Lsi02G021690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTTTTTTCACTTAGAAGTTTCGAAGTTTTTTCGTTTTCTGTTTTCTTTTCTTTTCCCCATGAGTTTGCAAGATTTGATTCATTGCTATCTTTTATAATTAATATATGTTCTTTATCCGAATATTTATATATCTAAAAAAGAATTCATATCCAAAAAAATATATTTAAAAGAGGTCCAATATTTTTATCCAAATATTTAAAAGAGGTCCAATATTTTTATCCAAATATTCATTGGTTTTCAAACATGTTGACATTGTATTTAAAGTCCATACAATTACAGAAGATTTGACCTTTTGGTTTAGGGTATTCTGGTATTGGAGGACCAATGAGATTGGTAAGCGTCTGACAAGGACATATGGTCCGAATTAGAAGGTTTATGCTACATTGTTTATCTCAAGGCTTATTGTCAGGACAAGGAAAAATTTACTTGGACGTTGAAACCAATAAAACAACTTGCCTTTTTGTAAATTCTTTTTCTTCACGTAGGTCAATCATATTGAAGATTCGGTCTACTTTGCACTAACAATTTAATTGACTTGTACAGATATCCAGGCTGGAGTATCAACTTATGTGTCTGCTCCCGGCATTATTCAACAGATATCTAGTCTTCATTCAGACTTGAGAACCCTTCAATCTGATCTTGAAAACTCCCTCCCAGGCGACAGAAACAGATGCATCAATGATCTGTTAGTATCTTATTCCTTTATACATGAGTGTCAAATCCATATATCCATCACGCCTTTAGTTTTTTTATGCACTTAATAATATTCAAATGAAGCAATGGAAGTCTGATGGACCAAAGAAATGACCCGTGGCCATCCATACGTTTTATATCTATCCATCCATCCATCCATCTATATATATATTATATATATATATAAACCAACTTTTAAGAAAGGAAAGAATACACATGCATACAAAAATATAAAAAGCCCACAAAAGGGAGGGCCCTAAGGGAAGGGTTTCCAATCAAGCAAAATAAGACCTAACGAATAATTACAAAAATAATGTCAACGACACCTAGAGAGAAACATTAAAATTCATAAGGGAACACACATCAAGAGGGCCCCTCTCAATCCCTCAAAAAATTCCATAGTTTCTCTCCCCAGATACACCATAACATTGCACACACTCATCCATAAAAACTCTTTCTCCTTAAAAGGCGGATAGAGGAGAAACTCCTTGATCATATTACTAACAACTCTGTGACGGGCTAACTGAAAGCCAAACATCTCAAAGAAGAACTTCCGAACACTCATATAATCACAACTCCAAAATAAATGATCTAGATGTTCTTCCATCATTCGACAAAGATTACAACAAAAAGGCCCAAGCAAGGACGATTGGTCACTGGTTGAAGACTGTTTAGGGTGAAGGGTGTTGGTGACCACATATACTCTTGTGATCAAGCATTAGCGTTGAAGACGGTCATTCCTATATAGTTCAAGCTCTACTGGCTTTAACTATTGGGGAAGCTGTCGAAATGAAGGTCAAGATATGGTGTGTAGCTATAGTCTTTATTTTCAAATAAGCAATAATTTTTATGAAAACTATTTTGTTGACATGTATAACATTTTTAGGGTGCGAGGCTAGTTGAGGTAAAAAAGGATTTTCATTATGTCACTGTAGTAGATCATGCCCCTCAGATTGTGTTTGGCCTAAGGAGTTGGGAAGTAGGAGTTGTGAACTCCATTCCTTGTTTGGCCCAAGGAATTTGTGGGTTGCACCACTAAAAACATCAATTTTATACCTTATCAACTTCTTATATTGCGGACCCCTGGAGTTCACAACTCCCTAGACTTCATAACTTCTTTAAGTTCACTATTCCACTCATTGCCCCAAACACCCCCTTAGGCTAGTTGAGTGATTACAAGAGAATATGGACTTGAGCTGTCAAGAAATCTGTTCTATTCTTCTGAATTCCATCTTTAAATTTTTTTAGAACTGTAAAACATCTTATGACCAGCCAGTTTGGAAAGTGAGTTGTATATTGGTGATGGCCACCATGCTGAATCGTGTGCTAATATTCTTTCATTGTTAGAATTGTCCAGTTCTTAAAACATCTTATGACCAGCCAGTCTTATGGTTAATGTGTTTCATTCTATATTCCTGTTGATTTCATGTTCCTTTTTATATATACATATATATATATTTTTAAAATATTACTTTTATTTATTAAAAAACGGTTCTTTCTATCATTAATTGTAGGTGCTCTCTTATTCAAAGTTTGCAGCAATTACTCTTTGCCTCTTCTACAACTGCACAACCAATACTGACGCCACGGGTATTAGTCTTCATCATAATAATTTCTTGCAGGGATAGGATAGCTCTTATCAAATGCATATTGTAGTTATCCTATTCCTTGTATGAAACTGGTTGGAATCATTGGACACCCAGATAAAATAACATAATTTTCTCTTTTTCAAAACATTAAAATATGATCCTCAATTCTTTGATTTGTCTTTGCAGTCGTCTAAGTTAACTTGATCCATCATATTATTGTTAATTATACCTTCCTTAGTTTGTTACCTTTTGTGTTTAGATTGTCTTTCTTTCTGTGATGTTATTTTATTTTTGCACAATTGTCCTTCATTTCTGGATATTTTATTTTTTCTAGGCCTTAATGAAAGAGCTGGATGAGATGGAAAAGATAAATGCCAAACTATCTTCTGCAGTTGAAGAAGTTACCCTGGAGCACTGTAAAAAGAATGAGGTAATCTTTGAGAAAATAATTTCCTTTTCTCTCTTTCATAATCTTTGGTTTTCATTTACCAATAAATAAATAAATATATATATATATTTATGCTGTTTGGTCTAAGTCTACAAACTTTTCATTATATCAATCAGATGTCTGTTAGCTATATGAATTGCACAAAAATAATATCTTTTTGTCATTGGATATGAAATATTTTATGCTTTACAAACGGTTTTGATAACTAATAACTGAGATTCCTTCCCCCTATAGTCATTTAAAAGGATTTGGTTTATTTAGTCTATGTTTTATTTTGATACATGAGTTCACAAGTTAGGTCCCATTTGGTAACTATTTGATTTTGAAAATTAAGCCTATTTCCTCTCAATTTCTTATAGTAGTTTGCATCTTTCTTAAGTAAAAGAGTTGAATTATTAGCTAAATTCTAAAGACAAAAGCAAGTTTTTAAAAACTACTTTTTTTAGTTTTCAAAACTTGACTTGGTTTTGTAAAACATTTTCAGAAAGTAGATAAAAAAACAAAAAATGTAGAAGTGAAAGAGGTGTTTATAGGCTTAATTTTAAAAAAACTAAAACTAAAAAATCAAATGGTTATCAAACGATGCTTTAGTGTCTAGCTTGAATAGTGACTTTTGGAAGTTTGAGTTAATGTAACTAAGTCAAAGCAGTCCTTGGATTAGCAAACATATGATATGATGCAGAAGTAAATCTTCTTACCAAATTTAAGATCAACTTTTGCCAATCTAAACAAAGCTCAACTGGTTAAGGCGTATACCTTCAATTAAGACGTTAGAGGTTCGAATTTTCCCCCTACCCCACATGTTGTATTAGTCAACTTCTAGCCAAACATCTAGCAAGAATTTCTGTTAGTACTTTTATGAAAAATGTGAAAAGGAGGTGCAGCTGTACAATGTAAATTGAACATTCCAATCCTTGCACTTTGGTTATACATTACAGTCTCAACAGGTCTGACTTTCATTCTACTCTGCCATGCAGATTGTCAAACATCATTCTCAGGAAGTAGGGCTACAACGTCGAGTTTTCGTTGACTTCTTTTGCAATCCTGAACGTCTCAGGAGTCAAGTTCGGGAACTGACTGCTCGAGTTAGAGCATTGCAAGCCTCATAGTTGACGTCTTTTGTATGTATATATATATATTGTTTCTTTCCCATTGCTTTGTTTGTATGTAACTGTTTACAATACATCACATGGCCATATGGGGATGCTTAATTGTAAAAGGAAGGTTATAGGTTTTTAATGACACAGATGATCTGTTTTGGTAGTGTTAAATCATAGTTCCACTTAAGAGTGTTTGATATTTTACC ATGGATATCCAGGCTGGAGTATCAACTTATGTGTCTGCTCCCGGCATTATTCAACAGATATCTAGTCTTCATTCAGACTTGAGAACCCTTCAATCTGATCTTGAAAACTCCCTCCCAGGCGACAGAAACAGATGCATCAATGATCTGTGCTCTCTTATTCAAAGTTTGCAGCAATTACTCTTTGCCTCTTCTACAACTGCACAACCAATACTGACGCCACGGGCCTTAATGAAAGAGCTGGATGAGATGGAAAAGATAAATGCCAAACTATCTTCTGCAGTTGAAGAAGTTACCCTGGAGCACTGTAAAAAGAATGAGATTGTCAAACATCATTCTCAGGAAGTAGGGCTACAACGTCGAGTTTTCGTTGACTTCTTTTGCAATCCTGAACGTCTCAGGAGTCAAGTTCGGGAACTGACTGCTCGAGTTAGAGCATTGCAAGCCTCATAGTTGACGTCTTTTGTATGTATATATATATATTGTTTCTTTCCCATTGCTTTGTTTGTATGTAACTGTTTACAATACATCACATGGCCATATGGGGATGCTTAATTGTAAAAGGAAGGTTATAGGTTTTTAATGACACAGATGATCTGTTTTGGTAGTGTTAAATCATAGTTCCACTTAAGAGTGTTTGATATTTTACC ATGGATATCCAGGCTGGAGTATCAACTTATGTGTCTGCTCCCGGCATTATTCAACAGATATCTAGTCTTCATTCAGACTTGAGAACCCTTCAATCTGATCTTGAAAACTCCCTCCCAGGCGACAGAAACAGATGCATCAATGATCTGTGCTCTCTTATTCAAAGTTTGCAGCAATTACTCTTTGCCTCTTCTACAACTGCACAACCAATACTGACGCCACGGGCCTTAATGAAAGAGCTGGATGAGATGGAAAAGATAAATGCCAAACTATCTTCTGCAGTTGAAGAAGTTACCCTGGAGCACTGTAAAAAGAATGAGATTGTCAAACATCATTCTCAGGAAGTAGGGCTACAACGTCGAGTTTTCGTTGACTTCTTTTGCAATCCTGAACGTCTCAGGAGTCAAGTTCGGGAACTGACTGCTCGAGTTAGAGCATTGCAAGCCTCATAG MDIQAGVSTYVSAPGIIQQISSLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINAKLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQAS Homology
BLAST of Lsi02G021690 vs. ExPASy Swiss-Prot
Match: Q0WQE7 (AUGMIN subunit 3 OS=Arabidopsis thaliana OX=3702 GN=AUG3 PE=1 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.7e-57 Identity = 118/146 (80.82%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Lsi02G021690 vs. ExPASy TrEMBL
Match: A0A6J1JL46 (AUGMIN subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111487928 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 9.7e-72 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. ExPASy TrEMBL
Match: A0A6J1DS91 (AUGMIN subunit 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023055 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 9.7e-72 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. ExPASy TrEMBL
Match: A0A6J1DPM8 (AUGMIN subunit 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023055 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 9.7e-72 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. ExPASy TrEMBL
Match: A0A5D3D231 (AUGMIN subunit 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002290 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71 Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Lsi02G021690 vs. ExPASy TrEMBL
Match: A0A1S3BGX4 (AUGMIN subunit 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489715 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71 Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Lsi02G021690 vs. NCBI nr
Match: XP_038899056.1 (AUGMIN subunit 3 [Benincasa hispida]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Lsi02G021690 vs. NCBI nr
Match: XP_022991202.1 (AUGMIN subunit 3 [Cucurbita maxima]) HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. NCBI nr
Match: XP_023548224.1 (AUGMIN subunit 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. NCBI nr
Match: KAG6576034.1 (AUGMIN subunit 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. NCBI nr
Match: XP_022156083.1 (AUGMIN subunit 3 isoform X1 [Momordica charantia]) HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lsi02G021690 vs. TAIR 10
Match: AT5G48520.1 (unknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). ) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-58 Identity = 118/146 (80.82%), Postives = 130/146 (89.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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