Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGAGGAAATCATTGGGGTGATGAAGGACAAACTTGCATGGCCAGATTTTAAGCTGGTGGTCATTTTTTGGTGGTCCGTGTGGAATCTTCGAAACAACCTGAGTTGGGGTGGTCAGTCAGATGGTCGAGATCTCTGGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGGTGTTGCCTAGCAGGGGTCCGCCTACGAACCCAAACGAGTGACCAAGAGAAACGCTGTGTATGGAGGCCGCCCCCTGTTAGTGAGCTGAAGCTTAATATCGATGCTTCTGTCAGACCTGATACAGGGGAAGTTGGGGGTGGGTGTGTGCTGCGTGGGGCTGGTGGGGAGGTCTTTATGGCGGCCTGTTTGAGCTTACAGAGGTGTTGGAGTGTGGATTTGGCTGAGGGCTGGGCTGTGTATAAAGGGGTCCAACTCGCTCGACAGCTGGGGTTTGCAGAATTTGTGGTGGAGACTGACTCTCTGAGGTTGGTCAAAATCCTGCATGGTGAGCTGCATTATGTGTCGGAAGTGGGGCTGCTGATGGATGACATCCGAGGAATCCTCCATCCTTGGGACAACGGTAAGGTTTTGTTTACACCACGACAGGGAAACAAGGCGGCGCATGTCCTGGCTAGCTTGGCCTTTTCATATGTCGATCGTGTTTGGCTGGAAGAGTGGCCGAGCGAAATCTCTGATGTCCTGAGGAGTGATGCTGTTTCATCTCTGTGA
mRNA sequence
ATGTTCGAGGAAATCATTGGGGTGATGAAGGACAAACTTGCATGGCCAGATTTTAAGCTGGTGGTCATTTTTTGGTGGTCCGTGTGGAATCTTCGAAACAACCTGAGTTGGGGTGGTCAGTCAGATGGTCGAGATCTCTGGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGGTGTTGCCTAGCAGGGGTCCGCCTACGAACCCAAACGAGTGACCAAGAGAAACGCTGTGTATGGAGGCCGCCCCCTGTTAGTGAGCTGAAGCTTAATATCGATGCTTCTGTCAGACCTGATACAGGGGAAGTTGGGGGTGGGTGTGTGCTGCGTGGGGCTGGTGGGGAGGTCTTTATGGCGGCCTGTTTGAGCTTACAGAGGTGTTGGAGTGTGGATTTGGCTGAGGGCTGGGCTGTGTATAAAGGGGTCCAACTCGCTCGACAGCTGGGGTTTGCAGAATTTGTGGTGGAGACTGACTCTCTGAGGTTGGTCAAAATCCTGCATGGTGAGCTGCATTATGTGTCGGAAGTGGGGCTGCTGATGGATGACATCCGAGGAATCCTCCATCCTTGGGACAACGGTAAGGTTTTGTTTACACCACGACAGGGAAACAAGGCGGCGCATGTCCTGGCTAGCTTGGCCTTTTCATATGTCGATCGTGTTTGGCTGGAAGAGTGGCCGAGCGAAATCTCTGATGTCCTGAGGAGTGATGCTGTTTCATCTCTGTGA
Coding sequence (CDS)
ATGTTCGAGGAAATCATTGGGGTGATGAAGGACAAACTTGCATGGCCAGATTTTAAGCTGGTGGTCATTTTTTGGTGGTCCGTGTGGAATCTTCGAAACAACCTGAGTTGGGGTGGTCAGTCAGATGGTCGAGATCTCTGGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGGTGTTGCCTAGCAGGGGTCCGCCTACGAACCCAAACGAGTGACCAAGAGAAACGCTGTGTATGGAGGCCGCCCCCTGTTAGTGAGCTGAAGCTTAATATCGATGCTTCTGTCAGACCTGATACAGGGGAAGTTGGGGGTGGGTGTGTGCTGCGTGGGGCTGGTGGGGAGGTCTTTATGGCGGCCTGTTTGAGCTTACAGAGGTGTTGGAGTGTGGATTTGGCTGAGGGCTGGGCTGTGTATAAAGGGGTCCAACTCGCTCGACAGCTGGGGTTTGCAGAATTTGTGGTGGAGACTGACTCTCTGAGGTTGGTCAAAATCCTGCATGGTGAGCTGCATTATGTGTCGGAAGTGGGGCTGCTGATGGATGACATCCGAGGAATCCTCCATCCTTGGGACAACGGTAAGGTTTTGTTTACACCACGACAGGGAAACAAGGCGGCGCATGTCCTGGCTAGCTTGGCCTTTTCATATGTCGATCGTGTTTGGCTGGAAGAGTGGCCGAGCGAAATCTCTGATGTCCTGAGGAGTGATGCTGTTTCATCTCTGTGA
Protein sequence
MFEEIIGVMKDKLAWPDFKLVVIFWWSVWNLRNNLSWGGQSDGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQEKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKVLFTPRQGNKAAHVLASLAFSYVDRVWLEEWPSEISDVLRSDAVSSL
Homology
BLAST of Lcy13g015840 vs. ExPASy TrEMBL
Match:
A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30
Identity = 85/241 (35.27%), Postives = 126/241 (52.28%), Query Frame = 0
Query: 8 VMKDKLAWPDFKLVVIFWWSVWNLRN----NLSWGGQSDGRDLWAYSSDYLSAFHVGGGC 67
V D ++W +V+ W++WN RN + S GG DL ++S +YL +
Sbjct: 31 VWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLS--DLVSWSENYLQVYQAAQRS 90
Query: 68 CLAGVRLRTQTSDQEKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAA 127
+ + + +WRPP LK+N+DA+ R ++ G G ++R + G V++ A
Sbjct: 91 SXSAL----VVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTA 150
Query: 128 CLSLQRCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLM 187
L R VD EG+AVY+G+ LA + GF F +ETDSLR+ +L + SEVG+L
Sbjct: 151 IRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLC 210
Query: 188 DDIRGILHPW-DNGKVLFTPRQGNKAAHVLASLAFSYVD-RVWLEEWPSEISDVLRSDAV 243
I+ L + FT R GN AH+LA LA + ++W+EEWP EIS VL D
Sbjct: 211 SVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVDCR 265
BLAST of Lcy13g015840 vs. ExPASy TrEMBL
Match:
A0A5C7ITL2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 PE=3 SV=1)
HSP 1 Score: 114.4 bits (285), Expect = 6.7e-22
Identity = 68/218 (31.19%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 25 WWSVWNLRNN-LSWGGQSDGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQEKRCVW 84
WW VW+ RN L D+W +++ ++ F V + + S K W
Sbjct: 2 WWRVWHRRNRFLHHKEVFPVSDIWDWANVFIDDFRVAN---FVETKKQLVVSPPPK---W 61
Query: 85 RPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEGWAVYK 144
PP V K+N DA+ R G G GCV+R + G V + C C+ +AE A+
Sbjct: 62 SPPHVGCFKINSDAATRDRDGRSGVGCVIRDSDGYVRASLCQGFDVCYPPQVAETLAILH 121
Query: 145 GVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKVLFTPR 204
G +LA +LG V+E+D+L +V+ + + +SEVG+++ DI I + + F PR
Sbjct: 122 GCRLAAELGLLPTVLESDALSVVEAVRLKSMPLSEVGVVIQDILEIFTSFPVFSICFVPR 181
Query: 205 QGNKAAHVLASLAFSYVDR-VWLEEWPSEISDVLRSDA 241
NK H LA LA +V R VW+ + P + ++ D+
Sbjct: 182 LANKVVHGLARLAVGHVGRFVWVNDCPLAVESLVLGDS 213
BLAST of Lcy13g015840 vs. ExPASy TrEMBL
Match:
A0A2P6SAP1 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0328181 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 3.7e-20
Identity = 72/222 (32.43%), Postives = 104/222 (46.85%), Query Frame = 0
Query: 20 LVVIFWWSVWNLRNNLSWGGQ-SDGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQE 79
L ++ W +W+ RNNL W G + + ++S +L + V Q
Sbjct: 997 LFFVYLWVIWSERNNLVWNGSVFNAYNAAQWASKFLGEYQ--------QVHPTRQKKSGR 1056
Query: 80 KRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEG 139
R W PP LK+NID S RP++G+ G G V+R G A S E
Sbjct: 1057 TRAKWENPPTGRLKINIDGSYRPESGDGGIGVVIRDDKGSCMAAMARYFPNVLSAFHMEA 1116
Query: 140 WAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKV 199
A G+ LA + EF++E+D +V L+ L SEVG ++DD + L + K+
Sbjct: 1117 EACRAGLLLAIYQEWDEFILESDCSLMVAALNQNLEDRSEVGRIIDDCKSYLTSLHSIKI 1176
Query: 200 LFTPRQGNKAAHVLASLAFS-YVDRVWLEEWPSEISDVLRSD 240
R+ N A+ LA LA S +++ VWLEE P I DVL D
Sbjct: 1177 SHVFREANGVANRLAHLARSKFLNDVWLEEAPVIIQDVLYED 1210
BLAST of Lcy13g015840 vs. ExPASy TrEMBL
Match:
A0A6P5S7Q3 (uncharacterized protein LOC110753261 OS=Prunus avium OX=42229 GN=LOC110753261 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 75/230 (32.61%), Postives = 114/230 (49.57%), Query Frame = 0
Query: 19 KLVVIFWWSVWNLRNNLSWGGQSDGRDLWAYSSDYLSAFH---VGGGCCLAGVRLRTQTS 78
+L + W++W RN + G+S +++ + +L+ + V G L
Sbjct: 2 RLFLYICWNLWQNRNKVVIEGRSSAQNVIFNRAIFLADEYESLVKGEPKLI--------- 61
Query: 79 DQEKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDL 138
EK W PPPV KLN+DA+ P+TG G G V+R GEV A L L S
Sbjct: 62 -VEKPSKWSPPPVGRYKLNVDAAFIPETGVSGIGAVVRNDKGEVMAAMALPLANATSSKH 121
Query: 139 AEGWAVYKGVQLARQLGFAEFVVETDSLRLVK-ILHGELHYVSEVGLLMDDIRGILHPWD 198
AE A+ G+ AR GF+ F++E+DS +V + E + G L+DDI+ L ++
Sbjct: 122 AEIMALQFGMNFARDAGFSSFLMESDSQGVVNDVKKDEEESWASDGHLIDDIKRSLQHFE 181
Query: 199 NGKVLFTPRQGNKAAHVLASLAFSYVDRV-WLEEWPSEISDVLRSDAVSS 244
+ F+PR+ N+ AH LA A + + V W+EE P + V+ D V S
Sbjct: 182 EVTISFSPRRCNQVAHFLARHALNCDNMVTWIEEVPFWLDSVVNDDIVVS 221
BLAST of Lcy13g015840 vs. ExPASy TrEMBL
Match:
A0A803QMZ3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 68/235 (28.94%), Postives = 110/235 (46.81%), Query Frame = 0
Query: 17 DFKLVVIFWWSVWNLRNNLSWGGQS-DGRDLWAYSSDYLSAFHVGG----------GCCL 76
DF+L+V W++W+ RN + GG S RD+ +++ +L FH
Sbjct: 599 DFELIVCTMWAIWHERNKVIHGGVSKPSRDITVFANQHLDKFHRSSRKNQQQYTVCNTST 658
Query: 77 AGVRLRTQTSDQEKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACL 136
+ V ++ W PP +S LKLN+DA++ + +G G ++R G V A
Sbjct: 659 SPVDVQATIQQHSTTVSWTPPTLSGLKLNVDAALNQEQKILGVGAIIRNENGNVIAALSK 718
Query: 137 SLQRCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDD 196
+Q C+ D E A++ + ARQL VETD+LR+ ++ +S L+ D
Sbjct: 719 PVQGCFRSDELEAKALFHSLNWARQLQLRITHVETDALRVSSAINSPFKNLSSFDDLIMD 778
Query: 197 IRGILHPWDNGKVLFTPRQGNKAAHVLASLAFSYVDRV-WLEEWPSEISDVLRSD 240
+ +L + V R N+AAH LA A + V W+ E P+ I V+ +D
Sbjct: 779 VCYLLFFFSGVTVSHVKRNANQAAHGLARYALELDEDVCWMGEIPNPIFSVVVND 833
BLAST of Lcy13g015840 vs. NCBI nr
Match:
XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])
HSP 1 Score: 143.7 bits (361), Expect = 2.1e-30
Identity = 85/241 (35.27%), Postives = 126/241 (52.28%), Query Frame = 0
Query: 8 VMKDKLAWPDFKLVVIFWWSVWNLRN----NLSWGGQSDGRDLWAYSSDYLSAFHVGGGC 67
V D ++W +V+ W++WN RN + S GG DL ++S +YL +
Sbjct: 31 VWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLS--DLVSWSENYLQVYQAAQRS 90
Query: 68 CLAGVRLRTQTSDQEKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAA 127
+ + + +WRPP LK+N+DA+ R ++ G G ++R + G V++ A
Sbjct: 91 SXSAL----VVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTA 150
Query: 128 CLSLQRCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLM 187
L R VD EG+AVY+G+ LA + GF F +ETDSLR+ +L + SEVG+L
Sbjct: 151 IRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLC 210
Query: 188 DDIRGILHPW-DNGKVLFTPRQGNKAAHVLASLAFSYVD-RVWLEEWPSEISDVLRSDAV 243
I+ L + FT R GN AH+LA LA + ++W+EEWP EIS VL D
Sbjct: 211 SVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVDCR 265
BLAST of Lcy13g015840 vs. NCBI nr
Match:
XP_023884925.1 (uncharacterized protein LOC111997106 [Quercus suber])
HSP 1 Score: 120.6 bits (301), Expect = 1.9e-23
Identity = 73/223 (32.74%), Postives = 110/223 (49.33%), Query Frame = 0
Query: 23 IFW---WSVWNLRNNLSWGGQ-SDGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQE 82
+FW W VWN RN L GGQ L + +Y+S F A RL Q + Q
Sbjct: 15 LFWTQAWIVWNQRNCLLHGGQLKVPSSLNKRAEEYISEFKE------AQSRLGVQRAQQP 74
Query: 83 KRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEG 142
W+PPP E K+N DA++ + G+ G G ++R GEV A S + D AE
Sbjct: 75 AGDTWQPPPPGEFKMNFDAAMFSELGKTGYGAIIRNENGEVMAAMSASGPMVRTSDEAEF 134
Query: 143 WAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKV 202
A + ++ A GF+ +VE D++ +V+ + + +S +G+++DDIR +L +
Sbjct: 135 LACRRAIEFAVDAGFSRMIVEGDNINVVQAISSSVENISPIGIVVDDIRHLLRSLQWVSI 194
Query: 203 LFTPRQGNKAAHVLASLAFSYVDR--VWLEEWPSEISDVLRSD 240
R GN AHVLA A + +D WLE+ P ++ L D
Sbjct: 195 CCIRRGGNHVAHVLAQYARNCLDEDLYWLEDSPPPAAEALYRD 231
BLAST of Lcy13g015840 vs. NCBI nr
Match:
TXG72479.1 (hypothetical protein EZV62_001058 [Acer yangbiense])
HSP 1 Score: 114.4 bits (285), Expect = 1.4e-21
Identity = 68/218 (31.19%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 25 WWSVWNLRNN-LSWGGQSDGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQEKRCVW 84
WW VW+ RN L D+W +++ ++ F V + + S K W
Sbjct: 2 WWRVWHRRNRFLHHKEVFPVSDIWDWANVFIDDFRVAN---FVETKKQLVVSPPPK---W 61
Query: 85 RPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEGWAVYK 144
PP V K+N DA+ R G G GCV+R + G V + C C+ +AE A+
Sbjct: 62 SPPHVGCFKINSDAATRDRDGRSGVGCVIRDSDGYVRASLCQGFDVCYPPQVAETLAILH 121
Query: 145 GVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKVLFTPR 204
G +LA +LG V+E+D+L +V+ + + +SEVG+++ DI I + + F PR
Sbjct: 122 GCRLAAELGLLPTVLESDALSVVEAVRLKSMPLSEVGVVIQDILEIFTSFPVFSICFVPR 181
Query: 205 QGNKAAHVLASLAFSYVDR-VWLEEWPSEISDVLRSDA 241
NK H LA LA +V R VW+ + P + ++ D+
Sbjct: 182 LANKVVHGLARLAVGHVGRFVWVNDCPLAVESLVLGDS 213
BLAST of Lcy13g015840 vs. NCBI nr
Match:
XP_030941688.1 (uncharacterized protein LOC115966628 [Quercus lobata])
HSP 1 Score: 112.1 bits (279), Expect = 6.9e-21
Identity = 71/241 (29.46%), Postives = 115/241 (47.72%), Query Frame = 0
Query: 4 EIIGVMKDKLAWPDFKLVVIFWWSVWNLRNNLSWGGQ-SDGRDLWAYSSDYLSAFHVGGG 63
++ G + ++L+ +F+L + W +WN RN + GG+ D L + YL +
Sbjct: 948 QLFGELLNRLSREEFELFLTLSWVIWNQRNAVIHGGKIKDPGQLCKRAEVYLLEYRQAQD 1007
Query: 64 CCLAGVRLRTQTSDQEKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMA 123
+ R Q+ Q W+PPP+ KLN DA++ + G G G ++R GEV A
Sbjct: 1008 --QLSIPSRQQSVTQ-----WQPPPIDRYKLNFDAAIFTELGCSGFGAIVRNERGEVMAA 1067
Query: 124 ACLSLQRCWSVDLAEGWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLL 183
+ W+ + AE A + V+ A GFAE ++E D++ ++K + S +G +
Sbjct: 1068 LSVKGPLVWNSEEAEALACRRAVEFAIHAGFAELMIEGDNVNVMKAVCSNSMDKSRLGHV 1127
Query: 184 MDDIRGILHPWDNGKVLFTPRQGNKAAHVLASLA-FSYVDRVWLEEWPSEISDVLRSDAV 243
DI+ ++H V R N AH LA A + + +WLEE P SD L D +
Sbjct: 1128 FQDIQCLVHGLRWSSVSCVKRGANGVAHSLARFARYVSEETIWLEECPPLASDALYQDLL 1181
BLAST of Lcy13g015840 vs. NCBI nr
Match:
XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])
HSP 1 Score: 109.8 bits (273), Expect = 3.4e-20
Identity = 73/223 (32.74%), Postives = 104/223 (46.64%), Query Frame = 0
Query: 23 IFW---WSVWNLRNNLSWGGQ-SDGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQE 82
+FW W VW RN+L GG+ L + +Y++ F A RL Q + Q
Sbjct: 1545 LFWTQAWLVWCQRNSLLHGGRLKVPSSLNLRAEEYITEFR------NAQNRLDVQRTQQS 1604
Query: 83 KRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEG 142
+W+PPP E KLN DA+V D G G G ++R GEV A S + D AE
Sbjct: 1605 ISDIWQPPPPGEFKLNFDAAVFSDLGRTGYGAIIRNEKGEVMAAMSASGPMVRNSDEAEF 1664
Query: 143 WAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKV 202
A K ++ GF+ +VE D++ + + L S G ++DDI +L V
Sbjct: 1665 LACRKALEFGVDAGFSRLIVEGDNINVTHAISSSLVNASPFGYVLDDICHLLRSLQRVSV 1724
Query: 203 LFTPRQGNKAAHVLASLAFSYV--DRVWLEEWPSEISDVLRSD 240
T R GN+ AHVLA A + + D W+E+ P + L D
Sbjct: 1725 GCTRRGGNQVAHVLAQYARNSLEEDVYWMEDSPPPAVEALYCD 1761
BLAST of Lcy13g015840 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 72.0 bits (175), Expect = 7.4e-13
Identity = 55/204 (26.96%), Postives = 96/204 (47.06%), Query Frame = 0
Query: 19 KLVVIFWWSVWNLRNNLSWGGQS-DGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQ 78
+LV W +W RN L + G+ + +++ + D L + + G + + S
Sbjct: 358 QLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSC 417
Query: 79 EKRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAE 138
+ WRPPP +K N DA+ D G G VLR GEV +L + SV AE
Sbjct: 418 GR---WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAE 477
Query: 139 GWAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGK 198
A+ V + + + E+DS L++IL+ + + S + + D++ +L + K
Sbjct: 478 LEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPS-LKPTIQDLQRLLSQFTEVK 537
Query: 199 VLFTPRQGNKAAHVLASLAFSYVD 222
+F PR+GN A +A + S+++
Sbjct: 538 FVFIPREGNTLAERVARESLSFLN 557
BLAST of Lcy13g015840 vs. TAIR 10
Match:
AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 68.9 bits (167), Expect = 6.3e-12
Identity = 55/205 (26.83%), Postives = 93/205 (45.37%), Query Frame = 0
Query: 20 LVVIFWWSVWNLRNNLSWGGQS-DGRDLWAYSSDYLSAFHVGGGCCLAGVRLRTQTSDQE 79
LV W +W RN L + G+ D ++ + + + L G Q ++
Sbjct: 76 LVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRE--LEGKASGPQV-ERN 135
Query: 80 KRCVWRPPPVSELKLNIDASVRPDTGEVGGGCVLRGAGGEVFMAACLSLQRCWSVDLAEG 139
W+ PP +K N DA+ + + G G +LR G V +L R +V AE
Sbjct: 136 LSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAEL 195
Query: 140 WAVYKGVQLARQLGFAEFVVETDSLRLVKILHGELHYVSEVGLLMDDIRGILHPWDNGKV 199
A+ V + + + E+D+ LV +L+ + + + ++DI+ +LH ++ K
Sbjct: 196 EALRWAVLTMSRFNYKRIIFESDAQALVNLLNSD-DFWPTLQPALEDIQQLLHHFEEVKF 255
Query: 200 LFTPRQGNKAAHVLA--SLAFSYVD 222
FTPR GNK A +A S++FS D
Sbjct: 256 EFTPRGGNKVADRIARESISFSNYD 276
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DBJ7 | 1.0e-30 | 35.27 | uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A5C7ITL2 | 6.7e-22 | 31.19 | RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 ... | [more] |
A0A2P6SAP1 | 3.7e-20 | 32.43 | Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... | [more] |
A0A6P5S7Q3 | 1.1e-19 | 32.61 | uncharacterized protein LOC110753261 OS=Prunus avium OX=42229 GN=LOC110753261 PE... | [more] |
A0A803QMZ3 | 1.1e-19 | 28.94 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 7.4e-13 | 26.96 | Ribonuclease H-like superfamily protein | [more] |
AT2G34320.1 | 6.3e-12 | 26.83 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |