCCCTTAGTTCTATAGTCTTTTGGAGCAAAACACAATAACAAGTTGGGTTTTCTGTCTTTCAGCCTGATAGTCCATTGAAGCTGCCCAAGGAAATGGAGGAATTGGCAGGATTTGATCAATCTCCAAAGAAGTTGTGTCTGTTTGGAAGAGGAGGACTTGAATCATTATCGCCTTGTAAATCGCCTGAATCGCCTTCAGTTGATTGCTTTGCTGTTTGGAAGGACGGTGATAGTATCGATTTCACATTGATAAAGACCCCATGAAGCGCACCTTGGCCTTTGCTTTCATCTGGAAAGATTGGTAATGGTGGTATTTTGATATGAAGATTGTAGATTCTATGGATGTTCGAGGTTGTTAAAACTGGAAATATTTTGTTTAATGTTTTTGTAGATTTTTGGATGCTCAAGGTTGTTTTAAATCAAGATAGTGTAGTTCATGTTTTTTTGTGTTTTGATTGAGATGAAGATTTGTTATCATCTCGTATGCTTCTTTTTGAAAAGGCCATTTGGAAAAGATTGAAATGGAACAGATCTTTTGTCTGTTTCTTTTGGTTT

mRNA sequence

CTAAAATTTGAAGAAATCGCCAGAAATTCTTCCACTAGAAATTGAAGAAAGTCGAGATCAAGGAAAGTTTGACTGATAGAATATACATATCTGCAGTATCAGCACCATGGCAATGACATTGCAAAATGGTGGTCTTATTCAGGATGAGAATCTCAATGTTCACTATAATGGATCTGCCGTTGCAGGGAAGGCTAATGCCATGAATTCACAAAGAAAAAGTGGGCTTAATGGGCGAAAGCCCCTTGGCGATCTATCAAACTCAAGAAAGCCAGTCTTAAACCAGTCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGAGGAAGAAAATGGTGCAGGAAAAAAGAAAAACATACTGAAAGGCTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTACTCGGGGATATTTCGAACTTTGGAAAGAACGATCACAATGCTATCTGTGAGGAGCGCTTCCTGCACAACCATCAAGATTGTATTAAAGCACAAAATTGCCTAGACAAGGATCAATTTCTGAGCCTTATTGGACTTGGTATGGTTGTGTCAAATCTTCCCAAAGAGTTGAAGATATCCACTACAAGAAAGCCTGATAGTCCATTGAAGCTGCCCAAGGAAATGGAGGAATTGGCAGGATTTGATCAATCTCCAAAGAAGTTGTGTCTGTTTGGAAGAGGAGGACTTGAATCATTATCGCCTTGTAAATCGCCTGAATCGCCTTCAGTTGATTGCTTTGCTGTTTGGAAGGACGGTGATAGTATCGATTTCACATTGATAAAGACCCCATGAAGCGCACCTTGGCCTTTGCTTTCATCTGGAAAGATTGGTAATGGTGGTATTTTGATATGAAGATTGTAGATTCTATGGATGTTCGAGGTTGTTAAAACTGGAAATATTTTGTTTAATGTTTTTGTAGATTTTTGGATGCTCAAGGTTGTTTTAAATCAAGATAGTGTAGTTCATGTTTTTTTGTGTTTTGATTGAGATGAAGATTTGTTATCATCTCGTATGCTTCTTTTTGAAAAGGCCATTTGGAAAAGATTGAAATGGAACAGATCTTTTGTCTGTTTCTTTTGGTTT

Coding sequence (CDS)

ATGGCAATGACATTGCAAAATGGTGGTCTTATTCAGGATGAGAATCTCAATGTTCACTATAATGGATCTGCCGTTGCAGGGAAGGCTAATGCCATGAATTCACAAAGAAAAAGTGGGCTTAATGGGCGAAAGCCCCTTGGCGATCTATCAAACTCAAGAAAGCCAGTCTTAAACCAGTCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGAGGAAGAAAATGGTGCAGGAAAAAAGAAAAACATACTGAAAGGCTCTGAGAGGGTGCAGAAGGGTACTCGAAAAGTACTCGGGGATATTTCGAACTTTGGAAAGAACGATCACAATGCTATCTGTGAGGAGCGCTTCCTGCACAACCATCAAGATTGTATTAAAGCACAAAATTGCCTAGACAAGGATCAATTTCTGAGCCTTATTGGACTTGGTATGGTTGTGTCAAATCTTCCCAAAGAGTTGAAGATATCCACTACAAGAAAGCCTGATAGTCCATTGAAGCTGCCCAAGGAAATGGAGGAATTGGCAGGATTTGATCAATCTCCAAAGAAGTTGTGTCTGTTTGGAAGAGGAGGACTTGAATCATTATCGCCTTGTAAATCGCCTGAATCGCCTTCAGTTGATTGCTTTGCTGTTTGGAAGGACGGTGATAGTATCGATTTCACATTGATAAAGACCCCATGA

Protein sequence

MAMTLQNGGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQSSKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKNDHNAICEERFLHNHQDCIKAQNCLDKDQFLSLIGLGMVVSNLPKELKISTTRKPDSPLKLPKEMEELAGFDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDGDSIDFTLIKTP

Homology

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BLAST of Lsi05G012060 vs. ExPASy TrEMBL
Match: A0A5A7SLI2 (Translational activator gcn1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002420 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 183/232 (78.88%), Postives = 199/232 (85.78%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHY-NGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQ 60
           MAMT QNGGLI DENLNV Y  GSAVAGKANAMNSQRK+GL+GRKPLGDLSNSRKPV+NQ
Sbjct: 1   MAMTFQNGGLIHDENLNVQYTKGSAVAGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKN-DHNAICEERF 120
           SSKRQ TKNLTFI+EENGAGK KNI KGSE+VQKGTRKVL DISNFGKN +HN ICEERF
Sbjct: 61  SSKRQTTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLDKDQFLSLIGLGMVVSNLPKELKISTTRKPDSPLKLPKEMEELAGF 180
           LHNHQDCIKAQNCLDKDQFLS+IGL     +  KELKISTT+KPDSPLKL +EM+E AGF
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGL-----DHSKELKISTTKKPDSPLKL-EEMDEFAGF 180

Query: 181 DQSPKKLCLFGRGGLESLSPCKSPE---SPSVDCFAVWKDGDSIDFTLIKTP 228
           D+SPKKL LFGR G E  SPCKSPE   SPS+D F+   D +SI+FTLIKTP
Sbjct: 181 DESPKKLFLFGRRGFEPSSPCKSPESSPSPSIDHFSFLTDTNSIEFTLIKTP 226

[Close]

BLAST of Lsi05G012060 vs. ExPASy TrEMBL
Match: A0A1S3C1L0 (uncharacterized protein LOC103495422 OS=Cucumis melo OX=3656 GN=LOC103495422 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 183/232 (78.88%), Postives = 199/232 (85.78%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHY-NGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQ 60
           MAMT QNGGLI DENLNV Y  GSAVAGKANAMNSQRK+GL+GRKPLGDLSNSRKPV+NQ
Sbjct: 1   MAMTFQNGGLIHDENLNVQYTKGSAVAGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKN-DHNAICEERF 120
           SSKRQ TKNLTFI+EENGAGK KNI KGSE+VQKGTRKVL DISNFGKN +HN ICEERF
Sbjct: 61  SSKRQTTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLDKDQFLSLIGLGMVVSNLPKELKISTTRKPDSPLKLPKEMEELAGF 180
           LHNHQDCIKAQNCLDKDQFLS+IGL     +  KELKISTT+KPDSPLKL +EM+E AGF
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGL-----DHSKELKISTTKKPDSPLKL-EEMDEFAGF 180

Query: 181 DQSPKKLCLFGRGGLESLSPCKSPE---SPSVDCFAVWKDGDSIDFTLIKTP 228
           D+SPKKL LFGR G E  SPCKSPE   SPS+D F+   D +SI+FTLIKTP
Sbjct: 181 DESPKKLFLFGRRGFEPSSPCKSPESSPSPSIDHFSFLTDTNSIEFTLIKTP 226

[Close]

BLAST of Lsi05G012060 vs. ExPASy TrEMBL
Match: A0A6J1E4Q0 (protein PATRONUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430755 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.6e-86
Identity = 180/251 (71.71%), Postives = 198/251 (78.88%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQS 60
           MAMTLQ+GGL QDENLNV YNGSAVAGKANAMNSQRKSGL+GRKPLGDLSNSRKP LNQS
Sbjct: 1   MAMTLQSGGLTQDENLNVRYNGSAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQS 60

Query: 61  SKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKND----------- 120
           SK QNTKNLTFI+EE GAGKKKNILKGSE+VQKGTRKVL DISN G  +           
Sbjct: 61  SKWQNTKNLTFIDEETGAGKKKNILKGSEKVQKGTRKVLSDISNSGMPNLPEASKKKQKL 120

Query: 121 ------------HNAICEERFLHNHQDCIKAQN-CLDKDQFLSLIGLGMVVSNLPKELKI 180
                       HNAICEERFLH+HQDCIK+QN  +DKDQFLS++GL     +LPKEL  
Sbjct: 121 KLSTVREESSLHHNAICEERFLHDHQDCIKSQNSAMDKDQFLSIVGL-----DLPKELMT 180

Query: 181 STTRKPDSPLKLPKEMEELAGFDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDG 228
           ST RKPDSPLKL  EM ELA  D+SPKKLCLFGRG  +S  PCKSP+SPSVD F++WKD 
Sbjct: 181 STRRKPDSPLKL-MEMAELAVVDRSPKKLCLFGRGWPDSSPPCKSPKSPSVDTFSLWKDT 240

[Close]

BLAST of Lsi05G012060 vs. ExPASy TrEMBL
Match: A0A6J1J3M1 (protein PATRONUS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483088 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.8e-85
Identity = 180/249 (72.29%), Postives = 195/249 (78.31%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQS 60
           MAMTLQ+GGL QDENLNV YNGSAVAGKANAMNSQRKSGL+GRKPLGDLSNSRKP LNQS
Sbjct: 1   MAMTLQSGGLTQDENLNVRYNGSAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQS 60

Query: 61  SKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKND----------- 120
           SK QNTKNLTFI+EE GAGKKKNILKGSE+VQKGTRKVL DISN G  +           
Sbjct: 61  SKWQNTKNLTFIDEETGAGKKKNILKGSEKVQKGTRKVLSDISNSGMPNLPEASKKKQKL 120

Query: 121 -----------HNAICEERFLHNHQDCIKAQN-CLDKDQFLSLIGLGMVVSNLPKELKIS 180
                      HNAICEERFLHNHQDCIK+QN  +DKDQFLS++GL     +LP EL  S
Sbjct: 121 KLSTVREESLHHNAICEERFLHNHQDCIKSQNSAMDKDQFLSIVGL-----DLPNELMTS 180

Query: 181 TTRKPDSPLKLPKEMEELAGFDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDGD 227
           T RKPDSPLKL  EM ELA  D+SPKKLCLFGRG   S  PCKSP+SPSVD F++WKD D
Sbjct: 181 TRRKPDSPLKL-MEMAELAVVDRSPKKLCLFGRGWPASSPPCKSPKSPSVDTFSLWKDTD 240

[Close]

BLAST of Lsi05G012060 vs. ExPASy TrEMBL
Match: A0A6J1HU23 (uncharacterized protein LOC111467798 OS=Cucurbita maxima OX=3661 GN=LOC111467798 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.2e-82
Identity = 173/250 (69.20%), Postives = 195/250 (78.00%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQS 60
           MAMTLQNGG++QDEN NVHYNG +VAGK NAMNSQRKSG++GRKPLGDLSNSRKPVLNQS
Sbjct: 1   MAMTLQNGGVLQDENHNVHYNGPSVAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60

Query: 61  SKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKND----------- 120
            K QNTKNLTFI+EEN  GKKKN LKGSERVQKGTRKVL DISN GK +           
Sbjct: 61  LKWQNTKNLTFIDEENCEGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120

Query: 121 -----------HNAICEERFLHNHQDCIKAQNC-LDKDQFLSLIGLGMVVSNLPKELKIS 180
                      HN+ICEERFLHNHQ+CIKA+ C ++KDQFLS++GL     +LPK+LK+ 
Sbjct: 121 KLSTVREELIHHNSICEERFLHNHQECIKARKCAVEKDQFLSIVGL-----DLPKKLKMD 180

Query: 181 TTRKPDSPLKLPKEMEELAGFDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDGD 228
             RKPDSPLKL KE  E   FDQSPKKL LFGRG L+S  PCKSP+SPSVD F++WKD D
Sbjct: 181 --RKPDSPLKL-KETAEWEIFDQSPKKLRLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSD 240

[Close]

BLAST of Lsi05G012060 vs. NCBI nr
Match: XP_038899809.1 (uncharacterized protein LOC120087032 [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.7e-98
Identity = 194/230 (84.35%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MAMTLQN-GGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQ 60
           MAMTLQN GGLIQDENLNV YNGSA+AGKANAMNSQRKSGLNGRKPLGDLSNSRKPV+NQ
Sbjct: 1   MAMTLQNGGGLIQDENLNVRYNGSAIAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKNDHNAICEERFL 120
           SSKRQNT NL FI+EEN AGKKKN+ KGSERV KGTRKVL DISNFGK+DHNAICEERFL
Sbjct: 61  SSKRQNTMNLMFIDEENDAGKKKNVPKGSERVPKGTRKVLSDISNFGKSDHNAICEERFL 120

Query: 121 HNHQDCIKAQNCLDKDQFLSLIGLGMVVSNLPKELKI--STTRKPDSPLKLPKEMEELAG 180
           HNHQDCIKAQNCL+KDQFLS+IGL     ++ KELKI  STTRKPDSPLK+ KEMEE AG
Sbjct: 121 HNHQDCIKAQNCLNKDQFLSIIGL-----DISKELKISTSTTRKPDSPLKMLKEMEEWAG 180

Query: 181 FDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDGDSIDFTLIKTP 228
           FDQSPKK  LFGRGGLES +P KSPESPSVD F+VWKD DSIDFTLIKTP
Sbjct: 181 FDQSPKKSFLFGRGGLESSTPLKSPESPSVDRFSVWKDSDSIDFTLIKTP 225

[Close]

BLAST of Lsi05G012060 vs. NCBI nr
Match: XP_004140764.1 (uncharacterized protein LOC101213514 [Cucumis sativus] >KAE8650464.1 hypothetical protein Csa_011584 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 2.2e-90
Identity = 183/231 (79.22%), Postives = 199/231 (86.15%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHY-NGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQ 60
           MAMT QNGGL+ DENL+V Y  GSAV GKANAMNSQRK+GL+GRKPLGDLSNSRKPV+NQ
Sbjct: 1   MAMTFQNGGLVHDENLSVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKN-DHNAICEERF 120
           SSKRQNTKNLTFI+EENGAGK KNI KGSE+VQKGTRKVL DISNFGKN +HN ICEERF
Sbjct: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLDKDQFLSLIGLGMVVSNLPKELKISTTRKPDSPLKLPKEMEELAGF 180
           LHNHQDCIKAQNCLDKDQFLS+IGL     +  KELKI+TT KPDSPLKL KEMEE AGF
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGL-----DHSKELKIATTIKPDSPLKL-KEMEEFAGF 180

Query: 181 DQSPKKLCLFGRGGLESLSPCKSPE--SPSVDCFAVWKDGDSIDFTLIKTP 228
           D+SPKKL LFGR G ES  PCKSPE  SPS+D F+ W D +SIDFTL+KTP
Sbjct: 181 DESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 225

[Close]

BLAST of Lsi05G012060 vs. NCBI nr
Match: XP_008455201.1 (PREDICTED: uncharacterized protein LOC103495422 [Cucumis melo] >KAA0031478.1 Translational activator gcn1 [Cucumis melo var. makuwa] >TYK06931.1 Translational activator gcn1 [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 3.2e-89
Identity = 183/232 (78.88%), Postives = 199/232 (85.78%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHY-NGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQ 60
           MAMT QNGGLI DENLNV Y  GSAVAGKANAMNSQRK+GL+GRKPLGDLSNSRKPV+NQ
Sbjct: 1   MAMTFQNGGLIHDENLNVQYTKGSAVAGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKN-DHNAICEERF 120
           SSKRQ TKNLTFI+EENGAGK KNI KGSE+VQKGTRKVL DISNFGKN +HN ICEERF
Sbjct: 61  SSKRQTTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLDKDQFLSLIGLGMVVSNLPKELKISTTRKPDSPLKLPKEMEELAGF 180
           LHNHQDCIKAQNCLDKDQFLS+IGL     +  KELKISTT+KPDSPLKL +EM+E AGF
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGL-----DHSKELKISTTKKPDSPLKL-EEMDEFAGF 180

Query: 181 DQSPKKLCLFGRGGLESLSPCKSPE---SPSVDCFAVWKDGDSIDFTLIKTP 228
           D+SPKKL LFGR G E  SPCKSPE   SPS+D F+   D +SI+FTLIKTP
Sbjct: 181 DESPKKLFLFGRRGFEPSSPCKSPESSPSPSIDHFSFLTDTNSIEFTLIKTP 226

[Close]

BLAST of Lsi05G012060 vs. NCBI nr
Match: KAG7014754.1 (hypothetical protein SDJN02_22383 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-86
Identity = 180/250 (72.00%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQS 60
           MAMTLQ+GGL QDENLNV YNGSAVAGKANAMNSQRKSGL+GRKPLGDLSNSRKP LNQS
Sbjct: 1   MAMTLQSGGLTQDENLNVRYNGSAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQS 60

Query: 61  SKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKND----------- 120
           SK QNTKNLTFI+EE GAGKKKNILKGSE+VQKGTRKVL DISN G  +           
Sbjct: 61  SKLQNTKNLTFIDEETGAGKKKNILKGSEKVQKGTRKVLSDISNSGMPNLPEASKKKQKL 120

Query: 121 -----------HNAICEERFLHNHQDCIKAQN-CLDKDQFLSLIGLGMVVSNLPKELKIS 180
                      HNAICEERFLHNHQDCIK+QN  +DKDQFLS++GL     + PKEL  S
Sbjct: 121 KLSTVREKSLHHNAICEERFLHNHQDCIKSQNSAMDKDQFLSIVGL-----DFPKELMTS 180

Query: 181 TTRKPDSPLKLPKEMEELAGFDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDGD 228
           T RKPDSPLKL  EM ELA  D+SPKKLCLFGRG  +S  PCKSP+SPSVD F++WKD D
Sbjct: 181 TRRKPDSPLKL-MEMAELAVVDRSPKKLCLFGRGWPDSSPPCKSPKSPSVDTFSLWKDTD 240

[Close]

BLAST of Lsi05G012060 vs. NCBI nr
Match: KAG6576706.1 (rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-86
Identity = 180/250 (72.00%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MAMTLQNGGLIQDENLNVHYNGSAVAGKANAMNSQRKSGLNGRKPLGDLSNSRKPVLNQS 60
           MAMTLQ+GGL QDENLNV YNGSAVAGKANAMNSQRKSGL+GRKPLGDLSNSRKP LNQS
Sbjct: 323 MAMTLQSGGLTQDENLNVRYNGSAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQS 382

Query: 61  SKRQNTKNLTFIEEENGAGKKKNILKGSERVQKGTRKVLGDISNFGKND----------- 120
           SK QNTKNLTFI+EE GAGKKKNILKGSE+VQKGTRKVL DISN G  +           
Sbjct: 383 SKLQNTKNLTFIDEETGAGKKKNILKGSEKVQKGTRKVLSDISNSGMPNLPEASKKKQKL 442

Query: 121 -----------HNAICEERFLHNHQDCIKAQN-CLDKDQFLSLIGLGMVVSNLPKELKIS 180
                      HNAICEERFLHNHQDCIK+QN  +DKDQFLS++GL     + PKEL  S
Sbjct: 443 KLSTVREKSLHHNAICEERFLHNHQDCIKSQNSAMDKDQFLSIVGL-----DFPKELMTS 502

Query: 181 TTRKPDSPLKLPKEMEELAGFDQSPKKLCLFGRGGLESLSPCKSPESPSVDCFAVWKDGD 228
           T RKPDSPLKL  EM ELA  D+SPKKLCLFGRG  +S  PCKSP+SPSVD F++WKD D
Sbjct: 503 TRRKPDSPLKL-MEMAELAVVDRSPKKLCLFGRGWPDSSPPCKSPKSPSVDTFSLWKDTD 562

The following BLAST results are available for this feature:

BLAST of Lsi05G012060 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G012060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLI2	1.6e-89	78.88	Translational activator gcn1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C1L0	1.6e-89	78.88	uncharacterized protein LOC103495422 OS=Cucumis melo OX=3656 GN=LOC103495422 PE=...	[more]
A0A6J1E4Q0	3.6e-86	71.71	protein PATRONUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430755 PE=4 SV=1	[more]
A0A6J1J3M1	1.8e-85	72.29	protein PATRONUS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483088 PE=4 SV=1	[more]
A0A6J1HU23	3.2e-82	69.20	uncharacterized protein LOC111467798 OS=Cucurbita maxima OX=3661 GN=LOC111467798...	[more]

BLAST of Lsi05G012060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899809.1	1.7e-98	84.35	uncharacterized protein LOC120087032 [Benincasa hispida]	[more]
XP_004140764.1	2.2e-90	79.22	uncharacterized protein LOC101213514 [Cucumis sativus] >KAE8650464.1 hypothetica...	[more]
XP_008455201.1	3.2e-89	78.88	PREDICTED: uncharacterized protein LOC103495422 [Cucumis melo] >KAA0031478.1 Tra...	[more]
KAG7014754.1	3.3e-86	72.00	hypothetical protein SDJN02_22383 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576706.1	3.3e-86	72.00	rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Lsi05G012060 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..67
None	No IPR available	PANTHER	PTHR35125:SF2	NEURON NAVIGATOR 1-LIKE	coord: 3..227
IPR039326	Protein Patronus	PANTHER	PTHR35125	NEURON NAVIGATOR 1-LIKE-RELATED	coord: 3..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G012060.1	Lsi05G012060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007346	regulation of mitotic cell cycle