Lsi02G010370 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G010370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PHLOEM PROTEIN 2-LIKE A9-like
Location	chr02: 11005488 .. 11012029 (+)
RNA-Seq Expression	Lsi02G010370
Synteny	Lsi02G010370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAAGCAAAACAGAAAAAGAAAAGCTCCAATAATTAACTACAACCAAAACTGAATTTATCAACATAAGGACGTACAGCTCCAAAGCTGGAGATTTGTTCATCTTGGAAATCCATCCTAATGCCTTCCGATCCTCACTTTCGGGCTGATGTTCCCGTAAATAATTTTGAGGTAAGCTTCGAAAGCCGAATTTTTTTGGTCGTGTTTAGTAATTATTTCGTTTTTTGTTTTTGGTTTTTTAGTTTTAAAAATTAAGTCTATTTCTTCATATTTTCTTACCATGGTTTGGTTTGCATCTTCTTTGAATATGAGAGTTGAATTCTTAACAAATTCCAAAACTAAAAACAAATTTTAAAAAATTACTTTTTTTAGTTTTTAAAATTTGGCTTGATTTTTTAAAACATGAGTAAAAAGTAGATGAGAAAGCAACACAATTAGGAGTGGGAGAGGAGTATTTATAGGCTTAATTTTTATAACTAAAAATCAAAAACCAAACCGTTACTAAACGGAAACTTTGTTATATATTCATTTTCATTTCTATGTTTTGTTCAATTGTCATTTGACTCATATCTATTCGATTTATCATTTATATACTCAATTTATATATATATATATATATATATATATAATAGATTAAACTACTATTTTGGTCTTCTATACATTGAAGTTTGTTGTTCAATTTTAGTCCTTGCACTTTCAATAAATTTTAAATTCAATCATTTCAAAGTTAATTTTTACTGAAATTGGTTGAGTAATAATAATAACTTTCATGCATATATATATATATATATAGTATGTGAATATGTTTTCAAAATTTATAGTAAAAATATTAATAGATGACAAAAAAATCTAAAAATCAAGAATAAATTAGTATTATAGATTAAATTAAAGATTTAATGAAAGTACATAGACTAAAATTAGATAATTAAAGGTATAAGATCTAAAATTAAACAAATTTCAAAATATAGAGATAGAAAATGGTATCTTAATGTTTGCAATATTAATAGTGGCAACTATGTGTGATAATAGTAATTAATATGAAAAAAATGTCTCTAGGCTATATAATTTGTTATCTTTTTAGGCTATAATAAACTACCCTTTTGTTTTTATGCTTAATTGTATATATCAAGAAATAATTATATTAAACAAGTATTTTATTAAATTAATACATATTAATATTTTTCAATATTTTCAAATTCTTCCCAACCAACACAATTCTCAAAGTTTTTGTATCCAAATTTAAAGTTTTCAAATAGTTTGGTTATGTTCATACGATTTATTGGGTTTATAAAATTTAACAATAGACTTTGAGGTATAGTATTTATAATTTGGTTGAAATATAGTTTGTTGCGTTTGATATGCCTTTTACTATAGCCTTTCATTTAATGATTCACAATTTTTCAGGATAATAAATTCATAATTTATCCGAGGGCTCTAAATATTACATGGGGTAAAGATAAGCGATATTGGAACTTACCTTCTCGATACACGTAAGCTTCGGCTTTCTCATTTTTATCTAATCTATTATATTTTGATGGTCGTTTTCTTAGAAGTGAAATCCAAATTTAGTTTGTCAACCTAACATAATTTAACTAATTTAAGTATATACTTTTGATAGAAATTCTAATTAAAAAAAGAAAAAGAAAAAAGGAAATAAATTTAATGATAAAAAAATAAATCATTGATATTTTGTTCACTCTCACTTTAATGATAAAAATGGGAGAAAAAAGGAAAAGAAAAACAAATCTATCTTTTTACAAATCCCTTCTTGTGGTTAGTCCTATTATTGTTTTTTTAGAATGGTAGATAACCCGACTCTCGATGACTTACTAACAGAACGTTACTACATGCTTGCATAATTACGAAGTAAAATTCTTTAACAGGTGTAACACAAAAGCAAATGAATTTCATAAATAAATAACTTTTCAAAATAGTCTCTCAAAAACTCAAAGCTTCTGTTCAGGGTACCTTAATTACAAAAATAGCTAAAATAGAAATTTTTGAAAAATGGAAATAACAAATATGCTAAAAGTTCCAAAAGAAATTTAGATGACATAGACTGGCTTAGAAACATGAAAACTATACGAAAGCTACTTCTGGTCTCATGGCACTATCATAGATTCTTTTTGTCATGCGCTCAACGTGTCCTTGCCCTTACCTGAAAAATATAACATAAGAAAAGGGTGAGTATAAAAATACTCCGTAAATAACTCTATTACTGGGTCAGGTTATGCATTTATGTCCTTTAAATGCAACATGCTAGTGGGTCATGCACATTTCAACTTATCATACATAACTATCTGAGTGAACAATTAAACTCGTCCTATCGTAGGTGAGTTGTACCCACAACCTCTAGTGAATCCCGAGAGAAAACACATACCTCTAGTGATTTCCAAAGGAGACACGAATCTCTAGTGAATCCCAAAGGAGGATAACAACCTCTAGTGAATCCCGAAGGAACACAAATCTCTAGTGAATACACATCTACGAACAATAGAGTAATTATCACTAACATATACAATTGGCAACATATGTAAAGGTCCCACAATATAGAATCATAACATATCTCATGTAAACATTATCATACTCATAAATCTTCTTAGGTCATATAAATCACATACAAAACATATAATCAATCTTAGAAATCAACAACATCTTTCTAACCATATTGCCTGACACAAAGGTAGGTTACTTACCTCAATTTAAGCCAAAAAGTGCTAACACAGCAACCATCTCCACAAATTCCTGAATTAATAGCTAGAATAACGACCCAACTTAAATCAAAACTTTAGGGCCCAATTCCAATTTACAAAATCACCGAACGGTTACCCAAGGTATGCCTTGATCCAAAATTATTCCCAAATCGAGCGCAGAGATGCCGACCCACCTACAACCAACAATTAGGATTTTACAATAAAAAAAACAAATCTAGCCCAAAAAAACATTCCAAGAAGGCTCCAAGGGCTAAATACTCACCAAAGCCGATCTTTTACTATACTGGACAACGGCTTAAAACCTCGGCATCGTTGGGTCACCGTCGTTCGTGTTCGTGAAGCTGTCGGCAATCAATTTCTCCAAGCAGTGTCTTCTCGATTCGTCCACCGTCCGCCGCTAGCCACCTTTACGCCACCGGTCGCTGCCATGTGGTGGTGCCATTGTTGCCGAATTTTGAAGAGTGGGTGAGGATTGAGTGTTTTTGGGTAAATTTTGTGGACGTTTTGGTTTGATGTTGGTTGGTCATTGAATACCCTTTAAATGTTCGGAGCATGCTGTGACCTCTGCGGCGATGAGGCTTCACGAAGGAGGAGGAGAAGAAAAAGAAATCTTTTTTTAACCACGCATAACGAGGCTACTTCATAAATAAATATATATTTTACTCGTAAATAAAAACTGAGTTGTTTTCAAATATAGAAAAATGAGCAAAAACTACTTTTAAACATATAAAAATTTTACTGTCTATCAATAATAGAATTTTATTCTAGTTTATCGTTGGTACATAGTTAAATTTTTCTATATTTGTAAATAGTTTTGATATTTTTTCTATTTACAATAATTTTCCTAACTTAAATTAACTCAAATTTCTAAATCTCCTCTCATTTCAAATAAATTTTCGAGAAATTTTCACAAATAAAAAAAAATGTCAAACTATTTAAGTAAAATAGCAAAAAAAAAAATATACTGATATACATTGATAGACTTCTATCAGCATCTACTCTATCAGTGATAGACTGCATCTATAGTGATAGACCTCTATCAGCCTCTATCAGCATCTATAGTGATAGACCTCTATCAACATCTATCAGTGATAGACCTTTATTCTATCAGTGATAGATTTCTATCATTTCTATCACTGATAGATAAACTTCTATCAGCGTCTATCACAACTATTTAAAATTTTTGCTATTTTGTGTAAATAGTTTATCCTATTTTTCTATTTTTAAAACTTCTCCTAAACTTTCACCCATTGAACTAAATCAAAATTTTAAATCTTTATCACTTAACTTAATTGAATTATTTTAACTCCAATAATTTAATTTTAGTCCTAAAATTTAAAATAACAACTAAATAATTTATGATAATTATATTAAGATTACCAAAAACAAATTGGATGTCAAAATCCCTTATCATGTTTCACTCTATTCGAGAAGACAAAAGTTCTAATCCTCACGCCACATGTCAAATTCAAACAAAAGAAAAAGTTTATTTATTTTAATTCTATTGAACCTCATTATATTGAAAAATTAAAAAAATAAATAAACTGTCCTCTTGACCAATCCCTCTTTGTGTTTAGCTCTATTATTTTTTAGAGTGGTATCTATATACCCTCAATTACAAGAGGAGAGAAGTTCTCATCCTCACTCCATAGGTCAAATTTAAAAAAAAAAAAAAAAAAAAAAAAACACTTTTAATTCCTGAATTTTTTTTACTAAAATAATAATTTAGTCTCTAAACTTTAGTTGACAAATTCGTAACAATTTAATCCCTAACTTTTACTGTGTGACGATTTAGTTCTTATTGAAAAATTTTCATCAAAATTAAGTGTCAATTTTTATTACGTAAAACTTAGTATTTATAACTTATAACTAAGTTTAATTCACCGAACAAAGAAGTGTTTTTTAACCAATTATTCACTCTCAATTTATTGAATTTTGTAGTAGAAAAAAGCAAAAAGGAAAAGTAAATTAATTGTCTTATAATTATTCTTCTTTGTCCAACTATTTTCTTGACTTTTAGAGGGTATGAATTTGTAGGAAGAATGAAGAAAGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGTTCAACTGAGAAAGATCTTGTGCCTGGAAAAGAGTACAAAGTGGGCTTTAAGATATCACTAAGACCAGATGCTTTTGGATGGGATAATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGAAATTTCTCTTTCAAGAAAATAAGTCTTGCAGGCCTACCTACAAATCTCCTAAGGATTACCATTCCCAATAATGATGATAAGTTGATTATCAAAGTCCCTGGAGACAGAGAATCTAAACCCTCTGAAAATGATGATCTAAAGCTTTATTTTGGTCTCTATGAAGTTTGGACCAATGGATGGAAGGGAGGGTTGAGGATTCATCATGCATTTGTTGAGAGGTGTTACTGACTTCACCAATCAAAATACTCAATAAAAGTAAGGGGGAAAATGTGCATTTCCTCACAATTATTGGGATTCACCCAATATTGAATTATAAAAGGTATGTGATGATGGAACATGCAAGTAAATTCTTAATTTGGCATTGCCTTGAACAATCTAGGATCTCCTTGTGGGCTATTTTTATAGCTTAAATATGTGACTTTTTTTTTTTAAGATTACTTTATTCATGTGCATATCTATTCATTTTTGTGAAAATGAGTAGTATGTTATTCAATCAAGTGTTGTAATTTATAGTGAAATACATCCATGAGTTTATACACAAATCAAAAAATATAAAAGGAATATTTATAGTGAAATACATCCGCGACACTCTAAAGTTGATTTGTGGGTGATTTTCTGTCAGCGTCACGGTGTTGCAGTCATAATTTTATAAAAGTAAAATTTAGCTACTAAGTCATATCATCTGCCAATTCCAGCTGATTCAACCACGATTTCTCTCCATTTTCTTCATCTTTTGGGCATGTTCATGTATCTAAATGTTCCCTTGATGTCCAACATGTTGATTATGGGCTAAAGGTAATGTTTCTAGCTTAGGCACTGAGTATTTGTCCCGTAATTGCACACTTGTGAGATTTCTTGCTTTTTGTAATTTTCTGTATTGTTGACAATTTTTTTTTAGTTTATGAATGATCCACGATTATATTTCTGCTTATGTTATGTAATCAATCGCTAAGGTTTAATTTGCAACGCGTGACATTGAATTTCATGTTAATCCGACGTAACAATGGGTTTAATTAGCTTGTAGGTTGTAAATCTATCGCAACGAACATTGCCTAATTAACCTAGGGAAGAATTAATTTGCATGTTTATTTGGCTTTTCCAATTGAGCATTCGACTTGGTGATTTCCTCGATCTTAATCCATTAGCTAAACTAGTAGGATGCTTCTCATCTATTAATTTAGTTAATTTCATGATTTGGACCCTAACCTAGCTTTTCTAGGTGAGGTGGCTAAGGTAGATAATATAGGGGGTGTTTGGCCCAAGGAGTTGGGAAGAGTAGGAGTAGGGAAGTAGGAGTTTGTGACTCCAACTCTTTGTTTGGCCAAGGAGTTGGTAGATCCTACTACTAAAAGAATATCAATTTTATATCTTATTAACATCTTACACTGTGGGTCCTAGGAGTTTACAACTCCCTAGATTTCATAACTTCTTACTCTTCACTATTCTACTCCTTACCCCAAACACCCCCGTAGGGATAATTTGATAATCTGTGATCAAGATAGAAAATTGGGGAAACAACTCGAAAGCCTAAGCTAGATACACTGCAAGAAATTTGGGCTTTGATGTGGGTTGGAAAAACTAAAAACAGATGTACAATGTCGGTTTCTT

mRNA sequence

ACAAAGCAAAACAGAAAAAGAAAAGCTCCAATAATTAACTACAACCAAAACTGAATTTATCAACATAAGGACGTACAGCTCCAAAGCTGGAGATTTGTTCATCTTGGAAATCCATCCTAATGCCTTCCGATCCTCACTTTCGGGCTGATGTTCCCGTAAATAATTTTGAGGATAATAAATTCATAATTTATCCGAGGGCTCTAAATATTACATGGGGTAAAGATAAGCGATATTGGAACTTACCTTCTCGATACACGCTCCAAGGGCTAAATACTCACCAAAGCCGATCTTTTACTATACTGGACAACGGCTTAAAACCTCGGCATCGTTGGGTCACCGTCGTTCGTGTTCGTGAAGCTGTCGGCAATCAATTTCTCCAAGCAGTGTCTTCTCGATTCGTCCACCGTCCGCCGCTAGCCACCTTTACGCCACCGGTCGCTGCCATGTGGTGGTGCCATTGTTGCCGAATTTTGAAGAGTGGGAAGAATGAAGAAAGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGTTCAACTGAGAAAGATCTTGTGCCTGGAAAAGAGTACAAAGTGGGCTTTAAGATATCACTAAGACCAGATGCTTTTGGATGGGATAATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGAAATTTCTCTTTCAAGAAAATAAGTCTTGCAGGCCTACCTACAAATCTCCTAAGGATTACCATTCCCAATAATGATGATAAGTTGATTATCAAAGTCCCTGGAGACAGAGAATCTAAACCCTCTGAAAATGATGATCTAAAGCTTTATTTTGGTCTCTATGAAGTTTGGACCAATGGATGGAAGGGAGGGTTGAGGATTCATCATGCATTTGTTGAGAGGTGTTACTGACTTCACCAATCAAAATACTCAATAAAAGTAAGGGGGAAAATGTGCATTTCCTCACAATTATTGGGATTCACCCAATATTGAATTATAAAAGCTGATTCAACCACGATTTCTCTCCATTTTCTTCATCTTTTGGGCATGTTCATGTATCTAAATGTTCCCTTGATGTCCAACATGTTGATTATGGGCTAAAGGTAATGTTTCTAGCTTAGGCACTGAGTATTTGTCCCGTAATTGCACACTTGTGAGATTTCTTGCTTTTTGTAATTTTCTGTATTGTTGACAATTTTTTTTTAGTTTATGAATGATCCACGATTATATTTCTGCTTATGTTATGTAATCAATCGCTAAGGTTTAATTTGCAACGCGTGACATTGAATTTCATGTTAATCCGACGTAACAATGGGTTTAATTAGCTTGTAGGTTGTAAATCTATCGCAACGAACATTGCCTAATTAACCTAGGGAAGAATTAATTTGCATGTTTATTTGGCTTTTCCAATTGAGCATTCGACTTGGTGATTTCCTCGATCTTAATCCATTAGCTAAACTAGTAGGATGCTTCTCATCTATTAATTTAGTTAATTTCATGATTTGGACCCTAACCTAGCTTTTCTAGGTGAGGTGGCTAAGGTAGATAATATAGGGGGTGTTTGGCCCAAGGAGTTGGGAAGAGTAGGAGTAGGGAAGTAGGAGTTTGTGACTCCAACTCTTTGTTTGGCCAAGGAGTTGGTAGATCCTACTACTAAAAGAATATCAATTTTATATCTTATTAACATCTTACACTGTGGGTCCTAGGAGTTTACAACTCCCTAGATTTCATAACTTCTTACTCTTCACTATTCTACTCCTTACCCCAAACACCCCCGTAGGGATAATTTGATAATCTGTGATCAAGATAGAAAATTGGGGAAACAACTCGAAAGCCTAAGCTAGATACACTGCAAGAAATTTGGGCTTTGATGTGGGTTGGAAAAACTAAAAACAGATGTACAATGTCGGTTTCTT

Coding sequence (CDS)

ATGCCTTCCGATCCTCACTTTCGGGCTGATGTTCCCGTAAATAATTTTGAGGATAATAAATTCATAATTTATCCGAGGGCTCTAAATATTACATGGGGTAAAGATAAGCGATATTGGAACTTACCTTCTCGATACACGCTCCAAGGGCTAAATACTCACCAAAGCCGATCTTTTACTATACTGGACAACGGCTTAAAACCTCGGCATCGTTGGGTCACCGTCGTTCGTGTTCGTGAAGCTGTCGGCAATCAATTTCTCCAAGCAGTGTCTTCTCGATTCGTCCACCGTCCGCCGCTAGCCACCTTTACGCCACCGGTCGCTGCCATGTGGTGGTGCCATTGTTGCCGAATTTTGAAGAGTGGGAAGAATGAAGAAAGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGTTCAACTGAGAAAGATCTTGTGCCTGGAAAAGAGTACAAAGTGGGCTTTAAGATATCACTAAGACCAGATGCTTTTGGATGGGATAATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGAAATTTCTCTTTCAAGAAAATAAGTCTTGCAGGCCTACCTACAAATCTCCTAAGGATTACCATTCCCAATAATGATGATAAGTTGATTATCAAAGTCCCTGGAGACAGAGAATCTAAACCCTCTGAAAATGATGATCTAAAGCTTTATTTTGGTCTCTATGAAGTTTGGACCAATGGATGGAAGGGAGGGTTGAGGATTCATCATGCATTTGTTGAGAGGTGTTACTGA

Protein sequence

MPSDPHFRADVPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTILDNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKSGKNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKGNFSFKKISLAGLPTNLLRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNGWKGGLRIHHAFVERCY

Homology

[Close]

BLAST of Lsi02G010370 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-27
Identity = 65/132 (49.24%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 128 AELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKGNFSFK 187
           AELK V WLEVTGS +K + PGK Y++GFKIS +PDA GWD   V++ AKIGKKG   +K
Sbjct: 52  AELKMVSWLEVTGSFDK-IEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWK 111

Query: 188 KISLAGLPTNLLR-----ITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNGW 247
           +I        +L+     + IP+  D L   +     S  + N D KL FGLYEVWT  W
Sbjct: 112 RIKSVSQNFGILKGGSEPVNIPDESDGLFEIL----VSPTALNQDTKLQFGLYEVWTGRW 171

Query: 248 KGGLRIHHAFVE 255
           K GL IH AFV+
Sbjct: 172 KTGLLIHEAFVQ 178

[Close]

BLAST of Lsi02G010370 vs. ExPASy TrEMBL
Match: A0A1S3C8T6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498275 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 117/257 (45.53%), Postives = 136/257 (52.92%), Query Frame = 0


Query: 1   MPSDPHFRADVPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTI 60
           +PSDPHFRA+  V    DNKF +YPRALNITWG D+RYW +P R                
Sbjct: 11  IPSDPHFRANASVETCSDNKFKVYPRALNITWGNDRRYWTIPGR---------------- 70

Query: 61  LDNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKS 120
                 P +                                                   
Sbjct: 71  -----DPNN--------------------------------------------------Y 130

Query: 121 GKNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGK 180
            K+E  FAELKQVCWLEVTGS +KDLVPGK YK  F +SL PDAFGWD+CSVYIMAKIGK
Sbjct: 131 DKDENYFAELKQVCWLEVTGSIKKDLVPGKTYKASFGVSLSPDAFGWDDCSVYIMAKIGK 190

Query: 181 KGNFSFKKISLAGLPTNLLRIT---IPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEV 240
           KG+F  KK++L  +PT    +    IP   D LI++VP         +DDL LYFGLYEV
Sbjct: 191 KGHFHLKKMNLTTIPTTSTDVKISFIPTPGDDLIVQVP-----LTQPDDDLNLYFGLYEV 191

Query: 241 WTNGWKGGLRIHHAFVE 255
           WTN WKGGLRIH+A VE
Sbjct: 251 WTNRWKGGLRIHYALVE 191

[Close]

BLAST of Lsi02G010370 vs. ExPASy TrEMBL
Match: A0A0A0M0X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G709160 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 5.2e-49
Identity = 114/259 (44.02%), Postives = 136/259 (52.51%), Query Frame = 0


Query: 2   PSDPHFRADVPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTIL 61
           PSDPHFRA   VN   ++ F IYPRALNITWG D+RYW +P R                 
Sbjct: 12  PSDPHFRAVTSVNTIGEDTFKIYPRALNITWGSDRRYWTIPRRDR--------------- 71

Query: 62  DNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKSG 121
                                                                       
Sbjct: 72  --------------------------------------------------------TTDD 131

Query: 122 KNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKK 181
           ++E+ FAELKQVCWLEVTGST +DLVP K YKV F +SL PDAFGWD+CSVYIMAKIGKK
Sbjct: 132 EDEDYFAELKQVCWLEVTGSTNRDLVPEKTYKVSFGVSLGPDAFGWDDCSVYIMAKIGKK 191

Query: 182 GNFSFKKISLAGLPT------NLLRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLY 241
           GNF F+K++L  + T      +L+  T      +L + VP  R +  + NDDLKLYFGLY
Sbjct: 192 GNFRFQKVNLGIITTTTDPEISLIPFT------ELTVTVPTPRTN--NNNDDLKLYFGLY 191

Query: 242 EVWTNGWKGGLRIHHAFVE 255
           +VWTN WKGGLRIH+A VE
Sbjct: 252 DVWTNRWKGGLRIHYALVE 191

[Close]

BLAST of Lsi02G010370 vs. ExPASy TrEMBL
Match: A0A6J1CNK5 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012653 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42
Identity = 108/251 (43.03%), Postives = 130/251 (51.79%), Query Frame = 0


Query: 5   PHFRAD-VPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTILDN 64
           PH++ +       E NKF +YPR LNITWG+D RYW LP   TL                
Sbjct: 7   PHYKVNSTDAIKDEGNKFKLYPRGLNITWGRDSRYWQLPG-MTL---------------- 66

Query: 65  GLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKSGKN 124
                                                              CR+     +
Sbjct: 67  ---------------------------------------------------CRM-----D 126

Query: 125 EESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKGN 184
           E+S AELKQV WLEVTGST KD+V GKEYKVGF++SLRPDAFGW+   VYIMAKIGK+G 
Sbjct: 127 EDSVAELKQVAWLEVTGSTPKDVVIGKEYKVGFRVSLRPDAFGWEGREVYIMAKIGKRGT 180

Query: 185 FSFKKISLAGLPTNL-LRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNGW 244
            SFKK++  G    + L   IP  +DKL+I V     + PS  DD KLYFG+YEVW+  W
Sbjct: 187 VSFKKVNFEGKSQGMPLPFDIP--EDKLVITVTPKETAVPS--DDCKLYFGMYEVWSKMW 180

Query: 245 KGGLRIHHAFV 254
           KGGL+IHHAFV
Sbjct: 247 KGGLKIHHAFV 180

[Close]

BLAST of Lsi02G010370 vs. ExPASy TrEMBL
Match: A0A6J1K456 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490487 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 7.6e-40
Identity = 103/257 (40.08%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 3   SDPHFRADVPVNNFE---DNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFT 62
           S+PH RA+   NN +    NKF IYPR L+ITWG D RYW                    
Sbjct: 6   SNPHHRAE--SNNIKMEGKNKFKIYPRGLDITWGNDNRYW-------------------- 65

Query: 63  ILDNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILK 122
                                                                    +L 
Sbjct: 66  ---------------------------------------------------------MLS 125

Query: 123 SGKNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIG 182
             + E+SFAELKQV WLEVTGST K+L  G  +KV F ++LRP+AFGWD C+VYIMAKIG
Sbjct: 126 DMEAEDSFAELKQVNWLEVTGSTPKNLKIGAWFKVSFNVTLRPNAFGWDECNVYIMAKIG 177

Query: 183 KKGNFSFKKISLAGLPTNLLRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWT 242
           KKG++SFKK++L  +     R  IP+N+ K+ +  P     K    +DLKLYFG+YEVW+
Sbjct: 186 KKGHYSFKKLNL-NVKQPEGRFNIPHNELKIKVAKP-----KNGSEEDLKLYFGMYEVWS 177

Query: 243 NGWKGGLRIHHAFVERC 257
           N WKGGLRI+HA VE C
Sbjct: 246 NRWKGGLRIYHALVEEC 177

[Close]

BLAST of Lsi02G010370 vs. ExPASy TrEMBL
Match: A0A6J1CLV7 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012653 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.4e-38
Identity = 83/132 (62.88%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 123 NEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKG 182
           +E+S AELKQV WLEVTGST KD+V GKEYKVGF++SLRPDAFGW+   VYIMAKIGK+G
Sbjct: 7   DEDSVAELKQVAWLEVTGSTPKDVVIGKEYKVGFRVSLRPDAFGWEGREVYIMAKIGKRG 66

Query: 183 NFSFKKISLAGLPTNL-LRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNG 242
             SFKK++  G    + L   IP  +DKL+I V     + PS  DD KLYFG+YEVW+  
Sbjct: 67  TVSFKKVNFEGKSQGMPLPFDIP--EDKLVITVTPKETAVPS--DDCKLYFGMYEVWSKM 126

Query: 243 WKGGLRIHHAFV 254
           WKGGL+IHHAFV
Sbjct: 127 WKGGLKIHHAFV 134

[Close]

BLAST of Lsi02G010370 vs. NCBI nr
Match: XP_038896030.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 1.6e-63
Identity = 137/254 (53.94%), Postives = 156/254 (61.42%), Query Frame = 0


Query: 1   MPSDPHFRADVPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTI 60
           M  DPHF+AD P+ N E+NKF IYPRALNITWGKDKR+WNLP R T              
Sbjct: 1   MAPDPHFKADSPIKNIEENKFKIYPRALNITWGKDKRFWNLPHRDT-------------- 60

Query: 61  LDNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKS 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 GKNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGK 180
            +NE+SFAELKQVCWLEVTGSTEKD++  ++YKVGF ISLRPDAFGWD+CSVYIMAKIG+
Sbjct: 121 -RNEDSFAELKQVCWLEVTGSTEKDVLVEEKYKVGFVISLRPDAFGWDDCSVYIMAKIGR 173

Query: 181 KGNFSFKKISLAGLPTNLLRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTN 240
           +GN+SFKK+SLA LPT   RITIP +DD+LII+VP     KP +NDDLKLYFGLYEVWTN
Sbjct: 181 RGNYSFKKMSLAALPTG-KRITIP-DDDQLIIQVPA---FKP-DNDDLKLYFGLYEVWTN 173

Query: 241 GWKGGLRIHHAFVE 255
            WKGGLRIHHAFVE
Sbjct: 241 RWKGGLRIHHAFVE 173

[Close]

BLAST of Lsi02G010370 vs. NCBI nr
Match: XP_008459053.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 6.1e-52
Identity = 117/257 (45.53%), Postives = 136/257 (52.92%), Query Frame = 0


Query: 1   MPSDPHFRADVPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTI 60
           +PSDPHFRA+  V    DNKF +YPRALNITWG D+RYW +P R                
Sbjct: 11  IPSDPHFRANASVETCSDNKFKVYPRALNITWGNDRRYWTIPGR---------------- 70

Query: 61  LDNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKS 120
                 P +                                                   
Sbjct: 71  -----DPNN--------------------------------------------------Y 130

Query: 121 GKNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGK 180
            K+E  FAELKQVCWLEVTGS +KDLVPGK YK  F +SL PDAFGWD+CSVYIMAKIGK
Sbjct: 131 DKDENYFAELKQVCWLEVTGSIKKDLVPGKTYKASFGVSLSPDAFGWDDCSVYIMAKIGK 190

Query: 181 KGNFSFKKISLAGLPTNLLRIT---IPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEV 240
           KG+F  KK++L  +PT    +    IP   D LI++VP         +DDL LYFGLYEV
Sbjct: 191 KGHFHLKKMNLTTIPTTSTDVKISFIPTPGDDLIVQVP-----LTQPDDDLNLYFGLYEV 191

Query: 241 WTNGWKGGLRIHHAFVE 255
           WTN WKGGLRIH+A VE
Sbjct: 251 WTNRWKGGLRIHYALVE 191

[Close]

BLAST of Lsi02G010370 vs. NCBI nr
Match: XP_004151321.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66904.1 hypothetical protein Csa_007408 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-48
Identity = 114/259 (44.02%), Postives = 136/259 (52.51%), Query Frame = 0


Query: 2   PSDPHFRADVPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTIL 61
           PSDPHFRA   VN   ++ F IYPRALNITWG D+RYW +P R                 
Sbjct: 12  PSDPHFRAVTSVNTIGEDTFKIYPRALNITWGSDRRYWTIPRRDR--------------- 71

Query: 62  DNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKSG 121
                                                                       
Sbjct: 72  --------------------------------------------------------TTDD 131

Query: 122 KNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKK 181
           ++E+ FAELKQVCWLEVTGST +DLVP K YKV F +SL PDAFGWD+CSVYIMAKIGKK
Sbjct: 132 EDEDYFAELKQVCWLEVTGSTNRDLVPEKTYKVSFGVSLGPDAFGWDDCSVYIMAKIGKK 191

Query: 182 GNFSFKKISLAGLPT------NLLRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLY 241
           GNF F+K++L  + T      +L+  T      +L + VP  R +  + NDDLKLYFGLY
Sbjct: 192 GNFRFQKVNLGIITTTTDPEISLIPFT------ELTVTVPTPRTN--NNNDDLKLYFGLY 191

Query: 242 EVWTNGWKGGLRIHHAFVE 255
           +VWTN WKGGLRIH+A VE
Sbjct: 252 DVWTNRWKGGLRIHYALVE 191

[Close]

BLAST of Lsi02G010370 vs. NCBI nr
Match: XP_022142573.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Momordica charantia])

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-42
Identity = 108/251 (43.03%), Postives = 130/251 (51.79%), Query Frame = 0


Query: 5   PHFRAD-VPVNNFEDNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFTILDN 64
           PH++ +       E NKF +YPR LNITWG+D RYW LP   TL                
Sbjct: 7   PHYKVNSTDAIKDEGNKFKLYPRGLNITWGRDSRYWQLPG-MTL---------------- 66

Query: 65  GLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILKSGKN 124
                                                              CR+     +
Sbjct: 67  ---------------------------------------------------CRM-----D 126

Query: 125 EESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKGN 184
           E+S AELKQV WLEVTGST KD+V GKEYKVGF++SLRPDAFGW+   VYIMAKIGK+G 
Sbjct: 127 EDSVAELKQVAWLEVTGSTPKDVVIGKEYKVGFRVSLRPDAFGWEGREVYIMAKIGKRGT 180

Query: 185 FSFKKISLAGLPTNL-LRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNGW 244
            SFKK++  G    + L   IP  +DKL+I V     + PS  DD KLYFG+YEVW+  W
Sbjct: 187 VSFKKVNFEGKSQGMPLPFDIP--EDKLVITVTPKETAVPS--DDCKLYFGMYEVWSKMW 180

Query: 245 KGGLRIHHAFV 254
           KGGL+IHHAFV
Sbjct: 247 KGGLKIHHAFV 180

[Close]

BLAST of Lsi02G010370 vs. NCBI nr
Match: XP_022994899.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-39
Identity = 103/257 (40.08%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 3   SDPHFRADVPVNNFE---DNKFIIYPRALNITWGKDKRYWNLPSRYTLQGLNTHQSRSFT 62
           S+PH RA+   NN +    NKF IYPR L+ITWG D RYW                    
Sbjct: 6   SNPHHRAE--SNNIKMEGKNKFKIYPRGLDITWGNDNRYW-------------------- 65

Query: 63  ILDNGLKPRHRWVTVVRVREAVGNQFLQAVSSRFVHRPPLATFTPPVAAMWWCHCCRILK 122
                                                                    +L 
Sbjct: 66  ---------------------------------------------------------MLS 125

Query: 123 SGKNEESFAELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIG 182
             + E+SFAELKQV WLEVTGST K+L  G  +KV F ++LRP+AFGWD C+VYIMAKIG
Sbjct: 126 DMEAEDSFAELKQVNWLEVTGSTPKNLKIGAWFKVSFNVTLRPNAFGWDECNVYIMAKIG 177

Query: 183 KKGNFSFKKISLAGLPTNLLRITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWT 242
           KKG++SFKK++L  +     R  IP+N+ K+ +  P     K    +DLKLYFG+YEVW+
Sbjct: 186 KKGHYSFKKLNL-NVKQPEGRFNIPHNELKIKVAKP-----KNGSEEDLKLYFGMYEVWS 177

Query: 243 NGWKGGLRIHHAFVERC 257
           N WKGGLRI+HA VE C
Sbjct: 246 NRWKGGLRIYHALVEEC 177

[Close]

BLAST of Lsi02G010370 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 )

HSP 1 Score: 122.1 bits (305), Expect = 6.6e-28
Identity = 65/132 (49.24%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 128 AELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKGNFSFK 187
           AELK V WLEVTGS +K + PGK Y++GFKIS +PDA GWD   V++ AKIGKKG   +K
Sbjct: 52  AELKMVSWLEVTGSFDK-IEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWK 111

Query: 188 KISLAGLPTNLLR-----ITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNGW 247
           +I        +L+     + IP+  D L   +     S  + N D KL FGLYEVWT  W
Sbjct: 112 RIKSVSQNFGILKGGSEPVNIPDESDGLFEIL----VSPTALNQDTKLQFGLYEVWTGRW 171

Query: 248 KGGLRIHHAFVE 255
           K GL IH AFV+
Sbjct: 172 KTGLLIHEAFVQ 178

[Close]

BLAST of Lsi02G010370 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 )

HSP 1 Score: 115.9 bits (289), Expect = 4.7e-26
Identity = 65/140 (46.43%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 128 AELKQVCWLEVTGSTEKDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKIGKKGNFSFK 187
           AELK+V WLEVTGS +K + PGK Y++GFKIS   DA GWD   V++ AKIGKKG   +K
Sbjct: 55  AELKKVSWLEVTGSYDK-IEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWK 114

Query: 188 KISLAGLPTNLLRITIPNNDDKL-----IIKVPGDRES--------KPSENDDLKLYFGL 247
           +I            ++ NN DKL      + +P + +         K + N D KL FGL
Sbjct: 115 RIK-----------SVNNNFDKLKGGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGL 174

Query: 248 YEVWTNGWKGGLRIHHAFVE 255
           YEVWT  WK GL I+ AFVE
Sbjct: 175 YEVWTGKWKTGLLIYEAFVE 182

[Close]

BLAST of Lsi02G010370 vs. TAIR 10
Match: AT5G45070.1 (phloem protein 2-A8 )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 32/107 (29.91%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 144 KDLVPGKEYKVGFKISLRPDAFGWDNCSVYIMAKI---GKKGNFSFKKISL-AGLPTNLL 203
           + L+PGK+Y+V F +SL   + GW N  V +  K+    +  N   KK+ L   +  N +
Sbjct: 251 RKLIPGKKYEVVFIVSLDDTSLGWKN-EVTLTLKVVMSDEAANVKAKKLCLDEYIGENWV 310

Query: 204 RITIPNNDDKLIIKVPGDRESKPSENDDLKLYFGLYEVWTNGWKGGL 247
            I +            GD E+ P E +D K++F +Y++     K GL
Sbjct: 311 DIPV------------GDFEA-PQEKEDAKIFFSMYQLLNTERKSGL 343

The following BLAST results are available for this feature:

BLAST of Lsi02G010370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA16	9.2e-27	49.24	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 S...	[more]

BLAST of Lsi02G010370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8T6	3.0e-52	45.53	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498275 PE...	[more]
A0A0A0M0X5	5.2e-49	44.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G709160 PE=4 SV=1	[more]
A0A6J1CNK5	1.6e-42	43.03	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1K456	7.6e-40	40.08	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC11149048...	[more]
A0A6J1CLV7	5.4e-38	62.88	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Momordica charantia OX=3673 ...	[more]

BLAST of Lsi02G010370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896030.1	1.6e-63	53.94	protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]	[more]
XP_008459053.1	6.1e-52	45.53	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
XP_004151321.1	1.1e-48	44.02	protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66904.1 hypothetical prot...	[more]
XP_022142573.1	3.4e-42	43.03	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Momordica charantia]	[more]
XP_022994899.1	1.6e-39	40.08	protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]	[more]

BLAST of Lsi02G010370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31200.1	6.6e-28	49.24	phloem protein 2-A9	[more]
AT1G10155.1	4.7e-26	46.43	phloem protein 2-A10	[more]
AT5G45070.1	1.0e-04	29.91	phloem protein 2-A8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 121..250 e-value: 4.2E-17 score: 62.6
None	No IPR available	PANTHER	PTHR32278:SF2	PROTEIN PHLOEM PROTEIN 2-LIKE A9	coord: 13..45
None	No IPR available	PANTHER	PTHR32278:SF2	PROTEIN PHLOEM PROTEIN 2-LIKE A9	coord: 122..253
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 122..253 coord: 13..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010370.1	Lsi02G010370.1	mRNA