Lcy12g010250 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g010250
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionHeterodimeric geranylgeranyl pyrophosphate synthase small subunit
LocationChr12: 37499601 .. 37500564 (+)
RNA-Seq ExpressionLcy12g010250
SyntenyLcy12g010250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTTTTCTTTCATCTCTTTTCTCTGTGCTTCATTTTCTTCATCTCTAATGGCGATCTCTCTCAATCTCCTGCAAGTCCATGGAAATTCAATTCTGCCCAAGTTCACGATATCGAACCCGGTCCGACCGGCAGTTCATTTCAGAGCTCCGGCCAGGACCACCGTCATCATGTCGCAGAGTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTGTACAAGCCGTTGGGCCATTTCGTCTTCTCGGCCCCACGAAATTCGGCTCCCGCGCTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCGCCGGGATCAGGCCATGGCGGCAGCCACGGCACTCCAAATCACCCATGCCGCACTGTACACTAGGGAGTACCCTCCACTGACGGCGCGTGCGAACTCACGCGCCGCCGTGGCTGACCGTGCATACGGTCCGAACATCCAGCTTCTGACCGGGGTTGGAATAGCTCCAATTGGGTTCGAGATTCTGGCGGGGTCGTGCGATTGGAGCGAGAGCGGGTCGGAGCGGACTCTCCGTGTGATGGCGGAAATGGCACGCGCCATGGGGACGAACGGGTGGATTGGGGGGCAGTTGCGGGGATTGGAGGAGGAGGCAACGGCGGAGGAAGTGAGCGAGAAGACGGAAGGTGGGCTACACGCGTGTGGGGGCGCGTGTGGGGCGATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAGATGAGGAAGTTTGGTAAATTGGTGGGGATGGTGAAAGGATTGTCTAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAGAGAGAAAATTGAGGAGTTGAAGATTTTGGCTTTGAAGGAATTGGAAGGTTTCAAAGGGGAAAATGTTCATGAGATCTATGGCTTCCTTGATTTTGAGGGGCTTTAGAAGAAAGAAATG

mRNA sequence

TGGTTTTTCTTTCATCTCTTTTCTCTGTGCTTCATTTTCTTCATCTCTAATGGCGATCTCTCTCAATCTCCTGCAAGTCCATGGAAATTCAATTCTGCCCAAGTTCACGATATCGAACCCGGTCCGACCGGCAGTTCATTTCAGAGCTCCGGCCAGGACCACCGTCATCATGTCGCAGAGTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTGTACAAGCCGTTGGGCCATTTCGTCTTCTCGGCCCCACGAAATTCGGCTCCCGCGCTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCGCCGGGATCAGGCCATGGCGGCAGCCACGGCACTCCAAATCACCCATGCCGCACTGTACACTAGGGAGTACCCTCCACTGACGGCGCGTGCGAACTCACGCGCCGCCGTGGCTGACCGTGCATACGGTCCGAACATCCAGCTTCTGACCGGGGTTGGAATAGCTCCAATTGGGTTCGAGATTCTGGCGGGGTCGTGCGATTGGAGCGAGAGCGGGTCGGAGCGGACTCTCCGTGTGATGGCGGAAATGGCACGCGCCATGGGGACGAACGGGTGGATTGGGGGGCAGTTGCGGGGATTGGAGGAGGAGGCAACGGCGGAGGAAGTGAGCGAGAAGACGGAAGGTGGGCTACACGCGTGTGGGGGCGCGTGTGGGGCGATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAGATGAGGAAGTTTGGTAAATTGGTGGGGATGGTGAAAGGATTGTCTAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAGAGAGAAAATTGAGGAGTTGAAGATTTTGGCTTTGAAGGAATTGGAAGGTTTCAAAGGGGAAAATGTTCATGAGATCTATGGCTTCCTTGATTTTGAGGGGCTTTAGAAGAAAGAAATG

Coding sequence (CDS)

ATGGCGATCTCTCTCAATCTCCTGCAAGTCCATGGAAATTCAATTCTGCCCAAGTTCACGATATCGAACCCGGTCCGACCGGCAGTTCATTTCAGAGCTCCGGCCAGGACCACCGTCATCATGTCGCAGAGTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTGTACAAGCCGTTGGGCCATTTCGTCTTCTCGGCCCCACGAAATTCGGCTCCCGCGCTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCGCCGGGATCAGGCCATGGCGGCAGCCACGGCACTCCAAATCACCCATGCCGCACTGTACACTAGGGAGTACCCTCCACTGACGGCGCGTGCGAACTCACGCGCCGCCGTGGCTGACCGTGCATACGGTCCGAACATCCAGCTTCTGACCGGGGTTGGAATAGCTCCAATTGGGTTCGAGATTCTGGCGGGGTCGTGCGATTGGAGCGAGAGCGGGTCGGAGCGGACTCTCCGTGTGATGGCGGAAATGGCACGCGCCATGGGGACGAACGGGTGGATTGGGGGGCAGTTGCGGGGATTGGAGGAGGAGGCAACGGCGGAGGAAGTGAGCGAGAAGACGGAAGGTGGGCTACACGCGTGTGGGGGCGCGTGTGGGGCGATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAGATGAGGAAGTTTGGTAAATTGGTGGGGATGGTGAAAGGATTGTCTAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAGAGAGAAAATTGAGGAGTTGAAGATTTTGGCTTTGAAGGAATTGGAAGGTTTCAAAGGGGAAAATGTTCATGAGATCTATGGCTTCCTTGATTTTGAGGGGCTTTAG

Protein sequence

MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQSPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEGL
Homology
BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 7.7e-25
Identity = 80/268 (29.85%), Postives = 129/268 (48.13%), Query Frame = 0

Query: 46  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQ 105
           +YW  +  +I   L   IP K P  +Y+ + + V +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 106 AMAAATALQITHAA-LYTREYPPLTARANSRAAVADR-AYGPNIQLLTGVGIAPIGFEIL 165
           A   A AL++ HAA L   + P +      R   ++   YG  + +L G  + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168

Query: 166 AGSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLE-EEATAEEVSEKTEGGLHACG 225
                         LR++ E+AR +G+ G   GQ   LE        V EK  G +  C 
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228

Query: 226 GACGAILGGGSEEEIEKMRKFGKLVGMVKGL-------SKNVFGGKENERKREKIEELKI 285
             CG +LGG +E+E++ +R++G+ VGM+  +        K  + G   +   E  EELK 
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288

Query: 286 LALKELEGFK-----GENVHEIYGFLDF 298
            A KEL+ F      G+ +  +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316

BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match: Q9SLG2 (Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20
Identity = 74/287 (25.78%), Postives = 131/287 (45.64%), Query Frame = 0

Query: 47  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
           Y  +  E I   L   IP  +P  ++K + + + +  +   P LC+AACELVGG    A+
Sbjct: 84  YMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAI 143

Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
            AA A+++ H     ++  P     + R       + +G ++ +L+G  +  + FE L  
Sbjct: 144 QAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE 203

Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEA---------TAEEVSEKTEG 226
               ++  S++ +R + E+A+++GT G + GQ + L  E            E +     G
Sbjct: 204 ----ADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTG 263

Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
            L       GA++GGG+E+EIEK+R F + +G++                  K   K+  
Sbjct: 264 SLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKV 323

Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
            GK         E+ +E +E+LK  A + L+GF  + V  +    +F
Sbjct: 324 AGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNF 366

BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match: O04046 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GGPPS2 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20
Identity = 75/287 (26.13%), Postives = 127/287 (44.25%), Query Frame = 0

Query: 47  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
           Y  +  E +   L   IP  +P  +++ + + + +A +   P LC+A+CELVGG+ + AM
Sbjct: 88  YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147

Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
            AA A+++ H     ++  P     + R       + YG  + +L+G  +  + FE +  
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT- 207

Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTEG 226
               +E  SER +  + E+AR++GT G + GQ   +  E            E +      
Sbjct: 208 ---TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTA 267

Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
            L       GAI+GGGS+EEIE +RKF + +G++                  K   K+  
Sbjct: 268 VLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQL 327

Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
            GK         E+ +E ++ L   A + L+GF  E V  +     F
Sbjct: 328 AGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTF 370

BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.5e-20
Identity = 64/213 (30.05%), Postives = 105/213 (49.30%), Query Frame = 0

Query: 46  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQA 105
           SY       I   L   IP ++P  +++ + + + +  +   PALC+AACELVGG    A
Sbjct: 81  SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140

Query: 106 MAAATALQITHAALYTREYPPLTARANSRAAVADR--AYGPNIQLLTGVGIAPIGFEILA 165
           M AA A+++ H      +  P     + R         +G ++ +L G  +    FE +A
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIA 200

Query: 166 GSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTE-------GG 225
            S       S R +R + E+A+A+G  G + GQ+  +  E ++E   EK E         
Sbjct: 201 VST--LNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAK 260

Query: 226 LHACGGACGAILGGGSEEEIEKMRKFGKLVGMV 250
           L       GAILGGG++EE+EK+RK+ + +G++
Sbjct: 261 LLEGAVVLGAILGGGTDEEVEKLRKYARDIGLL 291

BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 2.8e-19
Identity = 60/215 (27.91%), Postives = 102/215 (47.44%), Query Frame = 0

Query: 46  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQA 105
           SY     E +   L   +P ++P  +++ + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 106 MAAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILA 165
           M AA A+++ H      +  P     + R       + +G ++ +L G  +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 166 GSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTE 225
            +         R +R + E+A+A+GT G + GQ+  +  E            E +     
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 226 GGLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV 250
             L       GAI+GGGS++EIE++RKF + +G++
Sbjct: 258 AALLEASAVLGAIVGGGSDDEIERLRKFARCIGLL 292

BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match: A0A6J1IK44 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111475905 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 1.1e-125
Identity = 238/304 (78.29%), Postives = 260/304 (85.53%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+HGN  LPKF  SN +RPAV+FRAP R TV+MSQ +PSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RR+I AKDPP VY+PLGHFVFSAPRNSA A+CIAACE VGG RDQAMAAATALQ+ +AA 
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
           YTREYPPLTAR +S AA+ DR Y PNIQLLTGVGIAPIGFEILAGSCD SESGS+R  RV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEE---EATAEEVSEKTEGGLHACGGACGAILGGGSEEEI 240
           M EMARAMG+ GWIGGQ + LEE    A AEEV EKTEG LHA GGACGAILG GSEEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 241 EKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 300
           EKMRK+G++VGMVKGLSK VFGGKENERKREKI+ELK LA KELEGFKGE V ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match: A0A5A7SLD5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29549G00010 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.6e-124
Identity = 233/301 (77.41%), Postives = 257/301 (85.38%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+  N   PKF  +N V PA + R P R+TV MSQ +PSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVGG RDQAMAAATA+Q+ HAA 
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
            T EYPPLTA + +RAAV +R Y P+IQL+TG GIAP+GFEILA SCDWSE GSER  RV
Sbjct: 121 CTHEYPPLTA-SGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
           M E++RAMGT GWIGGQ RGL+EEAT EEV EK EGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
           RK+GKLVGMVKGL+KNVFGGKENE+KREKIEELK+LA KELEGF GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300

BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match: A0A0A0K8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.2e-122
Identity = 227/298 (76.17%), Postives = 252/298 (84.56%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+  N   PKF  +N + P  + R P R+  +MSQ +PSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RRVIP KDP AVY+PLGHF+FSAPRNSAPALCIAACELVGG RDQAMAAATA+Q+ +AA 
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
            T EYPPLTAR   RA+V DR YG N+QL+TG GI P+GFEILA SCDWSE GSER  RV
Sbjct: 121 CTHEYPPLTAR-GKRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
           M E+ARAMGT GWIGGQ RGLEEEAT EEV EKTEGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
           RK+GKLVG+VKGL++ VFGGKENERKREKIEELK+LA KELEGF GE V +IYGFLDF
Sbjct: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 297

BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match: A0A1S4DWU7 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990910 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 2.3e-96
Identity = 188/268 (70.15%), Postives = 215/268 (80.22%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+  N   PKF  +N V PA + R P R+TV MSQ +PSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVGG RDQAMAAATA+Q+ HAA 
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
            T EYPPLTA + +RAAV +R Y P+IQL+TG GIAP+GFEILA SCDWSE GSER  RV
Sbjct: 121 CTHEYPPLTA-SGTRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
           M E++RAMGT GWIGGQ RGL+EEAT EEV EK EGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKRE 268
           RK+GKL+       +  +  +  ER++E
Sbjct: 241 RKYGKLI------EERRWRNRRQERRKE 261

BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match: A0A2N9F8D7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 148/299 (49.50%), Postives = 202/299 (67.56%), Query Frame = 0

Query: 9   QVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQSPSYWAAINEDIEDHLRRVIPAKDP 68
           +++GN      + S+ VRP++  R+     + MSQ+ SYWA++N +IE HL++ IP + P
Sbjct: 7   RLNGNQTFHILSRSSAVRPSLPHRS---MMITMSQNQSYWASVNSEIEAHLKQAIPLRPP 66

Query: 69  PAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLT 128
             V++P+ H VF+AP+N+APALC+AACELVGG RDQAMAAA+AL + HAA +T E+ PLT
Sbjct: 67  LQVFEPMHHLVFAAPQNTAPALCLAACELVGGHRDQAMAAASALHLMHAASFTHEHLPLT 126

Query: 129 ARANSRA-AVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRVMAEMARAM 188
            R   ++  V   AYGPNI+LL G  I P GFE+LA S D +++ S+R LRV  E+ RAM
Sbjct: 127 DRPRPKSRPVIHHAYGPNIELLLGDAIIPFGFELLARSDDPAQNNSDRILRVTIEITRAM 186

Query: 189 GTNGWIGGQLRGLE----------EEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIE 248
           G+ G + GQ   LE          +    E+V +K EGGLHACG ACGAILGGGSEEEIE
Sbjct: 187 GSQGMVEGQYYELECPQSDGEELCDVGWIEQVCKKKEGGLHACGAACGAILGGGSEEEIE 246

Query: 249 KMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 297
           K+R+FG  VGM++G+      G++ +  +E +EEL+ LALKELE FKG  V  I  F++
Sbjct: 247 KLRRFGLYVGMIQGMLHG--AGRKEKGLKEVVEELRNLALKELEEFKGRKVEAISSFVN 300

BLAST of Lcy12g010250 vs. NCBI nr
Match: XP_038896497.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 507.3 bits (1305), Expect = 9.1e-140
Identity = 257/301 (85.38%), Postives = 271/301 (90.03%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+  N   PKF   NPVRPAV+FRAPAR+TV+MSQ +PSYWA INEDIEDHL
Sbjct: 1   MAISLNLLQLQANPARPKFLKWNPVRPAVYFRAPARSTVVMSQITPSYWATINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           R+VIPAKDPPAV++PLGHF+FSAPRNSAPALCIAACELVGGRRD+AMAAATALQ+ HAA 
Sbjct: 61  RQVIPAKDPPAVFEPLGHFIFSAPRNSAPALCIAACELVGGRRDKAMAAATALQLIHAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
           YTREYPPLTAR  SRAAV DR YG NIQLLTG  IAPI FEILAGSCDWSESGSER   V
Sbjct: 121 YTREYPPLTAREISRAAVVDRIYGANIQLLTGDAIAPIVFEILAGSCDWSESGSERVQHV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
           M EMARAMGT GW+GGQ RGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM
Sbjct: 181 MVEMARAMGTEGWVGGQFRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240

Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
           RK+GKLVGMVKGLSKNVFGGKENERKREKIEE K+LA K LEGFKGE VHEIYGFLDFEG
Sbjct: 241 RKYGKLVGMVKGLSKNVFGGKENERKREKIEEFKVLAFKVLEGFKGEKVHEIYGFLDFEG 300

BLAST of Lcy12g010250 vs. NCBI nr
Match: XP_023536167.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 7.2e-129
Identity = 243/301 (80.73%), Postives = 262/301 (87.04%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+HGN  LPKF  SN +RPAV+FRAPAR TV+MSQ +PSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RRVI AKDPPAVY+PLGHFVFSAPRNSA A+CIAACELVGG RDQAMAAATALQ+ +AA 
Sbjct: 61  RRVIIAKDPPAVYEPLGHFVFSAPRNSAAAMCIAACELVGGHRDQAMAAATALQLIYAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
           YTREYPPLTAR  S AAV DR YGPNIQLLTGVGIAPIGFEILAGSCD SESGSER  RV
Sbjct: 121 YTREYPPLTARGISNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
           M EMARAMG+ GWIGGQ + LEE   AEEV E TEG LHA GGACGAILGGGSEEEIEKM
Sbjct: 181 MVEMARAMGSEGWIGGQFKELEEVTAAEEVIEMTEGELHARGGACGAILGGGSEEEIEKM 240

Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
           RK+G++VGMVKGLSK VFGGKENERKREKI+ELK LA KELEGFKG+ V ++  F DFEG
Sbjct: 241 RKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGQKVDQMCNFFDFEG 300

BLAST of Lcy12g010250 vs. NCBI nr
Match: KAG6592047.1 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024925.1 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466.1 bits (1198), Expect = 2.3e-127
Identity = 243/304 (79.93%), Postives = 262/304 (86.18%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+HGN  LPKF  SN +RPAV+FRAPAR TV+MSQ +PSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RRVI AKDPP VY+PL HFVFSAPRNSA A+CIAACELVGGRRDQAMAAATALQ+ +AA 
Sbjct: 61  RRVIIAKDPPEVYEPLSHFVFSAPRNSAAAMCIAACELVGGRRDQAMAAATALQLIYAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
           YTREYPPLTAR +S AAV DR YGPNIQLLTGVGIAPIGFEILAGSCD SESGSER  RV
Sbjct: 121 YTREYPPLTARGSSNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATA---EEVSEKTEGGLHACGGACGAILGGGSEEEI 240
           MAEMARAMG+ GWIGGQ + LEE   A   EEV E TEG LHA GGACGAILGGG+EEEI
Sbjct: 181 MAEMARAMGSEGWIGGQFKELEEVTAAVETEEVIEMTEGELHARGGACGAILGGGNEEEI 240

Query: 241 EKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 300
           EKMRK+G++VGMVKGLSK VFGGKENERKREKI ELK LA KELEGFKGE V ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKINELKALAFKELEGFKGEKVDQMCNFFD 300

BLAST of Lcy12g010250 vs. NCBI nr
Match: XP_022975728.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 459.5 bits (1181), Expect = 2.2e-125
Identity = 238/304 (78.29%), Postives = 260/304 (85.53%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+HGN  LPKF  SN +RPAV+FRAP R TV+MSQ +PSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RR+I AKDPP VY+PLGHFVFSAPRNSA A+CIAACE VGG RDQAMAAATALQ+ +AA 
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
           YTREYPPLTAR +S AA+ DR Y PNIQLLTGVGIAPIGFEILAGSCD SESGS+R  RV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEE---EATAEEVSEKTEGGLHACGGACGAILGGGSEEEI 240
           M EMARAMG+ GWIGGQ + LEE    A AEEV EKTEG LHA GGACGAILG GSEEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 241 EKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 300
           EKMRK+G++VGMVKGLSK VFGGKENERKREKI+ELK LA KELEGFKGE V ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

BLAST of Lcy12g010250 vs. NCBI nr
Match: KAA0031902.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 5.3e-124
Identity = 233/301 (77.41%), Postives = 257/301 (85.38%), Query Frame = 0

Query: 1   MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
           MAISLNLLQ+  N   PKF  +N V PA + R P R+TV MSQ +PSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
           RRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVGG RDQAMAAATA+Q+ HAA 
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
            T EYPPLTA + +RAAV +R Y P+IQL+TG GIAP+GFEILA SCDWSE GSER  RV
Sbjct: 121 CTHEYPPLTA-SGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
           M E++RAMGT GWIGGQ RGL+EEAT EEV EK EGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
           RK+GKLVGMVKGL+KNVFGGKENE+KREKIEELK+LA KELEGF GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300

BLAST of Lcy12g010250 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-26
Identity = 80/268 (29.85%), Postives = 129/268 (48.13%), Query Frame = 0

Query: 46  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQ 105
           +YW  +  +I   L   IP K P  +Y+ + + V +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 106 AMAAATALQITHAA-LYTREYPPLTARANSRAAVADR-AYGPNIQLLTGVGIAPIGFEIL 165
           A   A AL++ HAA L   + P +      R   ++   YG  + +L G  + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168

Query: 166 AGSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLE-EEATAEEVSEKTEGGLHACG 225
                         LR++ E+AR +G+ G   GQ   LE        V EK  G +  C 
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228

Query: 226 GACGAILGGGSEEEIEKMRKFGKLVGMVKGL-------SKNVFGGKENERKREKIEELKI 285
             CG +LGG +E+E++ +R++G+ VGM+  +        K  + G   +   E  EELK 
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288

Query: 286 LALKELEGFK-----GENVHEIYGFLDF 298
            A KEL+ F      G+ +  +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316

BLAST of Lcy12g010250 vs. TAIR 10
Match: AT2G18640.1 (geranylgeranyl pyrophosphate synthase 4 )

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-21
Identity = 74/287 (25.78%), Postives = 131/287 (45.64%), Query Frame = 0

Query: 47  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
           Y  +  E I   L   IP  +P  ++K + + + +  +   P LC+AACELVGG    A+
Sbjct: 84  YMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAI 143

Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
            AA A+++ H     ++  P     + R       + +G ++ +L+G  +  + FE L  
Sbjct: 144 QAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE 203

Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEA---------TAEEVSEKTEG 226
               ++  S++ +R + E+A+++GT G + GQ + L  E            E +     G
Sbjct: 204 ----ADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTG 263

Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
            L       GA++GGG+E+EIEK+R F + +G++                  K   K+  
Sbjct: 264 SLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKV 323

Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
            GK         E+ +E +E+LK  A + L+GF  + V  +    +F
Sbjct: 324 AGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNF 366

BLAST of Lcy12g010250 vs. TAIR 10
Match: AT2G23800.1 (geranylgeranyl pyrophosphate synthase 2 )

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-21
Identity = 75/287 (26.13%), Postives = 127/287 (44.25%), Query Frame = 0

Query: 47  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
           Y  +  E +   L   IP  +P  +++ + + + +A +   P LC+A+CELVGG+ + AM
Sbjct: 88  YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147

Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
            AA A+++ H     ++  P     + R       + YG  + +L+G  +  + FE +  
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT- 207

Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTEG 226
               +E  SER +  + E+AR++GT G + GQ   +  E            E +      
Sbjct: 208 ---TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTA 267

Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
            L       GAI+GGGS+EEIE +RKF + +G++                  K   K+  
Sbjct: 268 VLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQL 327

Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
            GK         E+ +E ++ L   A + L+GF  E V  +     F
Sbjct: 328 AGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTF 370

BLAST of Lcy12g010250 vs. TAIR 10
Match: AT3G14510.1 (Polyprenyl synthetase family protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20
Identity = 76/262 (29.01%), Postives = 121/262 (46.18%), Query Frame = 0

Query: 61  RVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALY 120
           R +P ++P  V + + + + +  +   P LCIA CELVGG    AM+AA A+++ H +  
Sbjct: 7   RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66

Query: 121 TREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLR 180
             +  P    A+ R       + +G ++ +L G  +  + FE +          SER +R
Sbjct: 67  IHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMT-VVSSGLVASERMIR 126

Query: 181 VMAEMARAMGTNGWIGGQLRGLEEE---------ATAEEVSEKTEGGLHACGGACGAILG 240
            + E+ARA+GT G + GQ+  L  E            E +       L       GAI+G
Sbjct: 127 AVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMG 186

Query: 241 GGSEEEIEKMRKFGKLVGMV------------------KGLSKNVFGGKEN-------ER 287
           GG+EEEIEK+RK+ + +G++                  K   K+V  GK         ER
Sbjct: 187 GGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 246

BLAST of Lcy12g010250 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20
Identity = 60/215 (27.91%), Postives = 102/215 (47.44%), Query Frame = 0

Query: 46  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQA 105
           SY     E +   L   +P ++P  +++ + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 106 MAAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILA 165
           M AA A+++ H      +  P     + R       + +G ++ +L G  +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 166 GSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTE 225
            +         R +R + E+A+A+GT G + GQ+  +  E            E +     
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 226 GGLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV 250
             L       GAI+GGGS++EIE++RKF + +G++
Sbjct: 258 AALLEASAVLGAIVGGGSDDEIERLRKFARCIGLL 292

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q391087.7e-2529.85Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
Q9SLG22.6e-2025.78Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4... [more]
O040464.4e-2026.13Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidops... [more]
Q94ID77.5e-2030.05Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39... [more]
P348022.8e-1927.91Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast... [more]
Match NameE-valueIdentityDescription
A0A6J1IK441.1e-12578.29heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
A0A5A7SLD52.6e-12477.41Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel... [more]
A0A0A0K8P99.2e-12276.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1[more]
A0A1S4DWU72.3e-9670.15heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
A0A2N9F8D71.2e-6849.50Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038896497.19.1e-14085.38heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
XP_023536167.17.2e-12980.73heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
KAG6592047.12.3e-12779.93Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
XP_022975728.12.2e-12578.29heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
KAA0031902.15.3e-12477.41heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ... [more]
Match NameE-valueIdentityDescription
AT4G38460.15.5e-2629.85geranylgeranyl reductase [more]
AT2G18640.11.8e-2125.78geranylgeranyl pyrophosphate synthase 4 [more]
AT2G23800.13.1e-2126.13geranylgeranyl pyrophosphate synthase 2 [more]
AT3G14510.11.5e-2029.01Polyprenyl synthetase family protein [more]
AT4G36810.12.0e-2027.91geranylgeranyl pyrophosphate synthase 1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 39..298
e-value: 8.9E-42
score: 145.0
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 46..249
NoneNo IPR availablePANTHERPTHR43281FARNESYL DIPHOSPHATE SYNTHASEcoord: 9..296
NoneNo IPR availablePANTHERPTHR43281:SF6HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKEcoord: 9..296

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g010250.1Lcy12g010250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004659 prenyltransferase activity