Lcy12g018270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g018270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	17.1 kDa class II heat shock protein-like
Location	Chr12: 45752271 .. 45752744 (+)
RNA-Seq Expression	Lcy12g018270
Synteny	Lcy12g018270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTAGCCAAAATGGGATTCGACCCAATATTCCTCAACGCCCTCCACGACCTTCTGGACTTCACCGACGAGCCGGGGCAGAGCACCCACCACGCGCCGTCACGCGCCTACGTGAGGGATGCAAAGGCGATGGCGGCGACTCCAGCCGACGTCGTCGAGTATCCAAACGCCTACCACTTCGCGATCGACATGCCCGGCCTCAAAATGGACCAAATCAAGGTCCAAATTGAAGACAACCAGTTGGTGGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAGGTCAAGGAAGGGAAGTATGTGAGAATGGAGAGGAGGCTGGGCAAATATTTGAAGAAATTTGCGCTGCCGGAAACCGCCGACGCCGACAAGGTGACGGCGGCGTACCAGGACGGAGTGCTGTCGGTCACGCTGGAGAAGAAGCCGCCGCCGGAGCCTAAAAAGGCCAAGACTATTGAGGTTCATGTGGGATGA

mRNA sequence

ATGGAACTAGCCAAAATGGGATTCGACCCAATATTCCTCAACGCCCTCCACGACCTTCTGGACTTCACCGACGAGCCGGGGCAGAGCACCCACCACGCGCCGTCACGCGCCTACGTGAGGGATGCAAAGGCGATGGCGGCGACTCCAGCCGACGTCGTCGAGTATCCAAACGCCTACCACTTCGCGATCGACATGCCCGGCCTCAAAATGGACCAAATCAAGGTCCAAATTGAAGACAACCAGTTGGTGGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAGGTCAAGGAAGGGAAGTATGTGAGAATGGAGAGGAGGCTGGGCAAATATTTGAAGAAATTTGCGCTGCCGGAAACCGCCGACGCCGACAAGGTGACGGCGGCGTACCAGGACGGAGTGCTGTCGGTCACGCTGGAGAAGAAGCCGCCGCCGGAGCCTAAAAAGGCCAAGACTATTGAGGTTCATGTGGGATGA

Coding sequence (CDS)

ATGGAACTAGCCAAAATGGGATTCGACCCAATATTCCTCAACGCCCTCCACGACCTTCTGGACTTCACCGACGAGCCGGGGCAGAGCACCCACCACGCGCCGTCACGCGCCTACGTGAGGGATGCAAAGGCGATGGCGGCGACTCCAGCCGACGTCGTCGAGTATCCAAACGCCTACCACTTCGCGATCGACATGCCCGGCCTCAAAATGGACCAAATCAAGGTCCAAATTGAAGACAACCAGTTGGTGGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAGGTCAAGGAAGGGAAGTATGTGAGAATGGAGAGGAGGCTGGGCAAATATTTGAAGAAATTTGCGCTGCCGGAAACCGCCGACGCCGACAAGGTGACGGCGGCGTACCAGGACGGAGTGCTGTCGGTCACGCTGGAGAAGAAGCCGCCGCCGGAGCCTAAAAAGGCCAAGACTATTGAGGTTCATGTGGGATGA

Protein sequence

MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG

Homology

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BLAST of Lcy12g018270 vs. ExPASy Swiss-Prot
Match: P46516 (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.8e-45
Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 6   MGFDPIFLNALHDLLDFTDE---PGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFA 65
           MGFDP+  N LH +L+ TD+     +S +  PSRAYVRDA+AMAATPADV E PN+Y F 
Sbjct: 7   MGFDPLLRN-LHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFI 66

Query: 66  IDMPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEG-KYVRMERRLGKYLKKFALPETA 125
           +DMPGLK   IKVQ+E DN LV+SG+R RE E  KEG KYVRMERR+GK++KKFALPE A
Sbjct: 67  VDMPGLKSGDIKVQVERDNVLVISGKRNREEE--KEGVKYVRMERRMGKFMKKFALPEDA 126

Query: 126 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           + DK++A  QDGVL+VT+EK PPPEPKK KTI+V V
Sbjct: 127 NTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

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BLAST of Lcy12g018270 vs. ExPASy Swiss-Prot
Match: Q01544 (17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.1e-44
Identity = 94/159 (59.12%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 1   MELAKMGFD-PIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAY 60
           M+L  MGFD P+F    H ++D+  +   S   APSR ++ DAKAMAATPADV EYPN+Y
Sbjct: 1   MDLRLMGFDHPLF----HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSY 60

Query: 61  HFAIDMPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPE 120
            F IDMPGLK   IKVQ++ DN L +SGERKRE+E+ +  KYVRMERR+GK ++KF LPE
Sbjct: 61  VFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPE 120

Query: 121 TADADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
            A+ +K+TA  QDGVL+VT+E  PPPEPKK +TIEV +G
Sbjct: 121 NANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKIG 155

[Close]

BLAST of Lcy12g018270 vs. ExPASy Swiss-Prot
Match: Q01545 (18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-43
Identity = 93/159 (58.49%), Postives = 117/159 (73.58%), Query Frame = 0


Query: 3   LAKMGFDPIFLNALHDLLDFTDE---PGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAY 62
           L+  G +P  L+ + D+LDF D+    G++    P RAYVRDAKAMAATPADV EYPN+Y
Sbjct: 8   LSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSY 67

Query: 63  HFAIDMPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEG-KYVRMERRLGKYLKKFALP 122
            F  DMPG+K  +IKVQ+E DN LVVSGER    +  K+G KY+RMERR+GK+++KF LP
Sbjct: 68  VFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLP 127

Query: 123 ETADADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           E A+ + + A YQDGVL VT+EK PPPEPKK KT+EV V
Sbjct: 128 ENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKV 166

[Close]

BLAST of Lcy12g018270 vs. ExPASy Swiss-Prot
Match: P29830 (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-43
Identity = 92/153 (60.13%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 6   MGFDPIFLNALHDLLDF-TDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAID 65
           +G  PI ++ L D+L+   D   + T + PSR Y+RDAKAMAATPADV+E+PNAY F +D
Sbjct: 3   LGRFPI-ISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVD 62

Query: 66  MPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADAD 125
           MPG+K D+IKVQ+E DN LVVSGER+RE+++ +  KYVRMERR+GK+++KF LPE AD D
Sbjct: 63  MPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLD 122

Query: 126 KVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           K++A   DGVL VT++K PPPEPKK KTI+V V
Sbjct: 123 KISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of Lcy12g018270 vs. ExPASy Swiss-Prot
Match: O81822 (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-42
Identity = 89/153 (58.17%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 5   KMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAID 64
           + G  PIF + L D+L+  +E  + T + PSRAY+RDAKAMAATPADV+E+P+AY FA+D
Sbjct: 4   EFGRFPIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVD 63

Query: 65  MPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADAD 124
           MPG+K D+I+VQIE +N LVVSG+R+R++++ +  K+VRMERR+GK+++KF LP+ AD +
Sbjct: 64  MPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLE 123

Query: 125 KVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           K++AA  DGVL VT+ K PPPEPKK KTI+V V
Sbjct: 124 KISAACNDGVLKVTIPKLPPPEPKKPKTIQVQV 155

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BLAST of Lcy12g018270 vs. ExPASy TrEMBL
Match: A0A6J1J4H9 (17.1 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481248 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 143/157 (91.08%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           MELA+MG DPIFLNALHDLLDFTDEPGQSTHH PSRAYVRDAKAMAATPADVVEYPNAY 
Sbjct: 1   MELARMGLDPIFLNALHDLLDFTDEPGQSTHHGPSRAYVRDAKAMAATPADVVEYPNAYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F+IDMPGLKMDQIKVQIEDNQLVV+GERKRESEK KEGKYV MERRLGKYLKKF LPE A
Sbjct: 61  FSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKAKEGKYVTMERRLGKYLKKFVLPEAA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
           D DKV+AAYQDGVLSVT+EKKPPPEPKKAKTIEV VG
Sbjct: 121 DVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRVG 157

[Close]

BLAST of Lcy12g018270 vs. ExPASy TrEMBL
Match: A0A6J1FRJ4 (17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446599 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.1e-73
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           MELA+MG DPIFLNALHDLLDFTDE GQSTHH PSRA+VRDAKAMAATPADVVEYPNAY 
Sbjct: 1   MELARMGLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F+IDMPGLKMDQIKVQIEDNQLVV+GERKRESEKVKEGKYV MERRLGKYLKKF LPE A
Sbjct: 61  FSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEAA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
           D DKV+AAYQDGVLSVT+EKKPPPEPKKAKTIEV VG
Sbjct: 121 DVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRVG 157

[Close]

BLAST of Lcy12g018270 vs. ExPASy TrEMBL
Match: A0A5A7V858 (17.3 kDa class II heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001910 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 136/156 (87.18%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           M++AKMGFDP+FLNALHDLLDF+DEPGQS+HHAPSRAY+RDAKAMAATPADVVEYPN+Y 
Sbjct: 1   MDVAKMGFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F IDMPGLK DQIKV++ED QLVVSGERKRESEKVKEGK+VRMERRLGKYLKKF LPETA
Sbjct: 61  FTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPETA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           D DK++AAYQDGVLSVT+EKKPPPEPKKAKTIE+HV
Sbjct: 121 DTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHV 156

[Close]

BLAST of Lcy12g018270 vs. ExPASy TrEMBL
Match: A0A1S3BUN1 (17.3 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103493687 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 136/156 (87.18%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           M++AKMGFDP+FLNALHDLLDF+DEPGQS+HHAPSRAY+RDAKAMAATPADVVEYPN+Y 
Sbjct: 1   MDVAKMGFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F IDMPGLK DQIKV++ED QLVVSGERKRESEKVKEGK+VRMERRLGKYLKKF LPETA
Sbjct: 61  FTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPETA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           D DK++AAYQDGVLSVT+EKKPPPEPKKAKTIE+HV
Sbjct: 121 DTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHV 156

[Close]

BLAST of Lcy12g018270 vs. ExPASy TrEMBL
Match: A0A0A0L5D4 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646350 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.1e-69
Identity = 135/157 (85.99%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MELAKM-GFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAY 60
           ME+AKM GFDP+FLNALHDLLDF+DEPGQ +HHAPSRAY+RDAKAMAATPADVVEYPN+Y
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  HFAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPET 120
            F IDMPGL  DQIKV++ED QLVVSGERKRESEKVKEGK+VRMERRLGKYLKKF LPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           ADADKV+AAY+DGVLSVT+EKKPPPEPKKAK+IEV V
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRV 157

[Close]

BLAST of Lcy12g018270 vs. NCBI nr
Match: XP_022982419.1 (17.1 kDa class II heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 143/157 (91.08%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           MELA+MG DPIFLNALHDLLDFTDEPGQSTHH PSRAYVRDAKAMAATPADVVEYPNAY 
Sbjct: 1   MELARMGLDPIFLNALHDLLDFTDEPGQSTHHGPSRAYVRDAKAMAATPADVVEYPNAYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F+IDMPGLKMDQIKVQIEDNQLVV+GERKRESEK KEGKYV MERRLGKYLKKF LPE A
Sbjct: 61  FSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKAKEGKYVTMERRLGKYLKKFVLPEAA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
           D DKV+AAYQDGVLSVT+EKKPPPEPKKAKTIEV VG
Sbjct: 121 DVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRVG 157

[Close]

BLAST of Lcy12g018270 vs. NCBI nr
Match: XP_022941228.1 (17.1 kDa class II heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 8.5e-73
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           MELA+MG DPIFLNALHDLLDFTDE GQSTHH PSRA+VRDAKAMAATPADVVEYPNAY 
Sbjct: 1   MELARMGLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F+IDMPGLKMDQIKVQIEDNQLVV+GERKRESEKVKEGKYV MERRLGKYLKKF LPE A
Sbjct: 61  FSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEAA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
           D DKV+AAYQDGVLSVT+EKKPPPEPKKAKTIEV VG
Sbjct: 121 DVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRVG 157

[Close]

BLAST of Lcy12g018270 vs. NCBI nr
Match: KAG7037701.1 (17.2 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           ME+A+MG DPIFLNALHDLLDFTDE GQSTHH PSRA+VRDAKAMAATPADVVEYPNAY 
Sbjct: 1   MEIARMGLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F+IDMPGLKMDQIKVQIEDNQLVV+GERKRESEKVKEGKYV MERRLGKYLKKF LPE A
Sbjct: 61  FSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEAA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
           D DKV+AAYQDGVLSVT+EKKPPPEPKKAKTIEV VG
Sbjct: 121 DVDKVSAAYQDGVLSVTVEKKPPPEPKKAKTIEVRVG 157

[Close]

BLAST of Lcy12g018270 vs. NCBI nr
Match: XP_023524411.1 (17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72
Identity = 141/157 (89.81%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           MELA+MG DPIFLNALHDLLDFTDE GQSTHH PSRA+VRDAKAMAATPADVVEYPNAY 
Sbjct: 1   MELARMGLDPIFLNALHDLLDFTDEAGQSTHHGPSRAFVRDAKAMAATPADVVEYPNAYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F+IDMPGLKMDQIKVQIEDNQLVV+GERKRESEKVKEGKYV MERRLGKYLKKF LPE A
Sbjct: 61  FSIDMPGLKMDQIKVQIEDNQLVVTGERKRESEKVKEGKYVTMERRLGKYLKKFVLPEAA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHVG 158
           D DKV+AAYQDGVLSVT+EKKPPPEPK AKTIEV VG
Sbjct: 121 DVDKVSAAYQDGVLSVTVEKKPPPEPKNAKTIEVRVG 157

[Close]

BLAST of Lcy12g018270 vs. NCBI nr
Match: XP_008452768.1 (PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo] >KAA0064522.1 17.3 kDa class II heat shock protein-like [Cucumis melo var. makuwa] >TYK20068.1 17.3 kDa class II heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 5.5e-72
Identity = 136/156 (87.18%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MELAKMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYH 60
           M++AKMGFDP+FLNALHDLLDF+DEPGQS+HHAPSRAY+RDAKAMAATPADVVEYPN+Y 
Sbjct: 1   MDVAKMGFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSYQ 60

Query: 61  FAIDMPGLKMDQIKVQIEDNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETA 120
           F IDMPGLK DQIKV++ED QLVVSGERKRESEKVKEGK+VRMERRLGKYLKKF LPETA
Sbjct: 61  FTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPETA 120

Query: 121 DADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           D DK++AAYQDGVLSVT+EKKPPPEPKKAKTIE+HV
Sbjct: 121 DTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHV 156

[Close]

BLAST of Lcy12g018270 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein )

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-44
Identity = 92/153 (60.13%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 6   MGFDPIFLNALHDLLDF-TDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAID 65
           +G  PI ++ L D+L+   D   + T + PSR Y+RDAKAMAATPADV+E+PNAY F +D
Sbjct: 3   LGRFPI-ISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVD 62

Query: 66  MPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADAD 125
           MPG+K D+IKVQ+E DN LVVSGER+RE+++ +  KYVRMERR+GK+++KF LPE AD D
Sbjct: 63  MPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLD 122

Query: 126 KVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           K++A   DGVL VT++K PPPEPKK KTI+V V
Sbjct: 123 KISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of Lcy12g018270 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A )

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-43
Identity = 89/153 (58.17%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 5   KMGFDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAID 64
           + G  PIF + L D+L+  +E  + T + PSRAY+RDAKAMAATPADV+E+P+AY FA+D
Sbjct: 4   EFGRFPIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVD 63

Query: 65  MPGLKMDQIKVQIE-DNQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADAD 124
           MPG+K D+I+VQIE +N LVVSG+R+R++++ +  K+VRMERR+GK+++KF LP+ AD +
Sbjct: 64  MPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLE 123

Query: 125 KVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           K++AA  DGVL VT+ K PPPEPKK KTI+V V
Sbjct: 124 KISAACNDGVLKVTIPKLPPPEPKKPKTIQVQV 155

[Close]

BLAST of Lcy12g018270 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 5.2e-20
Identity = 53/113 (46.90%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 49  PADVVEYPNAYHFAIDMPGLKMDQIKVQIEDNQLVV---SGERKRESEKVKEG-KYVRME 108
           P D++E P  Y F +D+PG+    I+V +E+ + +V   +G+RKR+ ++ +EG KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 109 RRLGKYL-KKFALPETADADKVTAAYQDGVLSVTLEKKPPPEPKKAKTIEVHV 157
           RRL + L KKF LPE AD   VTA YQ+GVL+V + KK PP+P K KT+++ V
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVI-KKLPPQPPKPKTVQIAV 154

[Close]

BLAST of Lcy12g018270 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 0


Query: 8   FDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAIDMPG 67
           FDP F   L D  +    P  +  +A +    RD  A      D  E P A+ F  D+PG
Sbjct: 16  FDP-FSQDLWDPFEGFFTPSSALANAST---ARDVAAFTNARVDWKETPEAHVFKADLPG 75

Query: 68  LKMDQIKVQIED-NQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADADKVT 127
           LK +++KV++ED N L +SGER +E+E+ K  K+ R+ER  GK++++F LPE A  ++V 
Sbjct: 76  LKKEEVKVEVEDKNVLQISGERSKENEE-KNDKWHRVERASGKFMRRFRLPENAKMEEVK 135

Query: 128 AAYQDGVLSVTLEKKPPPEPKKAKTIEV 155
           A  ++GVL+V + K P  +P + K+I++
Sbjct: 136 ATMENGVLTVVVPKAPEKKP-QVKSIDI 157

[Close]

BLAST of Lcy12g018270 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-17
Identity = 55/148 (37.16%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 8   FDPIFLNALHDLLDFTDEPGQSTHHAPSRAYVRDAKAMAATPADVVEYPNAYHFAIDMPG 67
           FDP  L+       F    G +  +AP+     D  A      D  E P A+ F  D+PG
Sbjct: 16  FDPFSLDVFDPFEGFLTPSGLA--NAPA----MDVAAFTNAKVDWRETPEAHVFKADLPG 75

Query: 68  LKMDQIKVQIED-NQLVVSGERKRESEKVKEGKYVRMERRLGKYLKKFALPETADADKVT 127
           L+ +++KV++ED N L +SGER  E+E+ K  K+ R+ER  GK+ ++F LPE A  +++ 
Sbjct: 76  LRKEEVKVEVEDGNILQISGERSNENEE-KNDKWHRVERSSGKFTRRFRLPENAKMEEIK 135

Query: 128 AAYQDGVLSVTLEKKPPPEPKKAKTIEV 155
           A+ ++GVLSVT+ K P  +P + K+I++
Sbjct: 136 ASMENGVLSVTVPKVPEKKP-EVKSIDI 155

The following BLAST results are available for this feature:

BLAST of Lcy12g018270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46516	7.8e-45	64.74	17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=...	[more]
Q01544	5.1e-44	59.12	17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1	[more]
Q01545	1.1e-43	58.49	18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1	[more]
P29830	4.3e-43	60.13	17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 ...	[more]
O81822	2.1e-42	58.17	17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 ...	[more]

BLAST of Lcy12g018270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4H9	4.9e-74	91.08	17.1 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FRJ4	4.1e-73	90.45	17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5A7V858	2.7e-72	87.18	17.3 kDa class II heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BUN1	2.7e-72	87.18	17.3 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC10349368...	[more]
A0A0A0L5D4	8.1e-69	85.99	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646350 PE=3 S...	[more]

BLAST of Lcy12g018270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982419.1	1.0e-73	91.08	17.1 kDa class II heat shock protein-like [Cucurbita maxima]	[more]
XP_022941228.1	8.5e-73	90.45	17.1 kDa class II heat shock protein-like [Cucurbita moschata]	[more]
KAG7037701.1	1.5e-72	89.81	17.2 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023524411.1	3.2e-72	89.81	17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_008452768.1	5.5e-72	87.18	PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo] >KAA0064522....	[more]

BLAST of Lcy12g018270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12020.1	3.1e-44	60.13	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	1.5e-43	58.17	heat shock protein 17.6A	[more]
AT1G54050.1	5.2e-20	46.90	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	2.4e-17	37.84	heat shock protein 18.2	[more]
AT1G53540.1	5.4e-17	37.16	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..155 e-value: 7.6E-36 score: 125.1
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 32..150
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 51..155 e-value: 3.0E-29 score: 101.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 41..155 score: 27.839077
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..157
None	No IPR available	PANTHER	PTHR11527:SF273	18.8 KDA CLASS II HEAT SHOCK PROTEIN-LIKE	coord: 9..156
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 51..138 e-value: 2.47335E-31 score: 106.099
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 9..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g018270.1	Lcy12g018270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding