Lcy13g015420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g015420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Location	Chr13: 39161133 .. 39163405 (-)
RNA-Seq Expression	Lcy13g015420
Synteny	Lcy13g015420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTGGATGTGGAGAAATCAAGTGGAGCTAAGAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATCTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCGTATGCTAAGTGTAAATACTGTGGGGCTAAGTATGCATGTCATTCTAAGCGTAATGGTACCGACAGTTTGAAACATCATTTAGAAAATTGTAAGAAATACCCTTATCAAAGAACGAAAGATCCTGGACAAAAACAATTGGTTTTCAAGCCTAAGGAAGCGATTGATAATTCTGAATCAAAACTTAGTTGTGATACTTTCAGTCTGGAGAGTTGTAGAAGAGCTCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGTTTGTGGAGAACATAGGTTTCCGAAGATTCATCAACAAATCAATAGCTTTGTTTGCGCCTAATTTTGTCCTTCCATCTCGAATAACTATTGCTAGGGATGTGCTTAAGATATATGTTAGTGAGAAAAAAACGTTTGAAAGACATGTTTAAGGCAAAACGTTATAGAGTTTCTCTCACTACTGACTGTTGGACTTCTGGACAAAACATTAATTACATGGTATTGACGGCACACTTTATTGATTTTGATTGGAATTTGCATAAGAGGATTCTTAGTTTTTCTACAATTGAGAATCATAGAGGGGATACCATTGGTAAAACCATTGAAAAGAATTTAAAGAATTGGGGTATTGATAAAGTTATGACCTTGACTGTGGACAATGCCAGTTCAAATGATACTGCAGTTGCTTATCTTATTAAGAGATTTAGTAGTGGGTTGTTACTGAATGGTGAATTTTTACACGTTAGATGTTGTGCCCACATATTAAATCTTATTGTATGTGATGCTTTCAAGGAGCATTATGAGTGCATTACTAGGAGCATTATGAGTGCATTACTAGGATTCGCAATGTTGTGAGATTCGTGAGGTCTTCTCCCGCACGTGCTTCAAAATTTAAGAAGTGTATTGAAATTGAAAAGATTAACTCAAAGAGTTTGGTGTGTCTAGATGTTTCCACTAGATGGAACTCTACATATATGATGCTTGAGGCGGCTACAAAATTCCAAAAAGCTTTTGAGAGGCTAGAGGATGAAGATTCAACTTTTATGAGTGAAATTCAACCAACTAAAGAAGATTGGGATAATGCTAAGATGTTGGTTAGGTTTTTTAAAGTGTTTTATAATGTCACTTTAAAGATTTCAGGCTCTTTATATACCACATCTAATGTGATTTTCCACCAAATTAGCACAATTCAAAATTGCATACAACTAAATTCTATGGATAGTGCAAATCAAATTCTTTGTGATGTGGCTAAGAGCATGAAGTCTAAGTTTGAGAAATATTGGGAAAATAATGAGAAGACCAATTTGTTGTTGTATGTTGCTGTTGTGTTGGACCCACGATATAAGTTGAAATTTTTGTCTTATTGTTTCAACAACTTGTTAGAGCCAACTTCTGCTAAAAGCATGACAGATAAGGTAGAACAGATTTTGAGACAACTCTTCCATGCATATAGTTCATATTCTTTTGGTAGTGGTGGTAGTGGCATTGGCATTGGCAGTGGTGGTAATGGCATTGGCAGTGGTGGTAGTGGCAGTGGCATTGGCAGTGGTTGTAGTGGTAGTGTCATTACTAAAGAAAAAGGTTGGGTTGGAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCACGTTCATTCTCAAGTGTCGAAACTACTACATTCGATAGAGAGTCAGAGATTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAATTGGTGGAAGCATAATAGTCATCGGTTCGAGATTCTTGGTGCAATAAGTAGAGATCTTTTGGCAATTCCAGTTTCGACCGTAGCATCTGAGTCTGCTTTTAGCACTGGAAGACGTGTAGTTGATTCCTCTCGTTCTTCATTAGCTCCAAAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTACTGAAGGAAGACTCAACACTGGAAGAAGGTAATGTTTTTACTTTTTTTTTTTTTTTTTTTTTTGCTTGATTAAACTTTTATTTTCAATTTTAAAAGTGTTAATCTATTGTGTATAATTTTGTAGGATTCAGAATGGTCATCGATGAAGAAAAAGATGTTGATGAGATTGACTTTTCAAAGTTGTGA

mRNA sequence

ATGTTGTGGATGTGGAGAAATCAAGTGGAGCTAAGAAAAGTAAATGGTGGTAGTGGCATTGGCATTGGCAGTGGTGGTAATGGCATTGGCAGTGGTGGTAGTGGCAGTGGCATTGGCAGTGGTTGTAGTGGTAGTGTCATTACTAAAGAAAAAGGTTGGGTTGGAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCACGTTCATTCTCAAGTGTCGAAACTACTACATTCGATAGAGAGTCAGAGATTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAATTGGTGGAAGCATAATAGTCATCGGTTCGAGATTCTTGGTGCAATAAGTAGAGATCTTTTGGCAATTCCAGTTTCGACCGTAGCATCTGAGTCTGCTTTTAGCACTGGAAGACGTGTAGTTGATTCCTCTCGTTCTTCATTAGCTCCAAAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTACTGAAGGAAGACTCAACACTGGAAGAAGGATTCAGAATGGTCATCGATGAAGAAAAAGATGTTGATGAGATTGACTTTTCAAAGTTGTGA

Coding sequence (CDS)

ATGTTGTGGATGTGGAGAAATCAAGTGGAGCTAAGAAAAGTAAATGGTGGTAGTGGCATTGGCATTGGCAGTGGTGGTAATGGCATTGGCAGTGGTGGTAGTGGCAGTGGCATTGGCAGTGGTTGTAGTGGTAGTGTCATTACTAAAGAAAAAGGTTGGGTTGGAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCACGTTCATTCTCAAGTGTCGAAACTACTACATTCGATAGAGAGTCAGAGATTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAATTGGTGGAAGCATAATAGTCATCGGTTCGAGATTCTTGGTGCAATAAGTAGAGATCTTTTGGCAATTCCAGTTTCGACCGTAGCATCTGAGTCTGCTTTTAGCACTGGAAGACGTGTAGTTGATTCCTCTCGTTCTTCATTAGCTCCAAAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTACTGAAGGAAGACTCAACACTGGAAGAAGGATTCAGAATGGTCATCGATGAAGAAAAAGATGTTGATGAGATTGACTTTTCAAAGTTGTGA

Protein sequence

MLWMWRNQVELRKVNGGSGIGIGSGGNGIGSGGSGSGIGSGCSGSVITKEKGWVGTMDVDDESETYGFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLKEDSTLEEGFRMVIDEEKDVDEIDFSKL

Homology

[Close]

BLAST of Lcy13g015420 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 5.7e-19
Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 60  DDESETY-GFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILG 119
           DDE + Y    + +  VE+      +E+D Y+ E L K    FDIL+WW+     + IL 
Sbjct: 649 DDEFQNYLHELKDYDQVES------NELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILT 708

Query: 120 AISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFK 179
            I+RD+LAI VSTVASESAFS G RVVD  R+ L  + VEALICT++W+ ++     +F 
Sbjct: 709 QIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWVAASRKGATYFP 768

Query: 180 LLKED-STLEEGFRMVIDEEKDVDE----IDFSK 208
            +  D   L+       + E  +DE    I+FSK
Sbjct: 769 TMIGDLEVLDSVIAAATNHENHMDEDEDAIEFSK 796

[Close]

BLAST of Lcy13g015420 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.7e-18
Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 60  DDESETY-GFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILG 119
           DDE + Y    + +  VE+      +E+D Y+ E L K    FDIL+WW+     + IL 
Sbjct: 618 DDEFQNYLHELKDYDQVES------NELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILT 677

Query: 120 AISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWL 168
            I+RD+LAI VSTVASESAFS G RVVD  R+ L  + VEALICT++W+
Sbjct: 678 QIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 720

[Close]

BLAST of Lcy13g015420 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.5e-16
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 75  VETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVAS 134
           +ETT  + +SE+D YL ETL      FD+L+WWK N  ++  L  ++RD+L+IPVS  A 
Sbjct: 582 METTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAF 641

Query: 135 ESAFSTGRRVVDSSRSSLAPKTVEALICTQNWL 168
           +  F    R +D  ++SL P+TVEALIC + WL
Sbjct: 642 DYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

[Close]

BLAST of Lcy13g015420 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.0e-15
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 78  TTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVAS-ES 137
           T+   +SE++ YL E+L      FDILNWWK N+ ++  L  ++RD+LAIP+S V+S  S
Sbjct: 610 TSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNS 669

Query: 138 AFS--TGRRVVDSSRSSLAPKTVEALICTQNWLNSNP 172
            FS  TG R++D  RSS  P+ VEAL+C ++WL   P
Sbjct: 670 IFSAGTGTRMLDDYRSSSRPEIVEALVCAKDWLQYLP 706

[Close]

BLAST of Lcy13g015420 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.0e-15
Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 84  SEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASE----SAFS 143
           SE++ YL E L      F+IL WWK N+ +F  L  ++RD+LAIP+S V+S     SA +
Sbjct: 646 SELEQYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATA 705

Query: 144 TGRRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIE 176
           TG +++D  RSSL P+TVEAL C ++WL   P   E
Sbjct: 706 TGSQMLDDYRSSLRPETVEALFCAKDWLQYPPATTE 741

[Close]

BLAST of Lcy13g015420 vs. ExPASy TrEMBL
Match: A0A5D3DXX1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00760 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 102/185 (55.14%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 36  SGIGSGCSGSVITKEKGWVGTMDVD---DESETYG-------FARSFSSVETTTFD-RES 95
           SG   GCS S  T     V ++D +   D +E  G           F    TT F+ R S
Sbjct: 21  SGSRQGCS-STSTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQRSS 80

Query: 96  EIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRV 155
           EID+YLLE   + +  FDIL WWK NS RFE+LG ++RD+LAIPVSTVASESAFSTG RV
Sbjct: 81  EIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVASESAFSTGGRV 140

Query: 156 VDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLKEDSTLEEGFRMVIDEEKDVDEI- 209
           +DSSR SLAPKTVEALICTQNWLNSNPI ++F   L+E S  EEGFR+V++ EK+++++ 
Sbjct: 141 IDSSRCSLAPKTVEALICTQNWLNSNPIHLQFQHELEEASKFEEGFRVVMENEKELEDLP 200

[Close]

BLAST of Lcy13g015420 vs. ExPASy TrEMBL
Match: A0A5D3E6G3 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004850 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 90/153 (58.82%), Postives = 116/153 (75.82%), Query Frame = 0


Query: 58  DVDDESET-----YGFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSH 117
           DV D+ ET     YG   SF  VETTT D+ESEIDVYLL++L   DS+FDIL WWK N +
Sbjct: 557 DVKDDVETDVDLDYGITNSFKDVETTTLDKESEIDVYLLDSLVPADSNFDILCWWKQNEY 616

Query: 118 RFEILGAISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNSNPI 177
           RFE+L  ISRD+LAIPVST++SES F+ G  VV+S+R S+APK +EALICT+NWLNS+PI
Sbjct: 617 RFEVLSRISRDILAIPVSTISSESTFNIGGCVVNSNRCSVAPKMMEALICTRNWLNSSPI 676

Query: 178 DIEFFKL-LKEDSTLEEGFRMVIDEEKDVDEID 205
           ++E     L+ED   EEGFR V+D EKD+++++
Sbjct: 677 NLEIHNQDLEEDLRFEEGFRAVMDGEKDMEDME 709

[Close]

BLAST of Lcy13g015420 vs. ExPASy TrEMBL
Match: A0A5D3CXI1 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004160 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.0e-39
Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 36  SGIGSGCSGSVITKEKGWVG-TMDVD-DESETYG-------FARSFSSVETTTFDR-ESE 95
           SG   GCS +  T  +   G   ++D D +E  G           F    TT F++  SE
Sbjct: 430 SGSRQGCSSTSTTSTQTVSGLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQGSSE 489

Query: 96  IDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRVV 155
           ID+YLLE   + +  FDIL WWK NS RFE+LG ++RD+LAIPVSTVASESAFSTG RVV
Sbjct: 490 IDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVASESAFSTGGRVV 549

Query: 156 DSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLKEDSTLEEGFRMVIDEEKDVDEI-D 209
           DSSR SLAPKTVEALICTQNWLNS+PI ++F   L+E S  EEGFR+V++ EK+++++ D
Sbjct: 550 DSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEEGFRVVMENEKELEDLPD 609

[Close]

BLAST of Lcy13g015420 vs. ExPASy TrEMBL
Match: A0A5D3DAN8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001750 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.0e-39
Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 36  SGIGSGCSGSVITKEKGWVG-TMDVD-DESETYG-------FARSFSSVETTTFDR-ESE 95
           SG   GCS +  T  +   G   ++D D +E  G           F    TT F++  SE
Sbjct: 481 SGSRQGCSSTSTTSTQTVSGLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQGSSE 540

Query: 96  IDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRVV 155
           ID+YLLE   + +  FDIL WWK NS RFE+LG ++RD+LAIPVSTVASESAFSTG RVV
Sbjct: 541 IDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVASESAFSTGGRVV 600

Query: 156 DSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLKEDSTLEEGFRMVIDEEKDVDEI-D 209
           DSSR SLAPKTVEALICTQNWLNS+PI ++F   L+E S  EEGFR+V++ EK+++++ D
Sbjct: 601 DSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEEGFRVVMENEKELEDLPD 660

[Close]

BLAST of Lcy13g015420 vs. ExPASy TrEMBL
Match: A0A5D3DIL8 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00350 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.0e-39
Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 36  SGIGSGCSGSVITKEKGWVG-TMDVD-DESETYG-------FARSFSSVETTTFDR-ESE 95
           SG   GCS +  T  +   G   ++D D +E  G           F    TT F++  SE
Sbjct: 363 SGSRQGCSSTSTTSTQTVSGLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQGSSE 422

Query: 96  IDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRVV 155
           ID+YLLE   + +  FDIL WWK NS RFE+LG ++RD+LAIPVSTVASESAFSTG RVV
Sbjct: 423 IDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVASESAFSTGGRVV 482

Query: 156 DSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLKEDSTLEEGFRMVIDEEKDVDEI-D 209
           DSSR SLAPKTVEALICTQNWLNS+PI ++F   L+E S  EEGFR+V++ EK+++++ D
Sbjct: 483 DSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEEGFRVVMENEKELEDLPD 542

[Close]

BLAST of Lcy13g015420 vs. NCBI nr
Match: XP_038888299.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 5.5e-43
Identity = 98/156 (62.82%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 57  MDVDDESE-------TYGFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKH 116
           +DVD E+E        YG   SF   ETTTFD+ESEIDVYLLE+L   DS+FDIL WWK 
Sbjct: 602 VDVDVENELEAEVELDYGITNSFKIDETTTFDKESEIDVYLLESLTPADSNFDILRWWKE 661

Query: 117 NSHRFEILGAISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNS 176
           N HRFE+L  ISRD+LAIPVSTVAS+SAFS G RVV+S+R SLAP+ VEALICTQNWLNS
Sbjct: 662 NDHRFEVLSRISRDILAIPVSTVASDSAFSIGGRVVNSNRCSLAPRMVEALICTQNWLNS 721

Query: 177 NPIDIEFFKL-LKEDSTLEEGFRMVIDEEKDVDEID 205
           +PI++E     L+ED   EEGFR V+D EKD+ +++
Sbjct: 722 DPINLELHNQDLEEDLKFEEGFRAVMDGEKDIKDME 757

[Close]

BLAST of Lcy13g015420 vs. NCBI nr
Match: XP_031739490.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus] >KAE8651423.1 hypothetical protein Csa_002462 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-42
Identity = 96/154 (62.34%), Postives = 117/154 (75.97%), Query Frame = 0


Query: 57  MDVDDESET-----YGFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNS 116
           +DV DE ET     YG   SF  VETTT D+ESEIDVYLLE+LA  DS FDIL+WWK N 
Sbjct: 591 VDVKDEVETDVDLDYGITNSFKDVETTTLDKESEIDVYLLESLAPADSYFDILHWWKQNE 650

Query: 117 HRFEILGAISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNSNP 176
           HRFE+L  ISRD+LAIPVSTV+SES F+ G  VV+S+R S+APK +EALICT NWLN+NP
Sbjct: 651 HRFEVLSRISRDILAIPVSTVSSESTFNIGGCVVNSNRCSVAPKMMEALICTHNWLNTNP 710

Query: 177 IDIEFFKL-LKEDSTLEEGFRMVIDEEKDVDEID 205
           I++E     L+ED   EEGFR V+D EKDV++++
Sbjct: 711 INLEIHNQDLEEDLRFEEGFRAVMDGEKDVEDME 744

[Close]

BLAST of Lcy13g015420 vs. NCBI nr
Match: KAA0048472.1 (transposase [Cucumis melo var. makuwa] >TYK28268.1 transposase [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 2.5e-40
Identity = 102/185 (55.14%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 36  SGIGSGCSGSVITKEKGWVGTMDVD---DESETYG-------FARSFSSVETTTFD-RES 95
           SG   GCS S  T     V ++D +   D +E  G           F    TT F+ R S
Sbjct: 21  SGSRQGCS-STSTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQRSS 80

Query: 96  EIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRV 155
           EID+YLLE   + +  FDIL WWK NS RFE+LG ++RD+LAIPVSTVASESAFSTG RV
Sbjct: 81  EIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVASESAFSTGGRV 140

Query: 156 VDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLKEDSTLEEGFRMVIDEEKDVDEI- 209
           +DSSR SLAPKTVEALICTQNWLNSNPI ++F   L+E S  EEGFR+V++ EK+++++ 
Sbjct: 141 IDSSRCSLAPKTVEALICTQNWLNSNPIHLQFQHELEEASKFEEGFRVVMENEKELEDLP 200

[Close]

BLAST of Lcy13g015420 vs. NCBI nr
Match: KAA0038601.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa] >TYK31200.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 9.7e-40
Identity = 90/153 (58.82%), Postives = 116/153 (75.82%), Query Frame = 0


Query: 58  DVDDESET-----YGFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSH 117
           DV D+ ET     YG   SF  VETTT D+ESEIDVYLL++L   DS+FDIL WWK N +
Sbjct: 557 DVKDDVETDVDLDYGITNSFKDVETTTLDKESEIDVYLLDSLVPADSNFDILCWWKQNEY 616

Query: 118 RFEILGAISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNSNPI 177
           RFE+L  ISRD+LAIPVST++SES F+ G  VV+S+R S+APK +EALICT+NWLNS+PI
Sbjct: 617 RFEVLSRISRDILAIPVSTISSESTFNIGGCVVNSNRCSVAPKMMEALICTRNWLNSSPI 676

Query: 178 DIEFFKL-LKEDSTLEEGFRMVIDEEKDVDEID 205
           ++E     L+ED   EEGFR V+D EKD+++++
Sbjct: 677 NLEIHNQDLEEDLRFEEGFRAVMDGEKDMEDME 709

[Close]

BLAST of Lcy13g015420 vs. NCBI nr
Match: XP_038888298.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-39
Identity = 91/146 (62.33%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 57  MDVDDESE-------TYGFARSFSSVETTTFDRESEIDVYLLETLAKDDSSFDILNWWKH 116
           +DVD E+E        YG   SF   ETTTFD+ESEIDVYLLE+L   DS+FDIL WWK 
Sbjct: 602 VDVDVENELEAEVELDYGITNSFKIDETTTFDKESEIDVYLLESLTPADSNFDILRWWKE 661

Query: 117 NSHRFEILGAISRDLLAIPVSTVASESAFSTGRRVVDSSRSSLAPKTVEALICTQNWLNS 176
           N HRFE+L  ISRD+LAIPVSTVAS+SAFS G RVV+S+R SLAP+ VEALICTQNWLNS
Sbjct: 662 NDHRFEVLSRISRDILAIPVSTVASDSAFSIGGRVVNSNRCSLAPRMVEALICTQNWLNS 721

Query: 177 NPIDIEFFKL-LKEDSTLEEGFRMVI 195
           +PI++E     L+ED   EEG   ++
Sbjct: 722 DPINLELHNQDLEEDLKFEEGIHFIL 747

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BLAST of Lcy13g015420 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 86.3 bits (212), Expect = 3.2e-17
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 75  VETTTFDRESEIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVAS 134
           +ETT  + +SE+D YL ETL      FD+L+WWK N  ++  L  ++RD+L+IPVS  A 
Sbjct: 582 METTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAF 641

Query: 135 ESAFSTGRRVVDSSRSSLAPKTVEALICTQNWL 168
           +  F    R +D  ++SL P+TVEALIC + WL
Sbjct: 642 DYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

[Close]

BLAST of Lcy13g015420 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 52.4 bits (124), Expect = 5.2e-07
Identity = 24/85 (28.24%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 85  EIDVYLLETLAKDDSSFDILNWWKHNSHRFEILGAISRDLLAIPVSTVASESAFSTGRRV 144
           E+  YL E++    +  D+L+WWK NS R+  L  ++RD LA+  ++ A E  F      
Sbjct: 569 ELTQYLSESIVPMQT--DVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEE 628

Query: 145 VDSSRSSLAPKTVEALICTQNWLNS 170
           +D  +  +   + +++IC ++W+ +
Sbjct: 629 IDKQKYCMPHDSTQSVICIRSWIEA 651

The following BLAST results are available for this feature:

BLAST of Lcy13g015420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08770	5.7e-19	40.26	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	3.7e-18	47.71	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q9M2N5	4.5e-16	45.16	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
B9FJG3	5.0e-15	46.39	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	5.0e-15	45.83	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]

BLAST of Lcy13g015420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXX1	1.2e-40	55.14	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00760 PE...	[more]
A0A5D3E6G3	4.7e-40	58.82	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3CXI1	4.0e-39	54.35	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3DAN8	4.0e-39	54.35	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3DIL8	4.0e-39	54.35	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605...	[more]

BLAST of Lcy13g015420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888299.1	5.5e-43	62.82	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Beninca...	[more]
XP_031739490.1	2.1e-42	62.34	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus] >...	[more]
KAA0048472.1	2.5e-40	55.14	transposase [Cucumis melo var. makuwa] >TYK28268.1 transposase [Cucumis melo var...	[more]
KAA0038601.1	9.7e-40	58.82	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
XP_038888298.1	2.2e-39	62.33	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Beninca...	[more]

BLAST of Lcy13g015420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	3.2e-17	45.16	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	5.2e-07	28.24	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 85..167 e-value: 4.5E-28 score: 96.9
None	No IPR available	PANTHER	PTHR23272:SF145	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE	coord: 37..172
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 37..172
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 74..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g015420.1	Lcy13g015420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity