Lsi02G015490 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G015490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ring finger protein, putative
Location	chr02: 21345539 .. 21346663 (+)
RNA-Seq Expression	Lsi02G015490
Synteny	Lsi02G015490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGGATTCGGCATCAAATCTTTCAAAAGGATGGGTTTTTGAGCTACCCTCCTCCTTTGGCTACTTCTTCTTCATCCCCTTTTGATGGAATTTACAATAAGGAACCAACCCCACCAGCAGTGTCATCTGCAACCTCGTCTGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTTATTTTGGCTGTTTTGTTTTTCATCTCTGGTCTGCTTCATCTTCTTGTTAGATTCCTTATAAAGCACCCATCTTCCTCAGCCTCCTCTCAATCTAACAGAAACCCAGAACTTTCTCCTTCTGATGCACTTCAGAGACAGCTTCAGCAGCTATTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGATGCACTTCCTGTTTTTCAGTATAAAGAAATTGTGGGACTCAAGGAGCCATTTGATTGTGCTGTTTGTTTGTGTGAGTTTTCTGAGAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCCTTCCATGTCAATTGTATAGACACTTGGCTCTTGTCGAATTCGACATGTCCTCTTTGTCGAGGAACTCTCTTTAATCCTGGTTTTTCTATGGAAAATCCGATGTATGATTTCGACGATCTGGGAGAAGAAGATGAATATGCTGGTAATGCAGACCACAGGTTGCCTAATTGTCAGAAAACAATGGAAATTCAAGAGGTAGTGAATGAGAAGGGGGTTTTCCCAGTGAGACTAGGAAAATTCAGGCGGACGGATGTGGTGGAGGCTGTAGAGACTGAAGTTGGAGAGACCAGTAGTAGTAATTTGGATGCTAGGAGATGTTATTCGATGGGATCGTATCAATACGTTGTTATAGACGCTGACCTCAGAATTGCCTTGTCGAAAGCTCGACGAGAGGGTGATAATAAACAGCCCTCTAAAGAGACAGAATCAAACAGCATCTCTCCAGTCCAAGCAGATTTGGATGGAAAGAAGCTTAATAGTGTAGCTAAAGGAGAGAGTTATTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGTACTCGAGTTCTACTGAACCGCAGATAGGTATGCCTTCTTCTCTAAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATGA

mRNA sequence

ATGGCTCGGATTCGGCATCAAATCTTTCAAAAGGATGGGTTTTTGAGCTACCCTCCTCCTTTGGCTACTTCTTCTTCATCCCCTTTTGATGGAATTTACAATAAGGAACCAACCCCACCAGCAGTGTCATCTGCAACCTCGTCTGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTTATTTTGGCTGTTTTGTTTTTCATCTCTGGTCTGCTTCATCTTCTTGTTAGATTCCTTATAAAGCACCCATCTTCCTCAGCCTCCTCTCAATCTAACAGAAACCCAGAACTTTCTCCTTCTGATGCACTTCAGAGACAGCTTCAGCAGCTATTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGATGCACTTCCTGTTTTTCAGTATAAAGAAATTGTGGGACTCAAGGAGCCATTTGATTGTGCTGTTTGTTTGTGTGAGTTTTCTGAGAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCCTTCCATGTCAATTGTATAGACACTTGGCTCTTGTCGAATTCGACATGTCCTCTTTGTCGAGGAACTCTCTTTAATCCTGGTTTTTCTATGGAAAATCCGATGTATGATTTCGACGATCTGGGAGAAGAAGATGAATATGCTGGTAATGCAGACCACAGGTTGCCTAATTGTCAGAAAACAATGGAAATTCAAGAGGTAGTGAATGAGAAGGGGGTTTTCCCAGTGAGACTAGGAAAATTCAGGCGGACGGATGTGGTGGAGGCTGTAGAGACTGAAGTTGGAGAGACCAGTAGTAGTAATTTGGATGCTAGGAGATGTTATTCGATGGGATCGTATCAATACGTTGTTATAGACGCTGACCTCAGAATTGCCTTGTCGAAAGCTCGACGAGAGGGTGATAATAAACAGCCCTCTAAAGAGACAGAATCAAACAGCATCTCTCCAGTCCAAGCAGATTTGGATGGAAAGAAGCTTAATAGTGTAGCTAAAGGAGAGAGTTATTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGTACTCGAGTTCTACTGAACCGCAGATAGGTATGCCTTCTTCTCTAAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATGA

Coding sequence (CDS)

ATGGCTCGGATTCGGCATCAAATCTTTCAAAAGGATGGGTTTTTGAGCTACCCTCCTCCTTTGGCTACTTCTTCTTCATCCCCTTTTGATGGAATTTACAATAAGGAACCAACCCCACCAGCAGTGTCATCTGCAACCTCGTCTGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTTATTTTGGCTGTTTTGTTTTTCATCTCTGGTCTGCTTCATCTTCTTGTTAGATTCCTTATAAAGCACCCATCTTCCTCAGCCTCCTCTCAATCTAACAGAAACCCAGAACTTTCTCCTTCTGATGCACTTCAGAGACAGCTTCAGCAGCTATTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGATGCACTTCCTGTTTTTCAGTATAAAGAAATTGTGGGACTCAAGGAGCCATTTGATTGTGCTGTTTGTTTGTGTGAGTTTTCTGAGAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCCTTCCATGTCAATTGTATAGACACTTGGCTCTTGTCGAATTCGACATGTCCTCTTTGTCGAGGAACTCTCTTTAATCCTGGTTTTTCTATGGAAAATCCGATGTATGATTTCGACGATCTGGGAGAAGAAGATGAATATGCTGGTAATGCAGACCACAGGTTGCCTAATTGTCAGAAAACAATGGAAATTCAAGAGGTAGTGAATGAGAAGGGGGTTTTCCCAGTGAGACTAGGAAAATTCAGGCGGACGGATGTGGTGGAGGCTGTAGAGACTGAAGTTGGAGAGACCAGTAGTAGTAATTTGGATGCTAGGAGATGTTATTCGATGGGATCGTATCAATACGTTGTTATAGACGCTGACCTCAGAATTGCCTTGTCGAAAGCTCGACGAGAGGGTGATAATAAACAGCCCTCTAAAGAGACAGAATCAAACAGCATCTCTCCAGTCCAAGCAGATTTGGATGGAAAGAAGCTTAATAGTGTAGCTAAAGGAGAGAGTTATTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGTACTCGAGTTCTACTGAACCGCAGATAGGTATGCCTTCTTCTCTAAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATGA

Protein sequence

MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFPVRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDNKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSSLNTDLPWLRQTQGP

Homology

[Close]

BLAST of Lsi02G015490 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 4.3e-118
Identity = 241/388 (62.11%), Postives = 285/388 (73.45%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           M+ +R  I QKDG  +YPPP         D I +    PP      SSG RISPAVLF+I
Sbjct: 1   MSWVRFTIEQKDGNFAYPPPFYK------DPILSPPSPPP-----PSSGNRISPAVLFVI 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS++ASS+SNR PE+S SDALQRQLQQLFHL+DSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLD 120

Query: 121 QAFIDALPVFQYKEIVG----------LKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVN 180
           QAFIDALPVF YKEIVG           +EPFDCAVCLCEFSEKD+LRLLPMCSHAFH+N
Sbjct: 121 QAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLN 180

Query: 181 CIDTWLLSNSTCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQ 240
           CIDTWL SNSTCPLCRGTLF+PGFSMENPM+DFDD+ E++E  G  ++     QKTMEIQ
Sbjct: 181 CIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEE--GVTEN---GSQKTMEIQ 240

Query: 241 EVVNEKGVFPVRLGKFRRTDVVEAVETE----VGETSSSNLDARRCYSMGSYQYVVIDAD 300
           E+V EKGV PVRLGKF+R D V   + +     GETSSSNLDARRC+SMGSYQY++ +++
Sbjct: 241 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 300

Query: 301 LRIALSKARREGDNKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGK 360
           L++  +  R     K   KE+E    S  +   D KK+N+VAKGES+SVSKIWLW KK K
Sbjct: 301 LKVPFANDRLP-RLKPQDKESEQTGNSSSE---DNKKINTVAKGESFSVSKIWLWPKKDK 360

Query: 361 YSSSTEPQIGMPSSLNTD----LPWLRQ 371
           +SS  + ++   SSLN D    LPW+ +
Sbjct: 361 FSSDAQRRL-PSSSLNVDDLPKLPWMEE 367

[Close]

BLAST of Lsi02G015490 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.0e-87
Identity = 194/371 (52.29%), Postives = 237/371 (63.88%), Query Frame = 0


Query: 3   RIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFIIVI 62
           RI +   + D      P     SS+P     N + T  + SS++    RISP +LFIIV+
Sbjct: 5   RIHYSQLKNDNLNQISP-----SSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVL 64

Query: 63  LAVLFFISGLLHLLVRFLIKHPSSSASS---QSNRNPELSPSDALQRQLQQLFHLHDSGL 122
           L+V+FFI  +LHLLVR+ +K   S+ SS   +SN+NPE S SD  QRQLQQLFHLHDSGL
Sbjct: 65  LSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL 124

Query: 123 DQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSN 182
           DQA IDALPVF YKEI G KEPFDCAVCLCEFSE D+LRLLP CSHAFH++CIDTWLLSN
Sbjct: 125 DQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSN 184

Query: 183 STCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNE--KG 242
           STCPLCRGTLF+ G   E P ++F     +D   G    R+   QK  E     NE  K 
Sbjct: 185 STCPLCRGTLFSLGHQFEYPDFNFGFFAGDD---GGGGVRVSPVQKPAE-----NEIGKR 244

Query: 243 VFPVRLGKFRRTDVVEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDADLRIALSKA 302
           VF VRLGKFR +++V   E  V   GETSSS+LD RRC+SMGSYQY+V ++DL +AL   
Sbjct: 245 VFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALC-- 304

Query: 303 RREGDNKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKK-----GKYSS 361
                   P+ E   N+      D++GKK+N  +KGES+SVSKIW WS K       + S
Sbjct: 305 --------PNNEGLKNN-----KDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPS 347

[Close]

BLAST of Lsi02G015490 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 5.4e-60
Identity = 157/400 (39.25%), Postives = 209/400 (52.25%), Query Frame = 0


Query: 7   QIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFIIVILAVL 66
           Q F     L   PPL+  SS+ FD                   ++ISP++L II+IL+++
Sbjct: 19  QNFLSPSSLPQEPPLSLRSSANFD-----------------LNSKISPSILLIIIILSII 78

Query: 67  FFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDA 126
           FFISGLLHLLVRFL+        S  +R        ALQ QLQQLFHLHDSG+DQ+FID 
Sbjct: 79  FFISGLLHLLVRFLL------TPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT 138

Query: 127 LPVFQYKEIVGLKE-PFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLC 186
           LPVF YK I+GLK  PFDCAVCLCEF  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 139 LPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLC 198

Query: 187 RGTLFNPGFSMENPMYDF------------------------------------------ 246
           R +L +   S ++P   F                                          
Sbjct: 199 RSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVG 258

Query: 247 -DDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFPVRLGKFRRTDVVEAVETEVGET 306
            +DLG     +G+ D  L       E+   V +   F V+LGKFR  D+ E   +     
Sbjct: 259 NNDLGSTRIDSGHGDQYLDG-----ELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIG 318

Query: 307 SSSNLDARRCYSMGSYQYVV-IDADLRIALSKARREGDNK-QPSKETESN---------- 349
           +SS+LD RRC+SMGSY+Y++  +  L++ +S  ++   N+  P   T  +          
Sbjct: 319 NSSSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRL 378

[Close]

BLAST of Lsi02G015490 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.3e-57
Identity = 150/356 (42.13%), Postives = 208/356 (58.43%), Query Frame = 0


Query: 32  IYNKEPTPPAV-----SSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSS 91
           + +  P PP +     +S ++  ++I+P +L II+IL+++FFISGLLH+LV+FL+     
Sbjct: 14  LISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL----- 73

Query: 92  SASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLK-EPFDCA 151
              S+ +R        ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK  PFDC 
Sbjct: 74  -TPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCP 133

Query: 152 VCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSMENPMYDFDD 211
           VCLCEF  +D+LRLLP CSHAFHV CIDTWLLS+STCPLCR  L + GFS  + +     
Sbjct: 134 VCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSHHNLSSSYL 193

Query: 212 LGEEDE-----------------YAGNADH---RLPNCQKTME---IQEVVNEKGV-FPV 271
           L  E E                 Y  N D    R+ + +K+ +     + ++EK V   V
Sbjct: 194 LVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEV 253

Query: 272 RLGKFRRTD-VVEAVETEVGETS--SSNLDARRCYSMGSYQYVV-IDADLRIALSKARRE 331
           +LGKFR  D V E  + +    S  S N+D RRC SMGSY+Y++  +A L++ +S  +  
Sbjct: 254 KLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLS 313

Query: 332 GDNKQPSKETESN--SISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSST 352
           G ++ PS  T  +     P    ++     SV + ES+S+SKIWL  KK K   ++
Sbjct: 314 GKDRVPSHRTVMSECGFDPTVKGIE----KSVVERESFSLSKIWLRGKKEKQKGTS 358

[Close]

BLAST of Lsi02G015490 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 9.3e-44
Identity = 117/278 (42.09%), Postives = 160/278 (57.55%), Query Frame = 0


Query: 32  IYNKEPTPPAVSSATS---------SGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIK 91
           I+  E   P  SSA +         S + I   +  +I  LA++    G+L+L+ +FL K
Sbjct: 87  IHETEALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRK 146

Query: 92  HPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEI-VGLKEP 151
             +       N NP+L    +   QLQ LF LHDSGLDQ  IDALPVF Y  + + L++P
Sbjct: 147 SSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 206

Query: 152 FDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSMENPMY 211
           FDCAVCL EFS+ D+LRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L     S  N  Y
Sbjct: 207 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL-----STSNVCY 266

Query: 212 DFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFPVRLGKFRRTDVVEAVETEVGE 271
           +      E   A  + H      + ++  +    K VF VRLG+F+ T+  ++   +V +
Sbjct: 267 NH----SETLVAPLSGH------QQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHDVKD 326

Query: 272 TSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGD 300
                +  RRCYSMG+ QY+V D D  +ALS + REG+
Sbjct: 327 EIGVRM-PRRCYSMGTQQYLVCDQDFVVALSSSPREGN 346

[Close]

BLAST of Lsi02G015490 vs. ExPASy TrEMBL
Match: A0A5A7T7E5 (RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00820 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 1.8e-199
Identity = 354/375 (94.40%), Postives = 360/375 (96.00%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ DGF SYPPPLA SSS+PFDGIYNKEP PPAV S +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPMYDFDDLGEEDE AGNA+HRLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR D  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGDN
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
           KQPSKE ESNSISPVQADLDGKKL+SVAKGESYSVSKIWLWSKKGK+S STEPQIGMPSS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 375
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Lsi02G015490 vs. ExPASy TrEMBL
Match: A0A1S3C9T4 (RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103498060 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 1.8e-199
Identity = 354/375 (94.40%), Postives = 360/375 (96.00%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ DGF SYPPPLA SSS+PFDGIYNKEP PPAV S +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPMYDFDDLGEEDE AGNA+HRLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR D  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGDN
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
           KQPSKE ESNSISPVQADLDGKKL+SVAKGESYSVSKIWLWSKKGK+S STEPQIGMPSS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 375
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Lsi02G015490 vs. ExPASy TrEMBL
Match: A0A0A0KX50 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G630880 PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 3.1e-199
Identity = 354/375 (94.40%), Postives = 358/375 (95.47%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ DGF SYPPPLA SSS+PFDGIYNKEP PPAV S TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFS+KDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSDKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPMYDFDDLGEEDE AGNADHRLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNADHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR D  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGDN
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
            QPSKE ESNSISPVQADLDGKKL+SVAKGESYSVSKIWLWSKKGKYS STEP IGMPSS
Sbjct: 301 TQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKYSGSTEPHIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 375
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Lsi02G015490 vs. ExPASy TrEMBL
Match: A0A6J1C1A7 (RING-H2 finger protein ATL46 OS=Momordica charantia OX=3673 GN=LOC111006517 PE=4 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 2.7e-195
Identity = 346/374 (92.51%), Postives = 356/374 (95.19%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MA IRHQIFQKDGFLSYPPP+A SSSSPF G YNKEPTPPA SSATSSGTRISPAVLFII
Sbjct: 1   MAPIRHQIFQKDGFLSYPPPMADSSSSPFVGTYNKEPTPPASSSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFH+NCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHINCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPM+DFDDLG+EDE +GNAD R P CQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDDLGDEDECSGNADRRFPTCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR +  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN
Sbjct: 241 VRLGKFRRMNPAEPVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
           KQ SK+ E NSISPVQADLDGKKLNSV KGESYSVSKIWLWSKKGK++SSTEPQIGMPSS
Sbjct: 301 KQLSKDXEPNSISPVQADLDGKKLNSVVKGESYSVSKIWLWSKKGKFASSTEPQIGMPSS 360

Query: 361 LNTDLPWLRQTQGP 375
           LN DLPWLRQTQGP
Sbjct: 361 LNMDLPWLRQTQGP 374

[Close]

BLAST of Lsi02G015490 vs. ExPASy TrEMBL
Match: A0A6J1K0N9 (RING-H2 finger protein ATL46 OS=Cucurbita maxima OX=3661 GN=LOC111489561 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 9.5e-193
Identity = 346/375 (92.27%), Postives = 355/375 (94.67%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ D FLSYPPP+ TSSS+PFDGIYNKEP PPAV S TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDAFLSYPPPVMTSSSTPFDGIYNKEPNPPAVPSTTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS+S SSQSNRNP+LSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSTSPSSQSNRNPQLSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPG+S+ENPMYDFDDLGEEDE  GNAD+RLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGYSIENPMYDFDDLGEEDECGGNADYRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVE-TEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGD 300
           VRLGKFRR + VEA E TEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGD
Sbjct: 241 VRLGKFRRMNAVEAEETTEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGD 300

Query: 301 NKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQ--IGM 360
           NKQP K T+SNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEP   IGM
Sbjct: 301 NKQPCKGTDSNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPSQPIGM 360

Query: 361 PSSLNTDLPWLRQTQ 373
            SSLNTDLPWLRQTQ
Sbjct: 361 SSSLNTDLPWLRQTQ 375

[Close]

BLAST of Lsi02G015490 vs. NCBI nr
Match: XP_008458745.1 (PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo] >KAA0037501.1 RING-H2 finger protein ATL46 [Cucumis melo var. makuwa] >TYK01976.1 RING-H2 finger protein ATL46 [Cucumis melo var. makuwa])

HSP 1 Score: 704.9 bits (1818), Expect = 3.7e-199
Identity = 354/375 (94.40%), Postives = 360/375 (96.00%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ DGF SYPPPLA SSS+PFDGIYNKEP PPAV S +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPMYDFDDLGEEDE AGNA+HRLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR D  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGDN
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
           KQPSKE ESNSISPVQADLDGKKL+SVAKGESYSVSKIWLWSKKGK+S STEPQIGMPSS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 375
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Lsi02G015490 vs. NCBI nr
Match: XP_004142353.1 (RING-H2 finger protein ATL46 [Cucumis sativus] >KGN52386.1 hypothetical protein Csa_007863 [Cucumis sativus])

HSP 1 Score: 704.1 bits (1816), Expect = 6.3e-199
Identity = 354/375 (94.40%), Postives = 358/375 (95.47%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ DGF SYPPPLA SSS+PFDGIYNKEP PPAV S TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFS+KDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSDKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPMYDFDDLGEEDE AGNADHRLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNADHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR D  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGDN
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
            QPSKE ESNSISPVQADLDGKKL+SVAKGESYSVSKIWLWSKKGKYS STEP IGMPSS
Sbjct: 301 TQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKYSGSTEPHIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 375
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Lsi02G015490 vs. NCBI nr
Match: XP_022134198.1 (RING-H2 finger protein ATL46 [Momordica charantia])

HSP 1 Score: 691.0 bits (1782), Expect = 5.5e-195
Identity = 346/374 (92.51%), Postives = 356/374 (95.19%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MA IRHQIFQKDGFLSYPPP+A SSSSPF G YNKEPTPPA SSATSSGTRISPAVLFII
Sbjct: 1   MAPIRHQIFQKDGFLSYPPPMADSSSSPFVGTYNKEPTPPASSSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFH+NCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHINCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPM+DFDDLG+EDE +GNAD R P CQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDDLGDEDECSGNADRRFPTCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR +  E VETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN
Sbjct: 241 VRLGKFRRMNPAEPVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIGMPSS 360
           KQ SK+ E NSISPVQADLDGKKLNSV KGESYSVSKIWLWSKKGK++SSTEPQIGMPSS
Sbjct: 301 KQLSKDXEPNSISPVQADLDGKKLNSVVKGESYSVSKIWLWSKKGKFASSTEPQIGMPSS 360

Query: 361 LNTDLPWLRQTQGP 375
           LN DLPWLRQTQGP
Sbjct: 361 LNMDLPWLRQTQGP 374

[Close]

BLAST of Lsi02G015490 vs. NCBI nr
Match: XP_023550828.1 (RING-H2 finger protein ATL46-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 689.5 bits (1778), Expect = 1.6e-194
Identity = 349/377 (92.57%), Postives = 358/377 (94.96%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ D FLSYPPP+ TSSS+PFDGIYNKEP PPAV S TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDAFLSYPPPVMTSSSTPFDGIYNKEPNPPAVPSTTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS+S SSQSNRNP+LSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSTSPSSQSNRNPQLSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPG+S+ENPMYDFDDLGEEDE  GNAD+RLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGYSIENPMYDFDDLGEEDECGGNADYRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVE-TEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGD 300
           VRLGKFRR + VEAVE TEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKAR EGD
Sbjct: 241 VRLGKFRRMNAVEAVETTEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGD 300

Query: 301 NKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQ--IGM 360
           NKQP K T+SNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEP   IGM
Sbjct: 301 NKQPCKGTDSNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPSQPIGM 360

Query: 361 PSSLNTDLPWLRQTQGP 375
            SSLNTDLPWLRQTQGP
Sbjct: 361 DSSLNTDLPWLRQTQGP 377

[Close]

BLAST of Lsi02G015490 vs. NCBI nr
Match: XP_038890513.1 (RING-H2 finger protein ATL46 isoform X1 [Benincasa hispida])

HSP 1 Score: 688.7 bits (1776), Expect = 2.7e-194
Identity = 345/356 (96.91%), Postives = 350/356 (98.31%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           MARIRHQIFQ DGFLSYPPPL TSSS+PFDGIYNKEPTPPAVSS TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFLSYPPPLGTSSSTPFDGIYNKEPTPPAVSSPTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFP 240
           TCPLCRGTLFNPGFS+ENPMYDFDDLGEEDE AGNADHRLPNCQKTMEIQEVVNEKGVFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNADHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VRLGKFRRTDVVEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300
           VRLGKFRR DV EAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN
Sbjct: 241 VRLGKFRRMDVAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300

Query: 301 KQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPQIG 357
           KQPSKETESNSISP+QADLDGKKL+SVAKGESYSVSKIWLWSKKGK+SSSTEPQIG
Sbjct: 301 KQPSKETESNSISPIQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSSSTEPQIG 356

[Close]

BLAST of Lsi02G015490 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 426.0 bits (1094), Expect = 3.1e-119
Identity = 241/388 (62.11%), Postives = 285/388 (73.45%), Query Frame = 0


Query: 1   MARIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFII 60
           M+ +R  I QKDG  +YPPP         D I +    PP      SSG RISPAVLF+I
Sbjct: 1   MSWVRFTIEQKDGNFAYPPPFYK------DPILSPPSPPP-----PSSGNRISPAVLFVI 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS++ASS+SNR PE+S SDALQRQLQQLFHL+DSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLD 120

Query: 121 QAFIDALPVFQYKEIVG----------LKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVN 180
           QAFIDALPVF YKEIVG           +EPFDCAVCLCEFSEKD+LRLLPMCSHAFH+N
Sbjct: 121 QAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLN 180

Query: 181 CIDTWLLSNSTCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQ 240
           CIDTWL SNSTCPLCRGTLF+PGFSMENPM+DFDD+ E++E  G  ++     QKTMEIQ
Sbjct: 181 CIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEE--GVTEN---GSQKTMEIQ 240

Query: 241 EVVNEKGVFPVRLGKFRRTDVVEAVETE----VGETSSSNLDARRCYSMGSYQYVVIDAD 300
           E+V EKGV PVRLGKF+R D V   + +     GETSSSNLDARRC+SMGSYQY++ +++
Sbjct: 241 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 300

Query: 301 LRIALSKARREGDNKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGK 360
           L++  +  R     K   KE+E    S  +   D KK+N+VAKGES+SVSKIWLW KK K
Sbjct: 301 LKVPFANDRLP-RLKPQDKESEQTGNSSSE---DNKKINTVAKGESFSVSKIWLWPKKDK 360

Query: 361 YSSSTEPQIGMPSSLNTD----LPWLRQ 371
           +SS  + ++   SSLN D    LPW+ +
Sbjct: 361 FSSDAQRRL-PSSSLNVDDLPKLPWMEE 367

[Close]

BLAST of Lsi02G015490 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-88
Identity = 194/371 (52.29%), Postives = 237/371 (63.88%), Query Frame = 0


Query: 3   RIRHQIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFIIVI 62
           RI +   + D      P     SS+P     N + T  + SS++    RISP +LFIIV+
Sbjct: 5   RIHYSQLKNDNLNQISP-----SSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVL 64

Query: 63  LAVLFFISGLLHLLVRFLIKHPSSSASS---QSNRNPELSPSDALQRQLQQLFHLHDSGL 122
           L+V+FFI  +LHLLVR+ +K   S+ SS   +SN+NPE S SD  QRQLQQLFHLHDSGL
Sbjct: 65  LSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL 124

Query: 123 DQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSN 182
           DQA IDALPVF YKEI G KEPFDCAVCLCEFSE D+LRLLP CSHAFH++CIDTWLLSN
Sbjct: 125 DQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSN 184

Query: 183 STCPLCRGTLFNPGFSMENPMYDFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNE--KG 242
           STCPLCRGTLF+ G   E P ++F     +D   G    R+   QK  E     NE  K 
Sbjct: 185 STCPLCRGTLFSLGHQFEYPDFNFGFFAGDD---GGGGVRVSPVQKPAE-----NEIGKR 244

Query: 243 VFPVRLGKFRRTDVVEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDADLRIALSKA 302
           VF VRLGKFR +++V   E  V   GETSSS+LD RRC+SMGSYQY+V ++DL +AL   
Sbjct: 245 VFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALC-- 304

Query: 303 RREGDNKQPSKETESNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKK-----GKYSS 361
                   P+ E   N+      D++GKK+N  +KGES+SVSKIW WS K       + S
Sbjct: 305 --------PNNEGLKNN-----KDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPS 347

[Close]

BLAST of Lsi02G015490 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-61
Identity = 157/400 (39.25%), Postives = 209/400 (52.25%), Query Frame = 0


Query: 7   QIFQKDGFLSYPPPLATSSSSPFDGIYNKEPTPPAVSSATSSGTRISPAVLFIIVILAVL 66
           Q F     L   PPL+  SS+ FD                   ++ISP++L II+IL+++
Sbjct: 19  QNFLSPSSLPQEPPLSLRSSANFD-----------------LNSKISPSILLIIIILSII 78

Query: 67  FFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDA 126
           FFISGLLHLLVRFL+        S  +R        ALQ QLQQLFHLHDSG+DQ+FID 
Sbjct: 79  FFISGLLHLLVRFLL------TPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT 138

Query: 127 LPVFQYKEIVGLKE-PFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLC 186
           LPVF YK I+GLK  PFDCAVCLCEF  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 139 LPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLC 198

Query: 187 RGTLFNPGFSMENPMYDF------------------------------------------ 246
           R +L +   S ++P   F                                          
Sbjct: 199 RSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVG 258

Query: 247 -DDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFPVRLGKFRRTDVVEAVETEVGET 306
            +DLG     +G+ D  L       E+   V +   F V+LGKFR  D+ E   +     
Sbjct: 259 NNDLGSTRIDSGHGDQYLDG-----ELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIG 318

Query: 307 SSSNLDARRCYSMGSYQYVV-IDADLRIALSKARREGDNK-QPSKETESN---------- 349
           +SS+LD RRC+SMGSY+Y++  +  L++ +S  ++   N+  P   T  +          
Sbjct: 319 NSSSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRL 378

[Close]

BLAST of Lsi02G015490 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 5.2e-58
Identity = 150/356 (42.13%), Postives = 208/356 (58.43%), Query Frame = 0


Query: 32  IYNKEPTPPAV-----SSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSS 91
           + +  P PP +     +S ++  ++I+P +L II+IL+++FFISGLLH+LV+FL+     
Sbjct: 14  LISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL----- 73

Query: 92  SASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLK-EPFDCA 151
              S+ +R        ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK  PFDC 
Sbjct: 74  -TPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCP 133

Query: 152 VCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSMENPMYDFDD 211
           VCLCEF  +D+LRLLP CSHAFHV CIDTWLLS+STCPLCR  L + GFS  + +     
Sbjct: 134 VCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSHHNLSSSYL 193

Query: 212 LGEEDE-----------------YAGNADH---RLPNCQKTME---IQEVVNEKGV-FPV 271
           L  E E                 Y  N D    R+ + +K+ +     + ++EK V   V
Sbjct: 194 LVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEV 253

Query: 272 RLGKFRRTD-VVEAVETEVGETS--SSNLDARRCYSMGSYQYVV-IDADLRIALSKARRE 331
           +LGKFR  D V E  + +    S  S N+D RRC SMGSY+Y++  +A L++ +S  +  
Sbjct: 254 KLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLS 313

Query: 332 GDNKQPSKETESN--SISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSST 352
           G ++ PS  T  +     P    ++     SV + ES+S+SKIWL  KK K   ++
Sbjct: 314 GKDRVPSHRTVMSECGFDPTVKGIE----KSVVERESFSLSKIWLRGKKEKQKGTS 358

[Close]

BLAST of Lsi02G015490 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 179.1 bits (453), Expect = 6.6e-45
Identity = 117/278 (42.09%), Postives = 160/278 (57.55%), Query Frame = 0


Query: 32  IYNKEPTPPAVSSATS---------SGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIK 91
           I+  E   P  SSA +         S + I   +  +I  LA++    G+L+L+ +FL K
Sbjct: 87  IHETEALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRK 146

Query: 92  HPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEI-VGLKEP 151
             +       N NP+L    +   QLQ LF LHDSGLDQ  IDALPVF Y  + + L++P
Sbjct: 147 SSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 206

Query: 152 FDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSMENPMY 211
           FDCAVCL EFS+ D+LRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L     S  N  Y
Sbjct: 207 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL-----STSNVCY 266

Query: 212 DFDDLGEEDEYAGNADHRLPNCQKTMEIQEVVNEKGVFPVRLGKFRRTDVVEAVETEVGE 271
           +      E   A  + H      + ++  +    K VF VRLG+F+ T+  ++   +V +
Sbjct: 267 NH----SETLVAPLSGH------QQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHDVKD 326

Query: 272 TSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGD 300
                +  RRCYSMG+ QY+V D D  +ALS + REG+
Sbjct: 327 EIGVRM-PRRCYSMGTQQYLVCDQDFVVALSSSPREGN 346

The following BLAST results are available for this feature:

BLAST of Lsi02G015490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL07	4.3e-118	62.11	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q8GW38	3.0e-87	52.29	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q940Q4	5.4e-60	39.25	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	7.3e-57	42.13	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q7X843	9.3e-44	42.09	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of Lsi02G015490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7E5	1.8e-199	94.40	RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C9T4	1.8e-199	94.40	RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103498060 PE=4 SV=1	[more]
A0A0A0KX50	3.1e-199	94.40	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G630880 P...	[more]
A0A6J1C1A7	2.7e-195	92.51	RING-H2 finger protein ATL46 OS=Momordica charantia OX=3673 GN=LOC111006517 PE=4...	[more]
A0A6J1K0N9	9.5e-193	92.27	RING-H2 finger protein ATL46 OS=Cucurbita maxima OX=3661 GN=LOC111489561 PE=4 SV...	[more]

BLAST of Lsi02G015490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458745.1	3.7e-199	94.40	PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo] >KAA0037501.1 RING-H2 fin...	[more]
XP_004142353.1	6.3e-199	94.40	RING-H2 finger protein ATL46 [Cucumis sativus] >KGN52386.1 hypothetical protein ...	[more]
XP_022134198.1	5.5e-195	92.51	RING-H2 finger protein ATL46 [Momordica charantia]	[more]
XP_023550828.1	1.6e-194	92.57	RING-H2 finger protein ATL46-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038890513.1	2.7e-194	96.91	RING-H2 finger protein ATL46 isoform X1 [Benincasa hispida]	[more]

BLAST of Lsi02G015490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40250.1	3.1e-119	62.11	RING/U-box superfamily protein	[more]
AT1G23980.1	2.2e-88	52.29	RING/U-box superfamily protein	[more]
AT4G30400.1	3.8e-61	39.25	RING/U-box superfamily protein	[more]
AT2G18650.1	5.2e-58	42.13	RING/U-box superfamily protein	[more]
AT3G48030.1	6.6e-45	42.09	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 144..185 e-value: 2.0E-6 score: 37.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 143..186 e-value: 9.5E-13 score: 48.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 144..186 score: 12.371254
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 119..191 e-value: 1.8E-21 score: 77.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..318
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 9..359
None	No IPR available	PANTHER	PTHR45768:SF36	RING-H2 FINGER PROTEIN ATL46-LIKE ISOFORM X1	coord: 9..359
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 143..186 e-value: 2.95773E-20 score: 81.1941
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 123..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G015490.1	Lsi02G015490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding