Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGTTTTGATTTATTTCTTCTTCCGGGTCCAAAAATTCGTGATGTATATTCCCAAATCATAAGATTTCCTTCATGATTTCTTCCAATATTGGAAACCCCCTTTGCTTTTTCTGTTGTAAAGTTGATCGGTTCATGATTTGACAAGTTTTCTCGTTTTTGCACATGAAGCAGAAATGGGATTCTGGACCTTCTTGGAAGGGCTTCTGCTGTTTGCAAACGCTTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGGTAATAGGGCTCATCCATGCATGCCAATTCTTGAGACTTCCACTCATTCTTTTCAACATCATCTTCATCATCATCAAGCTTTTCTCTGGTTGATTTCAGTATATAACTTGAAAGAGGTCCCTGTAAATTATTGTATCTCGAAGCATTACATAATTGAATTGAGTGAAATATAGTTTCCATTTCCATTACTGGTAATATGTTTGTTTGCTGTTGAGTGGCAGATAACACTATAGAATTTGCTCTTAATTTTAGTTTGCATTTTCGTTGTCAGCCCATTTTCTGAGTTCATTTGTTTTGGTCACACAAACTTGTAGGAAGAATTATCCAGCATATTCAGCGACCTTAAAAATCCTCTGTTTATAAGAACATGAACTGATCTATATGTTCTACAATACAAGTTTGGAGCAATCCAGTTCATCTTTACATATGAGAGTATTATTCAGAAGAAAGAAACAGAGCCTAGAAGTGATCAATAATACATCAATATCAAACACAGAATGCCTAAAATCACTACAAATCAAATCACTCTACTGGTATCATAACTTCATTGGTTCTCAAAGAAGGCAATGTCCAAGGTGGATTATATCTTGCCAACACATAATCCCCAATCACCTTATGCCCATCTTTCTCCAAGTTTTTCTTTAGATTCTCCAACTTCTGTGCCACCACTCCCTCCGTCGCAATTCCGCTGAATCTCACGACGGCGAATTTTCTCTCCCCTTCTTCCCTTATCACAACACTTTCATCCACTGGTTTAGGAGCCTCCTCCGCCTTCTTGTACTTGCTAGGTAGCACAAACTGCATCGTCACCGGCTTCCCTTCGCCGCCACCGCCCCCCGTCACCACCGGAGCTGTCATCGAAATCTTCTCCGATTTGGTGATGACCGGCGCCGTCATGGCCACCTTCTCGGACTTGATGTTCTGTGGCTGGCCAATGGCTCCGATGTATTTTGCTAATACGGTGAAGCCACCGTCTCTGTTGCCTCTGAACTGGGTCGGATCGTAG
mRNA sequence
ATGTTCAAAATGGGATTCTGGACCTTCTTGGAAGGGCTTCTGCTGTTTGCAAACGCTTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGGAAGAATTATCCAGCATATTCAGCGACCTTAAAAATCCTCTATTCTCCAACTTCTGTGCCACCACTCCCTCCGTCGCAATTCCGCTGAATCTCACGACGGCGAATTTTCTCTCCCCTTCTTCCCTTATCACAACACTTTCATCCACTGGTTTAGGAGCCTCCTCCGCCTTCTTGTACTTGCTAGGTAGCACAAACTGCATCGTCACCGGCTTCCCTTCGCCGCCACCGCCCCCCGTCACCACCGGAGCTGTCATCGAAATCTTCTCCGATTTGGTGATGACCGGCGCCGTCATGGCCACCTTCTCGGACTTGATGTTCTGTGGCTGGCCAATGGCTCCGATGTATTTTGCTAATACGGTGAAGCCACCGTCTCTGTTGCCTCTGAACTGGGTCGGATCGTAG
Coding sequence (CDS)
ATGTTCAAAATGGGATTCTGGACCTTCTTGGAAGGGCTTCTGCTGTTTGCAAACGCTTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGGAAGAATTATCCAGCATATTCAGCGACCTTAAAAATCCTCTATTCTCCAACTTCTGTGCCACCACTCCCTCCGTCGCAATTCCGCTGAATCTCACGACGGCGAATTTTCTCTCCCCTTCTTCCCTTATCACAACACTTTCATCCACTGGTTTAGGAGCCTCCTCCGCCTTCTTGTACTTGCTAGGTAGCACAAACTGCATCGTCACCGGCTTCCCTTCGCCGCCACCGCCCCCCGTCACCACCGGAGCTGTCATCGAAATCTTCTCCGATTTGGTGATGACCGGCGCCGTCATGGCCACCTTCTCGGACTTGATGTTCTGTGGCTGGCCAATGGCTCCGATGTATTTTGCTAATACGGTGAAGCCACCGTCTCTGTTGCCTCTGAACTGGGTCGGATCGTAG
Protein sequence
MFKMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSSIFSDLKNPLFSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFSDLVMTGAVMATFSDLMFCGWPMAPMYFANTVKPPSLLPLNWVGS
Homology
BLAST of Lsi03G021690 vs. ExPASy TrEMBL
Match:
A0A371HCV9 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_16169 PE=3 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 1.7e-38
Identity = 116/216 (53.70%), Postives = 128/216 (59.26%), Query Frame = 0
Query: 3 KMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSS------I 62
KMGFWTFLEG LLFANA AILNEDRFLA RGWTLAEM+ +RR++LKGQ++ I
Sbjct: 46 KMGFWTFLEGFLLFANALAILNEDRFLAPRGWTLAEMTGQRRNSLKGQKKQKPNKQKVLI 105
Query: 63 FSDLK---------------------------------NPLF-------SNFCATTPSVA 122
F+++ NP F S F TT S A
Sbjct: 106 FTNIHHFHSTGIITSLVLNAGIVQGGLYLPNKKSPSTLNPSFSKLALSLSTFSLTTSSDA 165
Query: 123 IPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT---GFPSPPPPP--VTT 165
P N TT FLSPSSLITTLSS GLGASSAF Y G TNCIVT FPS PPPP V T
Sbjct: 166 TPPNFTTPYFLSPSSLITTLSSVGLGASSAFPYTFGKTNCIVTILFFFPSSPPPPSFVIT 225
BLAST of Lsi03G021690 vs. ExPASy TrEMBL
Match:
A0A1Q3BC67 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09000 PE=4 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 1.6e-23
Identity = 78/134 (58.21%), Postives = 86/134 (64.18%), Query Frame = 0
Query: 65 FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT-GFPS 124
F++F TT SVAIP N TT FLSPSS+ITTLSSTGLGASSAF YL G+ NC+VT F S
Sbjct: 37 FASFSFTTLSVAIPANFTTPYFLSPSSVITTLSSTGLGASSAFRYLEGNRNCMVTVFFSS 96
Query: 125 PPPPPVTTGAVIEIFS-------------------DLVMTGAVMATFSDLMFCGWPMAPM 179
P P VTTG VI IFS DLV+TGAV+A FS LMF G P P+
Sbjct: 97 PSPLFVTTGTVIAIFSLSEDLVMTGAVIAIFLLSEDLVITGAVIAIFSGLMFLGLPDTPI 156
BLAST of Lsi03G021690 vs. ExPASy TrEMBL
Match:
A0A0B0P8C7 (Lactate utilization B OS=Gossypium arboreum OX=29729 GN=F383_05469 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 4.1e-16
Identity = 63/105 (60.00%), Postives = 70/105 (66.67%), Query Frame = 0
Query: 65 FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSP 124
FS F +TT SVA P N TT FLSPSS ITTLSS G GASSA LY+ G+ NC+VT
Sbjct: 37 FSTFSSTTLSVATPPNFTTPYFLSPSSFITTLSSKGFGASSAVLYVAGNRNCMVTMLLL- 96
Query: 125 PPPPVTTGAVIEIFS-----DLVMTGAVMATFSDLMFCGWPMAPM 165
P VTTGAV+ IFS DLV+TGAV+A FS F G P APM
Sbjct: 97 -SPFVTTGAVMGIFSLLFPGDLVITGAVIAIFSGFAFWGLPKAPM 139
BLAST of Lsi03G021690 vs. ExPASy TrEMBL
Match:
A0A6J1J7W2 (protein transport protein yos1-like OS=Cucurbita maxima OX=3661 GN=LOC111482074 PE=3 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = 0
Query: 4 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ 51
MGFWTFLEGLLLFANAFAILNEDRFL+RRGWTLAEMSR RR+TLKGQ
Sbjct: 1 MGFWTFLEGLLLFANAFAILNEDRFLSRRGWTLAEMSRGRRNTLKGQ 47
BLAST of Lsi03G021690 vs. ExPASy TrEMBL
Match:
A0A6J1F388 (protein transport protein yos1-like OS=Cucurbita moschata OX=3662 GN=LOC111441969 PE=3 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 0
Query: 4 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ 51
MGFWTFLEGLLLFANAFAILNEDRFL+RRGWTL EMSR RR+TLKGQ
Sbjct: 1 MGFWTFLEGLLLFANAFAILNEDRFLSRRGWTLGEMSRGRRNTLKGQ 47
BLAST of Lsi03G021690 vs. NCBI nr
Match:
RDY00631.1 (hypothetical protein CR513_16169, partial [Mucuna pruriens])
HSP 1 Score: 169.1 bits (427), Expect = 3.6e-38
Identity = 116/216 (53.70%), Postives = 128/216 (59.26%), Query Frame = 0
Query: 3 KMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSS------I 62
KMGFWTFLEG LLFANA AILNEDRFLA RGWTLAEM+ +RR++LKGQ++ I
Sbjct: 46 KMGFWTFLEGFLLFANALAILNEDRFLAPRGWTLAEMTGQRRNSLKGQKKQKPNKQKVLI 105
Query: 63 FSDLK---------------------------------NPLF-------SNFCATTPSVA 122
F+++ NP F S F TT S A
Sbjct: 106 FTNIHHFHSTGIITSLVLNAGIVQGGLYLPNKKSPSTLNPSFSKLALSLSTFSLTTSSDA 165
Query: 123 IPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT---GFPSPPPPP--VTT 165
P N TT FLSPSSLITTLSS GLGASSAF Y G TNCIVT FPS PPPP V T
Sbjct: 166 TPPNFTTPYFLSPSSLITTLSSVGLGASSAFPYTFGKTNCIVTILFFFPSSPPPPSFVIT 225
BLAST of Lsi03G021690 vs. NCBI nr
Match:
GAV65485.1 (hypothetical protein CFOL_v3_09000 [Cephalotus follicularis])
HSP 1 Score: 119.4 bits (298), Expect = 3.2e-23
Identity = 78/134 (58.21%), Postives = 86/134 (64.18%), Query Frame = 0
Query: 65 FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT-GFPS 124
F++F TT SVAIP N TT FLSPSS+ITTLSSTGLGASSAF YL G+ NC+VT F S
Sbjct: 37 FASFSFTTLSVAIPANFTTPYFLSPSSVITTLSSTGLGASSAFRYLEGNRNCMVTVFFSS 96
Query: 125 PPPPPVTTGAVIEIFS-------------------DLVMTGAVMATFSDLMFCGWPMAPM 179
P P VTTG VI IFS DLV+TGAV+A FS LMF G P P+
Sbjct: 97 PSPLFVTTGTVIAIFSLSEDLVMTGAVIAIFLLSEDLVITGAVIAIFSGLMFLGLPDTPI 156
BLAST of Lsi03G021690 vs. NCBI nr
Match:
KAG5582823.1 (hypothetical protein H5410_053450 [Solanum commersonii])
HSP 1 Score: 104.8 bits (260), Expect = 8.3e-19
Identity = 66/101 (65.35%), Postives = 70/101 (69.31%), Query Frame = 0
Query: 65 FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSP 124
FS F T S A+PLN TT FLSPSS ITTLSS G GASSAF+Y G NCIVT F SP
Sbjct: 85 FSTFSFTILSFAVPLNFTTPYFLSPSSTITTLSSNGFGASSAFVYFSGKINCIVTVFFSP 144
Query: 125 PPPPVTTGAVIEIFSD-LVMTGAVMATFSDLMFCGWPMAPM 165
P VTTGAV+ I SD LV+TGAVMA S L F G P APM
Sbjct: 145 SPVLVTTGAVMAISSDELVITGAVMAIVSGLEFWGLPNAPM 185
BLAST of Lsi03G021690 vs. NCBI nr
Match:
XP_038906232.1 (protein transport protein yos1-like [Benincasa hispida] >XP_038906233.1 protein transport protein yos1-like [Benincasa hispida])
HSP 1 Score: 95.1 bits (235), Expect = 6.6e-16
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
Query: 4 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ 51
MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERR+TLKGQ
Sbjct: 1 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRNTLKGQ 47
BLAST of Lsi03G021690 vs. NCBI nr
Match:
KHG20344.1 (Lactate utilization B [Gossypium arboreum])
HSP 1 Score: 94.7 bits (234), Expect = 8.6e-16
Identity = 63/105 (60.00%), Postives = 70/105 (66.67%), Query Frame = 0
Query: 65 FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSP 124
FS F +TT SVA P N TT FLSPSS ITTLSS G GASSA LY+ G+ NC+VT
Sbjct: 37 FSTFSSTTLSVATPPNFTTPYFLSPSSFITTLSSKGFGASSAVLYVAGNRNCMVTMLLL- 96
Query: 125 PPPPVTTGAVIEIFS-----DLVMTGAVMATFSDLMFCGWPMAPM 165
P VTTGAV+ IFS DLV+TGAV+A FS F G P APM
Sbjct: 97 -SPFVTTGAVMGIFSLLFPGDLVITGAVIAIFSGFAFWGLPKAPM 139
BLAST of Lsi03G021690 vs. TAIR 10
Match:
AT2G37975.1 (Yos1-like protein )
HSP 1 Score: 71.6 bits (174), Expect = 7.2e-13
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0
Query: 4 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRE-RRSTLKGQ 51
MGFWT +EGLLLFANA AILNEDRFLA +GWTLAE+ + +R++LKGQ
Sbjct: 1 MGFWTLMEGLLLFANALAILNEDRFLAPKGWTLAELHQTGKRNSLKGQ 48
BLAST of Lsi03G021690 vs. TAIR 10
Match:
AT3G54085.1 (Yos1-like protein )
HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query: 4 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQ 51
MGFWT L+GLLLFANA AILNEDRFL RGWTL E+ + +RR++ KGQ
Sbjct: 1 MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQ 48
BLAST of Lsi03G021690 vs. TAIR 10
Match:
AT3G54085.2 (Yos1-like protein )
HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query: 4 MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQ 51
MGFWT L+GLLLFANA AILNEDRFL RGWTL E+ + +RR++ KGQ
Sbjct: 1 MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQ 48
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A371HCV9 | 1.7e-38 | 53.70 | Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_16169 P... | [more] |
| A0A1Q3BC67 | 1.6e-23 | 58.21 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09000 PE=4... | [more] |
| A0A0B0P8C7 | 4.1e-16 | 60.00 | Lactate utilization B OS=Gossypium arboreum OX=29729 GN=F383_05469 PE=4 SV=1 | [more] |
| A0A6J1J7W2 | 4.6e-15 | 93.62 | protein transport protein yos1-like OS=Cucurbita maxima OX=3661 GN=LOC111482074 ... | [more] |
| A0A6J1F388 | 1.3e-14 | 91.49 | protein transport protein yos1-like OS=Cucurbita moschata OX=3662 GN=LOC11144196... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| RDY00631.1 | 3.6e-38 | 53.70 | hypothetical protein CR513_16169, partial [Mucuna pruriens] | [more] |
| GAV65485.1 | 3.2e-23 | 58.21 | hypothetical protein CFOL_v3_09000 [Cephalotus follicularis] | [more] |
| KAG5582823.1 | 8.3e-19 | 65.35 | hypothetical protein H5410_053450 [Solanum commersonii] | [more] |
| XP_038906232.1 | 6.6e-16 | 97.87 | protein transport protein yos1-like [Benincasa hispida] >XP_038906233.1 protein ... | [more] |
| KHG20344.1 | 8.6e-16 | 60.00 | Lactate utilization B [Gossypium arboreum] | [more] |
