Lcy12g011570 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g011570
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Squamosa promoter-binding protein
Location	Chr12: 39099436 .. 39100588 (+)
RNA-Seq Expression	Lcy12g011570
Synteny	Lcy12g011570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACATTCTGTCATTCACTGTTCCATCATCCAAACTGGCACTCACAAAGAAAAAACTGTGGTCCTCACCACCTTTTACTTTCCTACCTTTTTTCCCTTGCATTCTCCTAGTCTTGATGTAACTTCTAAGTTCCTATATTTTTGCTCCCATCCTTTCCACAAGCACCCTCATCAACACCCACCGTCATCGAGCTGTTGGAGTTGGCGATGGAGGCGAAGAGCTTCGAAGGCAAGCATAACTTTAAGGATAAGGCATATAGGGAAGCCATGGTCGATGACGATTTAGATTACGAGACGGAGGAGGAAGAGCTTGGTGGAGGAGGCCCTGGTGGTAGCAATGGTTGCACTGCATTGGGTTGTTCTGAGAATGAGAAAAAGAAAAGAGGGACAGCAGTTCCCGGCCGTGGAAGGTCCGGTGGAGGCGTCTCTTTGCCGAGTTGCCAAGCACATAATTGTACAACAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCACAAGGTCTGCGAGTTTCACTCGAAGGCGGCCGTCGTCATGGTCGCTGGAATTCGCCAGCGTTTCTGTCAGCAATGCAGCAGGTATTTGATCCTCTTTAACAAATATAAATCAGAACACTTCTGTTAGCATTCTTTCCCCTTTCTGTTTGGCTATGGTAATATGTTGGTGGTGGTGATGATCAGGTTCCATGAGTTATCAGAATTTGATGAAGCTAAACGGAGCTGTCGCCGGAGGCTGGCAGGGCACAATGAACGGAGGCGAAAGAGCTCGGCCGAGTGCCAAGGGGAAAGCACGAGCCGCAAAGGACCAGCTCCGCAGTCGAAGGAAAGCCATTGCAGGCAGCTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGCTATAAGCACCTGCATATCAGATAAAAGAGACCATCTATGAATCTTTGCTCTCTCTCTTCTGTCACTAGGAAATGAAAGACATCCAAAGAATGCCATGTTTTCCTTGAAGTTTGGCTTCACCAACAACATCTCAGTTTGGTGCTTTGTTTTTTTCTGTCTTAATTTTCAAATAATTTGGACTGGTCTGTTTCTTGTTTTGTGGTCCCTTGTCTATGTACTAAAATATTGCACCTCTGGTTATGAAATTTAATATGCAGAG

mRNA sequence

TGGACATTCTGTCATTCACTGTTCCATCATCCAAACTGGCACTCACAAAGAAAAAACTGTGGTCCTCACCACCTTTTACTTTCCTACCTTTTTTCCCTTGCATTCTCCTAGTCTTGATGTAACTTCTAAGTTCCTATATTTTTGCTCCCATCCTTTCCACAAGCACCCTCATCAACACCCACCGTCATCGAGCTGTTGGAGTTGGCGATGGAGGCGAAGAGCTTCGAAGGCAAGCATAACTTTAAGGATAAGGCATATAGGGAAGCCATGGTCGATGACGATTTAGATTACGAGACGGAGGAGGAAGAGCTTGGTGGAGGAGGCCCTGGTGGTAGCAATGGTTGCACTGCATTGGGTTGTTCTGAGAATGAGAAAAAGAAAAGAGGGACAGCAGTTCCCGGCCGTGGAAGGTCCGGTGGAGGCGTCTCTTTGCCGAGTTGCCAAGCACATAATTGTACAACAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCACAAGGTCTGCGAGTTTCACTCGAAGGCGGCCGTCGTCATGGTCGCTGGAATTCGCCAGCGTTTCTGTCAGCAATGCAGCAGGTTCCATGAGTTATCAGAATTTGATGAAGCTAAACGGAGCTGTCGCCGGAGGCTGGCAGGGCACAATGAACGGAGGCGAAAGAGCTCGGCCGAGTGCCAAGGGGAAAGCACGAGCCGCAAAGGACCAGCTCCGCAGTCGAAGGAAAGCCATTGCAGGCAGCTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGCTATAAGCACCTGCATATCAGATAAAAGAGACCATCTATGAATCTTTGCTCTCTCTCTTCTGTCACTAGGAAATGAAAGACATCCAAAGAATGCCATGTTTTCCTTGAAGTTTGGCTTCACCAACAACATCTCAGTTTGGTGCTTTGTTTTTTTCTGTCTTAATTTTCAAATAATTTGGACTGGTCTGTTTCTTGTTTTGTGGTCCCTTGTCTATGTACTAAAATATTGCACCTCTGGTTATGAAATTTAATATGCAGAG

Coding sequence (CDS)

ATGGAGGCGAAGAGCTTCGAAGGCAAGCATAACTTTAAGGATAAGGCATATAGGGAAGCCATGGTCGATGACGATTTAGATTACGAGACGGAGGAGGAAGAGCTTGGTGGAGGAGGCCCTGGTGGTAGCAATGGTTGCACTGCATTGGGTTGTTCTGAGAATGAGAAAAAGAAAAGAGGGACAGCAGTTCCCGGCCGTGGAAGGTCCGGTGGAGGCGTCTCTTTGCCGAGTTGCCAAGCACATAATTGTACAACAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCACAAGGTCTGCGAGTTTCACTCGAAGGCGGCCGTCGTCATGGTCGCTGGAATTCGCCAGCGTTTCTGTCAGCAATGCAGCAGGTTCCATGAGTTATCAGAATTTGATGAAGCTAAACGGAGCTGTCGCCGGAGGCTGGCAGGGCACAATGAACGGAGGCGAAAGAGCTCGGCCGAGTGCCAAGGGGAAAGCACGAGCCGCAAAGGACCAGCTCCGCAGTCGAAGGAAAGCCATTGCAGGCAGCTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGCTATAAGCACCTGCATATCAGATAA

Protein sequence

MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRGTAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR

Homology

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BLAST of Lcy12g011570 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.5e-35
Identity = 94/204 (46.08%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           ME K  +G+   K K+Y   +V++D++ +T+EEE  G                   + RG
Sbjct: 1   MEGKRSQGQGYMKKKSY---LVEEDMETDTDEEEEVG-----------------RDRVRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           +    RG    G SL  CQ   CT D+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQ
Sbjct: 61  S----RGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE-CQGESTSRKGPAPQSKESHCRQLV 180
           QCSRFH+L EFDEAKRSCRRRLAGHNERRRKSS E   GE + R+G   Q        + 
Sbjct: 121 QCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV------VMQ 174

Query: 181 EDQRSRIQMA-PPGSSGYKHLHIR 203
             +RSR++M  P  +S +K   IR
Sbjct: 181 NQERSRVEMTLPMPNSSFKRPQIR 174

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BLAST of Lcy12g011570 vs. ExPASy Swiss-Prot
Match: Q6Z461 (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL13 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-33
Identity = 76/127 (59.84%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 36  GGGGPGGSNGCTALGCSENEKK-------KRGTAVPGRGRSGGGVSLPSCQAHNCTTDLS 95
           GGGG   S+   A G S +          +RG    G G   GG   P CQ   C  DLS
Sbjct: 61  GGGGGSSSSAAVAAGASSSSSSSSVAAAARRGAGRAGGGAPSGGGGGPRCQVERCGVDLS 120

Query: 96  EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNER 155
           EA RY+RRHKVC+ HSK  VV+VAG+RQRFCQQCSRFHEL+EFD+AKRSCRRRLAGHNER
Sbjct: 121 EAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGHNER 180

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BLAST of Lcy12g011570 vs. ExPASy Swiss-Prot
Match: Q9S758 (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.8e-33
Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           ME +  + +   KDKA    +V+++++   + EE  GG               +E K++ 
Sbjct: 1   MEGQRTQRRGYLKDKATVSNLVEEEMENGMDGEEEDGG---------------DEDKRKK 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
                RG S   V    CQ   CT +L+EAK+Y+RRH+VCE H+KA+   VAG+RQRFCQ
Sbjct: 61  VMERVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL EFDEAKRSCRRRLAGHNERRRK S +  GE + R+G + Q  ++  R  V+
Sbjct: 121 QCSRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQLIQTQERNRVD 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
                 +  P  +S +K   IR
Sbjct: 181 ------RKLPMTNSSFKRPQIR 181

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BLAST of Lcy12g011570 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 55  EKKKRGTAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGI 114
           E  K+  A+   G+   G +  SCQ  NC  +++ AK YHRRHKVCEFH+KA VV+ +G+
Sbjct: 29  EDSKKTRALTPSGKRASGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGL 88

Query: 115 RQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS 154
           +QRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS
Sbjct: 89  QQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS 127

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BLAST of Lcy12g011570 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-30
Identity = 75/155 (48.39%), Postives = 96/155 (61.94%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           M     EGK + ++ +  E   ++  D +T EEE                    EKK++G
Sbjct: 3   MRRSKAEGKRSLRELSEEEEEEEETEDEDTFEEE-----------------EALEKKQKG 62

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            A      S  GV    CQ  +CT D+S+AK+YH+RHKVC+FH+KA  V ++G+ QRFCQ
Sbjct: 63  KAT-----SSSGV----CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQ 122

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE 156
           QCSRFH LSEFDEAKRSCRRRLAGHNERRRKS+ +
Sbjct: 123 QCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

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BLAST of Lcy12g011570 vs. ExPASy TrEMBL
Match: A0A6J1FEY0 (squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443461 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 177/202 (87.62%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAY+E ++DDDL+YETEEE++GGGG GG+N CTALG  ENEKKKRG
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           T+V GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TSVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAECQGEST+RKG A QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQRSRIQMAP GSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Lcy12g011570 vs. ExPASy TrEMBL
Match: A0A6J1IJV6 (squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476934 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.6e-96
Identity = 178/202 (88.12%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAYRE +VDDDL+YETEEE++GGGG GG+N CTALG  ENEKKKRG
Sbjct: 1   MEAKSYEGKHNLKDKAYREGVVDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           TAV GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGVGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAECQGEST+RKGPA QSKE  CRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAECQGESTNRKGPASQSKEGQCRQLME 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQR+RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRTRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Lcy12g011570 vs. ExPASy TrEMBL
Match: A0A0A0L3D9 (Squamosa promoter-binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G631590 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.8e-90
Identity = 176/206 (85.44%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGG--SNGCTALGCSENEKKK 60
           M+AKSFEGKHNFKDK     +VDDD +YETEEEE+GGGG GG  SN C ALG  +NEKKK
Sbjct: 1   MDAKSFEGKHNFKDK----TVVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKK 60

Query: 61  RGTAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRF 120
           RG AV GRG+SGG VSLPSCQAHNC  DLSEAKRYHRRHKVCEFHSKAA+VMVAGIRQRF
Sbjct: 61  RGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRF 120

Query: 121 CQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAP--QSKESHCR 180
           CQQCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAE QGESTSRKG AP  QSKESHCR
Sbjct: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCR 180

Query: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 203
           QLVEDQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 202

[Close]

BLAST of Lcy12g011570 vs. ExPASy TrEMBL
Match: A0A5D3DWS3 (Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001760 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 169/204 (82.84%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPG-GSNGCTALGCSENEKKKR 60
           M+AKSFEGKHN KDK     +VDDD +YETEEEE+GGGG G  SN C ALG  +NEK+KR
Sbjct: 1   MDAKSFEGKHNSKDK----TVVDDDFEYETEEEEVGGGGGGSNSNACNALGYFDNEKRKR 60

Query: 61  GTAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFC 120
           G AV GRG+SGG VS PSCQAHNC  DLSEAKRYHRRHKVCEFHSKAA+VMVAGIRQRFC
Sbjct: 61  GAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFC 120

Query: 121 QQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRK-GPAPQSKESHCRQL 180
           QQCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAE QGESTSRK  P  QSKESHCRQL
Sbjct: 121 QQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQL 180

Query: 181 VEDQRSRIQMAPPGSSGYKHLHIR 203
           VEDQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 VEDQRSRIQMAPPGSSGYKHLHIR 200

[Close]

BLAST of Lcy12g011570 vs. ExPASy TrEMBL
Match: A0A1S4E4C7 (squamosa promoter-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501851 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.5e-78
Identity = 158/203 (77.83%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           M+AKSFEGKHN KDK     +VDDD +YETEEEE+GGGG                +K++G
Sbjct: 1   MDAKSFEGKHNSKDK----TVVDDDFEYETEEEEVGGGG---------------GEKEKG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            AV GRG+SGG VS PSCQAHNC  DLSEAKRYHRRHKVCEFHSKAA+VMVAGIRQRFCQ
Sbjct: 61  AAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRK-GPAPQSKESHCRQLV 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAE QGESTSRK  P  QSKESHCRQLV
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLV 180

Query: 181 EDQRSRIQMAPPGSSGYKHLHIR 203
           EDQRSRIQMAPPGSSGYKHLHIR
Sbjct: 181 EDQRSRIQMAPPGSSGYKHLHIR 184

[Close]

BLAST of Lcy12g011570 vs. NCBI nr
Match: XP_022937043.1 (squamosa promoter-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 9.2e-96
Identity = 177/202 (87.62%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAY+E ++DDDL+YETEEE++GGGG GG+N CTALG  ENEKKKRG
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           T+V GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TSVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAECQGEST+RKG A QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQRSRIQMAP GSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Lcy12g011570 vs. NCBI nr
Match: XP_023536105.1 (squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 177/202 (87.62%), Postives = 188/202 (93.07%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAY+E ++DDDL+YETEEE++GGGG GG+N CTALG  ENEKKKRG
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           TAV GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAECQGEST+RKG   QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSVSQSKEGHCRQLME 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQRSRIQMAP GSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Lcy12g011570 vs. NCBI nr
Match: XP_022976580.1 (squamosa promoter-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 178/202 (88.12%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAYRE +VDDDL+YETEEE++GGGG GG+N CTALG  ENEKKKRG
Sbjct: 1   MEAKSYEGKHNLKDKAYREGVVDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           TAV GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGVGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAECQGEST+RKGPA QSKE  CRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAECQGESTNRKGPASQSKEGQCRQLME 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQR+RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRTRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Lcy12g011570 vs. NCBI nr
Match: KAG7024822.1 (Squamosa promoter-binding-like protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.5 bits (916), Expect = 7.8e-95
Identity = 176/202 (87.13%), Postives = 188/202 (93.07%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAY+E ++DDDL+YETEEE++GGGG GG+N CTALG  ENEKKKRG
Sbjct: 47  MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 106

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           TAV GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 107 TAVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 166

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFD+AKRSCRRRLAGHNERRRKSSAECQGEST+RKG A QSKE HCRQL+E
Sbjct: 167 QCSRFHELTEFDDAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 226

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQRSRIQMAP GSSGYK LHIR
Sbjct: 227 DQRSRIQMAPTGSSGYKQLHIR 248

[Close]

BLAST of Lcy12g011570 vs. NCBI nr
Match: KAG6591949.1 (Squamosa promoter-binding-like protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.4 bits (908), Expect = 6.6e-94
Identity = 175/202 (86.63%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           MEAKS+EGKHN KDKAY+E ++DDDL+YETEEE++G GG GG+N CTALG  ENEKKKRG
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGRGGHGGTNACTALGYYENEKKKRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           TAV GRGRSG GVS PSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFD+AKRSCRRRLAGHNERRRKSSAECQGEST+RKG A QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDDAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
           DQRSRIQMAP GSSGYK LHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKQLHIR 202

[Close]

BLAST of Lcy12g011570 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 149.1 bits (375), Expect = 3.9e-36
Identity = 94/204 (46.08%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           ME K  +G+   K K+Y   +V++D++ +T+EEE  G                   + RG
Sbjct: 1   MEGKRSQGQGYMKKKSY---LVEEDMETDTDEEEEVG-----------------RDRVRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           +    RG    G SL  CQ   CT D+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQ
Sbjct: 61  S----RGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE-CQGESTSRKGPAPQSKESHCRQLV 180
           QCSRFH+L EFDEAKRSCRRRLAGHNERRRKSS E   GE + R+G   Q        + 
Sbjct: 121 QCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV------VMQ 174

Query: 181 EDQRSRIQMA-PPGSSGYKHLHIR 203
             +RSR++M  P  +S +K   IR
Sbjct: 181 NQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Lcy12g011570 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 149.1 bits (375), Expect = 3.9e-36
Identity = 94/204 (46.08%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           ME K  +G+   K K+Y   +V++D++ +T+EEE  G                   + RG
Sbjct: 1   MEGKRSQGQGYMKKKSY---LVEEDMETDTDEEEEVG-----------------RDRVRG 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           +    RG    G SL  CQ   CT D+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQ
Sbjct: 61  S----RGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE-CQGESTSRKGPAPQSKESHCRQLV 180
           QCSRFH+L EFDEAKRSCRRRLAGHNERRRKSS E   GE + R+G   Q        + 
Sbjct: 121 QCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV------VMQ 174

Query: 181 EDQRSRIQMA-PPGSSGYKHLHIR 203
             +RSR++M  P  +S +K   IR
Sbjct: 181 NQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Lcy12g011570 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-34
Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           ME +  + +   KDKA    +V+++++   + EE  GG               +E K++ 
Sbjct: 1   MEGQRTQRRGYLKDKATVSNLVEEEMENGMDGEEEDGG---------------DEDKRKK 60

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
                RG S   V    CQ   CT +L+EAK+Y+RRH+VCE H+KA+   VAG+RQRFCQ
Sbjct: 61  VMERVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGPAPQSKESHCRQLVE 180
           QCSRFHEL EFDEAKRSCRRRLAGHNERRRK S +  GE + R+G + Q  ++  R  V+
Sbjct: 121 QCSRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQLIQTQERNRVD 180

Query: 181 DQRSRIQMAPPGSSGYKHLHIR 203
                 +  P  +S +K   IR
Sbjct: 181 ------RKLPMTNSSFKRPQIR 181

[Close]

BLAST of Lcy12g011570 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 75/155 (48.39%), Postives = 96/155 (61.94%), Query Frame = 0


Query: 1   MEAKSFEGKHNFKDKAYREAMVDDDLDYETEEEELGGGGPGGSNGCTALGCSENEKKKRG 60
           M     EGK + ++ +  E   ++  D +T EEE                    EKK++G
Sbjct: 3   MRRSKAEGKRSLRELSEEEEEEEETEDEDTFEEE-----------------EALEKKQKG 62

Query: 61  TAVPGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            A      S  GV    CQ  +CT D+S+AK+YH+RHKVC+FH+KA  V ++G+ QRFCQ
Sbjct: 63  KAT-----SSSGV----CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQ 122

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE 156
           QCSRFH LSEFDEAKRSCRRRLAGHNERRRKS+ +
Sbjct: 123 QCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]

BLAST of Lcy12g011570 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 64/106 (60.38%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 64  PGRGRSGGGVSLPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 123
           PG       +S P CQA  C  DLS AK YHRRHKVCEFHSKA+ V+ AG+ QRFCQQCS
Sbjct: 174 PGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 233

Query: 124 RFHELSEFDEAKRSCRRRLAGHNERRRK---SSAECQGESTSRKGP 167
           RFH LSEFD  KRSCR+RLA HN RRRK   S++  Q   T +  P
Sbjct: 234 RFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDTGTGKTTP 279

The following BLAST results are available for this feature:

BLAST of Lcy12g011570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7A9	5.5e-35	46.08	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4...	[more]
Q6Z461	1.0e-33	59.84	Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9S758	6.8e-33	43.07	Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5...	[more]
Q38741	1.3e-31	66.67	Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV...	[more]
P93015	4.1e-30	48.39	Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3...	[more]

BLAST of Lcy12g011570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEY0	4.5e-96	87.62	squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IJV6	7.6e-96	88.12	squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A0A0L3D9	4.8e-90	85.44	Squamosa promoter-binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G631590 PE=...	[more]
A0A5D3DWS3	5.5e-86	82.84	Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S4E4C7	2.5e-78	77.83	squamosa promoter-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501851...	[more]

BLAST of Lcy12g011570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937043.1	9.2e-96	87.62	squamosa promoter-binding protein 1-like [Cucurbita moschata]	[more]
XP_023536105.1	1.2e-95	87.62	squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976580.1	1.6e-95	88.12	squamosa promoter-binding protein 1-like [Cucurbita maxima]	[more]
KAG7024822.1	7.8e-95	87.13	Squamosa promoter-binding-like protein 5, partial [Cucurbita argyrosperma subsp....	[more]
KAG6591949.1	6.6e-94	86.63	Squamosa promoter-binding-like protein 5, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Lcy12g011570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53160.2	3.9e-36	46.08	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	3.9e-36	46.08	squamosa promoter binding protein-like 4	[more]
AT3G15270.1	4.8e-34	43.07	squamosa promoter binding protein-like 5	[more]
AT2G33810.1	2.9e-31	48.39	squamosa promoter binding protein-like 3	[more]
AT1G02065.1	2.1e-29	60.38	squamosa promoter binding protein-like 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 68..139 e-value: 1.0E-32 score: 114.1
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 76..155
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 78..151 e-value: 1.1E-31 score: 108.9
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 75..152 score: 32.205513
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 68..153 e-value: 7.3E-47 score: 155.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..202
None	No IPR available	PANTHER	PTHR31251:SF149	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN	coord: 8..202
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 8..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g011570.1	Lcy12g011570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding