Homology
BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match:
Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)
HSP 1 Score: 115.9 bits (289), Expect = 7.7e-25
Identity = 80/268 (29.85%), Postives = 129/268 (48.13%), Query Frame = 0
Query: 46 SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQ 105
+YW + +I L IP K P +Y+ + + V + + + P +C+AACEL GG R
Sbjct: 49 TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108
Query: 106 AMAAATALQITHAA-LYTREYPPLTARANSRAAVADR-AYGPNIQLLTGVGIAPIGFEIL 165
A A AL++ HAA L + P + R ++ YG + +L G + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168
Query: 166 AGSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLE-EEATAEEVSEKTEGGLHACG 225
LR++ E+AR +G+ G GQ LE V EK G + C
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228
Query: 226 GACGAILGGGSEEEIEKMRKFGKLVGMVKGL-------SKNVFGGKENERKREKIEELKI 285
CG +LGG +E+E++ +R++G+ VGM+ + K + G + E EELK
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288
Query: 286 LALKELEGFK-----GENVHEIYGFLDF 298
A KEL+ F G+ + +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316
BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match:
Q9SLG2 (Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4 PE=2 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20
Identity = 74/287 (25.78%), Postives = 131/287 (45.64%), Query Frame = 0
Query: 47 YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
Y + E I L IP +P ++K + + + + + P LC+AACELVGG A+
Sbjct: 84 YMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAI 143
Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
AA A+++ H ++ P + R + +G ++ +L+G + + FE L
Sbjct: 144 QAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE 203
Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEA---------TAEEVSEKTEG 226
++ S++ +R + E+A+++GT G + GQ + L E E + G
Sbjct: 204 ----ADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTG 263
Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
L GA++GGG+E+EIEK+R F + +G++ K K+
Sbjct: 264 SLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKV 323
Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
GK E+ +E +E+LK A + L+GF + V + +F
Sbjct: 324 AGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNF 366
BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match:
O04046 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GGPPS2 PE=1 SV=2)
HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20
Identity = 75/287 (26.13%), Postives = 127/287 (44.25%), Query Frame = 0
Query: 47 YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
Y + E + L IP +P +++ + + + +A + P LC+A+CELVGG+ + AM
Sbjct: 88 YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147
Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
AA A+++ H ++ P + R + YG + +L+G + + FE +
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT- 207
Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTEG 226
+E SER + + E+AR++GT G + GQ + E E +
Sbjct: 208 ---TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTA 267
Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
L GAI+GGGS+EEIE +RKF + +G++ K K+
Sbjct: 268 VLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQL 327
Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
GK E+ +E ++ L A + L+GF E V + F
Sbjct: 328 AGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTF 370
BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match:
Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 7.5e-20
Identity = 64/213 (30.05%), Postives = 105/213 (49.30%), Query Frame = 0
Query: 46 SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQA 105
SY I L IP ++P +++ + + + + + PALC+AACELVGG A
Sbjct: 81 SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140
Query: 106 MAAATALQITHAALYTREYPPLTARANSRAAVADR--AYGPNIQLLTGVGIAPIGFEILA 165
M AA A+++ H + P + R +G ++ +L G + FE +A
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIA 200
Query: 166 GSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTE-------GG 225
S S R +R + E+A+A+G G + GQ+ + E ++E EK E
Sbjct: 201 VST--LNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAK 260
Query: 226 LHACGGACGAILGGGSEEEIEKMRKFGKLVGMV 250
L GAILGGG++EE+EK+RK+ + +G++
Sbjct: 261 LLEGAVVLGAILGGGTDEEVEKLRKYARDIGLL 291
BLAST of Lcy12g010250 vs. ExPASy Swiss-Prot
Match:
P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)
HSP 1 Score: 97.4 bits (241), Expect = 2.8e-19
Identity = 60/215 (27.91%), Postives = 102/215 (47.44%), Query Frame = 0
Query: 46 SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQA 105
SY E + L +P ++P +++ + + + + + P LCIAACELVGG A
Sbjct: 78 SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137
Query: 106 MAAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILA 165
M AA A+++ H + P + R + +G ++ +L G + FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197
Query: 166 GSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTE 225
+ R +R + E+A+A+GT G + GQ+ + E E +
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257
Query: 226 GGLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV 250
L GAI+GGGS++EIE++RKF + +G++
Sbjct: 258 AALLEASAVLGAIVGGGSDDEIERLRKFARCIGLL 292
BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match:
A0A6J1IK44 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111475905 PE=4 SV=1)
HSP 1 Score: 459.5 bits (1181), Expect = 1.1e-125
Identity = 238/304 (78.29%), Postives = 260/304 (85.53%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+HGN LPKF SN +RPAV+FRAP R TV+MSQ +PSYWAAINEDIE+HL
Sbjct: 1 MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RR+I AKDPP VY+PLGHFVFSAPRNSA A+CIAACE VGG RDQAMAAATALQ+ +AA
Sbjct: 61 RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
YTREYPPLTAR +S AA+ DR Y PNIQLLTGVGIAPIGFEILAGSCD SESGS+R RV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEE---EATAEEVSEKTEGGLHACGGACGAILGGGSEEEI 240
M EMARAMG+ GWIGGQ + LEE A AEEV EKTEG LHA GGACGAILG GSEEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240
Query: 241 EKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 300
EKMRK+G++VGMVKGLSK VFGGKENERKREKI+ELK LA KELEGFKGE V ++ F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300
BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match:
A0A5A7SLD5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29549G00010 PE=4 SV=1)
HSP 1 Score: 454.9 bits (1169), Expect = 2.6e-124
Identity = 233/301 (77.41%), Postives = 257/301 (85.38%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+ N PKF +N V PA + R P R+TV MSQ +PSYWAAINEDIEDHL
Sbjct: 1 MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVGG RDQAMAAATA+Q+ HAA
Sbjct: 61 RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
T EYPPLTA + +RAAV +R Y P+IQL+TG GIAP+GFEILA SCDWSE GSER RV
Sbjct: 121 CTHEYPPLTA-SGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
M E++RAMGT GWIGGQ RGL+EEAT EEV EK EGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240
Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
RK+GKLVGMVKGL+KNVFGGKENE+KREKIEELK+LA KELEGF GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300
BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match:
A0A0A0K8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1)
HSP 1 Score: 446.4 bits (1147), Expect = 9.2e-122
Identity = 227/298 (76.17%), Postives = 252/298 (84.56%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+ N PKF +N + P + R P R+ +MSQ +PSYWAAINEDIEDHL
Sbjct: 1 MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RRVIP KDP AVY+PLGHF+FSAPRNSAPALCIAACELVGG RDQAMAAATA+Q+ +AA
Sbjct: 61 RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
T EYPPLTAR RA+V DR YG N+QL+TG GI P+GFEILA SCDWSE GSER RV
Sbjct: 121 CTHEYPPLTAR-GKRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
M E+ARAMGT GWIGGQ RGLEEEAT EEV EKTEGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240
Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
RK+GKLVG+VKGL++ VFGGKENERKREKIEELK+LA KELEGF GE V +IYGFLDF
Sbjct: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 297
BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match:
A0A1S4DWU7 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990910 PE=4 SV=1)
HSP 1 Score: 362.1 bits (928), Expect = 2.3e-96
Identity = 188/268 (70.15%), Postives = 215/268 (80.22%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+ N PKF +N V PA + R P R+TV MSQ +PSYWAAINEDIEDHL
Sbjct: 1 MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVGG RDQAMAAATA+Q+ HAA
Sbjct: 61 RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
T EYPPLTA + +RAAV +R Y P+IQL+TG GIAP+GFEILA SCDWSE GSER RV
Sbjct: 121 CTHEYPPLTA-SGTRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
M E++RAMGT GWIGGQ RGL+EEAT EEV EK EGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240
Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKRE 268
RK+GKL+ + + + ER++E
Sbjct: 241 RKYGKLI------EERRWRNRRQERRKE 261
BLAST of Lcy12g010250 vs. ExPASy TrEMBL
Match:
A0A2N9F8D7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1)
HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 148/299 (49.50%), Postives = 202/299 (67.56%), Query Frame = 0
Query: 9 QVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQSPSYWAAINEDIEDHLRRVIPAKDP 68
+++GN + S+ VRP++ R+ + MSQ+ SYWA++N +IE HL++ IP + P
Sbjct: 7 RLNGNQTFHILSRSSAVRPSLPHRS---MMITMSQNQSYWASVNSEIEAHLKQAIPLRPP 66
Query: 69 PAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLT 128
V++P+ H VF+AP+N+APALC+AACELVGG RDQAMAAA+AL + HAA +T E+ PLT
Sbjct: 67 LQVFEPMHHLVFAAPQNTAPALCLAACELVGGHRDQAMAAASALHLMHAASFTHEHLPLT 126
Query: 129 ARANSRA-AVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRVMAEMARAM 188
R ++ V AYGPNI+LL G I P GFE+LA S D +++ S+R LRV E+ RAM
Sbjct: 127 DRPRPKSRPVIHHAYGPNIELLLGDAIIPFGFELLARSDDPAQNNSDRILRVTIEITRAM 186
Query: 189 GTNGWIGGQLRGLE----------EEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIE 248
G+ G + GQ LE + E+V +K EGGLHACG ACGAILGGGSEEEIE
Sbjct: 187 GSQGMVEGQYYELECPQSDGEELCDVGWIEQVCKKKEGGLHACGAACGAILGGGSEEEIE 246
Query: 249 KMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 297
K+R+FG VGM++G+ G++ + +E +EEL+ LALKELE FKG V I F++
Sbjct: 247 KLRRFGLYVGMIQGMLHG--AGRKEKGLKEVVEELRNLALKELEEFKGRKVEAISSFVN 300
BLAST of Lcy12g010250 vs. NCBI nr
Match:
XP_038896497.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 507.3 bits (1305), Expect = 9.1e-140
Identity = 257/301 (85.38%), Postives = 271/301 (90.03%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+ N PKF NPVRPAV+FRAPAR+TV+MSQ +PSYWA INEDIEDHL
Sbjct: 1 MAISLNLLQLQANPARPKFLKWNPVRPAVYFRAPARSTVVMSQITPSYWATINEDIEDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
R+VIPAKDPPAV++PLGHF+FSAPRNSAPALCIAACELVGGRRD+AMAAATALQ+ HAA
Sbjct: 61 RQVIPAKDPPAVFEPLGHFIFSAPRNSAPALCIAACELVGGRRDKAMAAATALQLIHAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
YTREYPPLTAR SRAAV DR YG NIQLLTG IAPI FEILAGSCDWSESGSER V
Sbjct: 121 YTREYPPLTAREISRAAVVDRIYGANIQLLTGDAIAPIVFEILAGSCDWSESGSERVQHV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
M EMARAMGT GW+GGQ RGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM
Sbjct: 181 MVEMARAMGTEGWVGGQFRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
RK+GKLVGMVKGLSKNVFGGKENERKREKIEE K+LA K LEGFKGE VHEIYGFLDFEG
Sbjct: 241 RKYGKLVGMVKGLSKNVFGGKENERKREKIEEFKVLAFKVLEGFKGEKVHEIYGFLDFEG 300
BLAST of Lcy12g010250 vs. NCBI nr
Match:
XP_023536167.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 471.1 bits (1211), Expect = 7.2e-129
Identity = 243/301 (80.73%), Postives = 262/301 (87.04%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+HGN LPKF SN +RPAV+FRAPAR TV+MSQ +PSYWAAINEDI+DHL
Sbjct: 1 MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RRVI AKDPPAVY+PLGHFVFSAPRNSA A+CIAACELVGG RDQAMAAATALQ+ +AA
Sbjct: 61 RRVIIAKDPPAVYEPLGHFVFSAPRNSAAAMCIAACELVGGHRDQAMAAATALQLIYAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
YTREYPPLTAR S AAV DR YGPNIQLLTGVGIAPIGFEILAGSCD SESGSER RV
Sbjct: 121 YTREYPPLTARGISNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
M EMARAMG+ GWIGGQ + LEE AEEV E TEG LHA GGACGAILGGGSEEEIEKM
Sbjct: 181 MVEMARAMGSEGWIGGQFKELEEVTAAEEVIEMTEGELHARGGACGAILGGGSEEEIEKM 240
Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
RK+G++VGMVKGLSK VFGGKENERKREKI+ELK LA KELEGFKG+ V ++ F DFEG
Sbjct: 241 RKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGQKVDQMCNFFDFEG 300
BLAST of Lcy12g010250 vs. NCBI nr
Match:
KAG6592047.1 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024925.1 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 466.1 bits (1198), Expect = 2.3e-127
Identity = 243/304 (79.93%), Postives = 262/304 (86.18%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+HGN LPKF SN +RPAV+FRAPAR TV+MSQ +PSYWAAINEDI+DHL
Sbjct: 1 MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RRVI AKDPP VY+PL HFVFSAPRNSA A+CIAACELVGGRRDQAMAAATALQ+ +AA
Sbjct: 61 RRVIIAKDPPEVYEPLSHFVFSAPRNSAAAMCIAACELVGGRRDQAMAAATALQLIYAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
YTREYPPLTAR +S AAV DR YGPNIQLLTGVGIAPIGFEILAGSCD SESGSER RV
Sbjct: 121 YTREYPPLTARGSSNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATA---EEVSEKTEGGLHACGGACGAILGGGSEEEI 240
MAEMARAMG+ GWIGGQ + LEE A EEV E TEG LHA GGACGAILGGG+EEEI
Sbjct: 181 MAEMARAMGSEGWIGGQFKELEEVTAAVETEEVIEMTEGELHARGGACGAILGGGNEEEI 240
Query: 241 EKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 300
EKMRK+G++VGMVKGLSK VFGGKENERKREKI ELK LA KELEGFKGE V ++ F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKINELKALAFKELEGFKGEKVDQMCNFFD 300
BLAST of Lcy12g010250 vs. NCBI nr
Match:
XP_022975728.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 459.5 bits (1181), Expect = 2.2e-125
Identity = 238/304 (78.29%), Postives = 260/304 (85.53%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+HGN LPKF SN +RPAV+FRAP R TV+MSQ +PSYWAAINEDIE+HL
Sbjct: 1 MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RR+I AKDPP VY+PLGHFVFSAPRNSA A+CIAACE VGG RDQAMAAATALQ+ +AA
Sbjct: 61 RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
YTREYPPLTAR +S AA+ DR Y PNIQLLTGVGIAPIGFEILAGSCD SESGS+R RV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEE---EATAEEVSEKTEGGLHACGGACGAILGGGSEEEI 240
M EMARAMG+ GWIGGQ + LEE A AEEV EKTEG LHA GGACGAILG GSEEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240
Query: 241 EKMRKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLD 300
EKMRK+G++VGMVKGLSK VFGGKENERKREKI+ELK LA KELEGFKGE V ++ F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300
BLAST of Lcy12g010250 vs. NCBI nr
Match:
KAA0031902.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])
HSP 1 Score: 454.9 bits (1169), Expect = 5.3e-124
Identity = 233/301 (77.41%), Postives = 257/301 (85.38%), Query Frame = 0
Query: 1 MAISLNLLQVHGNSILPKFTISNPVRPAVHFRAPARTTVIMSQ-SPSYWAAINEDIEDHL 60
MAISLNLLQ+ N PKF +N V PA + R P R+TV MSQ +PSYWAAINEDIEDHL
Sbjct: 1 MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60
Query: 61 RRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAAL 120
RRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVGG RDQAMAAATA+Q+ HAA
Sbjct: 61 RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120
Query: 121 YTREYPPLTARANSRAAVADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLRV 180
T EYPPLTA + +RAAV +R Y P+IQL+TG GIAP+GFEILA SCDWSE GSER RV
Sbjct: 121 CTHEYPPLTA-SGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180
Query: 181 MAEMARAMGTNGWIGGQLRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240
M E++RAMGT GWIGGQ RGL+EEAT EEV EK EGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240
Query: 241 RKFGKLVGMVKGLSKNVFGGKENERKREKIEELKILALKELEGFKGENVHEIYGFLDFEG 300
RK+GKLVGMVKGL+KNVFGGKENE+KREKIEELK+LA KELEGF GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300
BLAST of Lcy12g010250 vs. TAIR 10
Match:
AT4G38460.1 (geranylgeranyl reductase )
HSP 1 Score: 115.9 bits (289), Expect = 5.5e-26
Identity = 80/268 (29.85%), Postives = 129/268 (48.13%), Query Frame = 0
Query: 46 SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQ 105
+YW + +I L IP K P +Y+ + + V + + + P +C+AACEL GG R
Sbjct: 49 TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108
Query: 106 AMAAATALQITHAA-LYTREYPPLTARANSRAAVADR-AYGPNIQLLTGVGIAPIGFEIL 165
A A AL++ HAA L + P + R ++ YG + +L G + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168
Query: 166 AGSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLE-EEATAEEVSEKTEGGLHACG 225
LR++ E+AR +G+ G GQ LE V EK G + C
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228
Query: 226 GACGAILGGGSEEEIEKMRKFGKLVGMVKGL-------SKNVFGGKENERKREKIEELKI 285
CG +LGG +E+E++ +R++G+ VGM+ + K + G + E EELK
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288
Query: 286 LALKELEGFK-----GENVHEIYGFLDF 298
A KEL+ F G+ + +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316
BLAST of Lcy12g010250 vs. TAIR 10
Match:
AT2G18640.1 (geranylgeranyl pyrophosphate synthase 4 )
HSP 1 Score: 100.9 bits (250), Expect = 1.8e-21
Identity = 74/287 (25.78%), Postives = 131/287 (45.64%), Query Frame = 0
Query: 47 YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
Y + E I L IP +P ++K + + + + + P LC+AACELVGG A+
Sbjct: 84 YMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAI 143
Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
AA A+++ H ++ P + R + +G ++ +L+G + + FE L
Sbjct: 144 QAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE 203
Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEA---------TAEEVSEKTEG 226
++ S++ +R + E+A+++GT G + GQ + L E E + G
Sbjct: 204 ----ADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTG 263
Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
L GA++GGG+E+EIEK+R F + +G++ K K+
Sbjct: 264 SLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKV 323
Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
GK E+ +E +E+LK A + L+GF + V + +F
Sbjct: 324 AGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNF 366
BLAST of Lcy12g010250 vs. TAIR 10
Match:
AT2G23800.1 (geranylgeranyl pyrophosphate synthase 2 )
HSP 1 Score: 100.1 bits (248), Expect = 3.1e-21
Identity = 75/287 (26.13%), Postives = 127/287 (44.25%), Query Frame = 0
Query: 47 YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAM 106
Y + E + L IP +P +++ + + + +A + P LC+A+CELVGG+ + AM
Sbjct: 88 YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147
Query: 107 AAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAG 166
AA A+++ H ++ P + R + YG + +L+G + + FE +
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT- 207
Query: 167 SCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTEG 226
+E SER + + E+AR++GT G + GQ + E E +
Sbjct: 208 ---TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTA 267
Query: 227 GLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV------------------KGLSKNVF 286
L GAI+GGGS+EEIE +RKF + +G++ K K+
Sbjct: 268 VLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQL 327
Query: 287 GGKEN-------ERKREKIEELKILALKELEGFKGENVHEIYGFLDF 298
GK E+ +E ++ L A + L+GF E V + F
Sbjct: 328 AGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTF 370
BLAST of Lcy12g010250 vs. TAIR 10
Match:
AT3G14510.1 (Polyprenyl synthetase family protein )
HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20
Identity = 76/262 (29.01%), Postives = 121/262 (46.18%), Query Frame = 0
Query: 61 RVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALY 120
R +P ++P V + + + + + + P LCIA CELVGG AM+AA A+++ H +
Sbjct: 7 RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66
Query: 121 TREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILAGSCDWSESGSERTLR 180
+ P A+ R + +G ++ +L G + + FE + SER +R
Sbjct: 67 IHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMT-VVSSGLVASERMIR 126
Query: 181 VMAEMARAMGTNGWIGGQLRGLEEE---------ATAEEVSEKTEGGLHACGGACGAILG 240
+ E+ARA+GT G + GQ+ L E E + L GAI+G
Sbjct: 127 AVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMG 186
Query: 241 GGSEEEIEKMRKFGKLVGMV------------------KGLSKNVFGGKEN-------ER 287
GG+EEEIEK+RK+ + +G++ K K+V GK ER
Sbjct: 187 GGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 246
BLAST of Lcy12g010250 vs. TAIR 10
Match:
AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )
HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20
Identity = 60/215 (27.91%), Postives = 102/215 (47.44%), Query Frame = 0
Query: 46 SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQA 105
SY E + L +P ++P +++ + + + + + P LCIAACELVGG A
Sbjct: 78 SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137
Query: 106 MAAATALQITHAALYTREYPPLTARANSRAA--VADRAYGPNIQLLTGVGIAPIGFEILA 165
M AA A+++ H + P + R + +G ++ +L G + FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197
Query: 166 GSCDWSESGSERTLRVMAEMARAMGTNGWIGGQLRGLEEEAT---------AEEVSEKTE 225
+ R +R + E+A+A+GT G + GQ+ + E E +
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257
Query: 226 GGLHACGGACGAILGGGSEEEIEKMRKFGKLVGMV 250
L GAI+GGGS++EIE++RKF + +G++
Sbjct: 258 AALLEASAVLGAIVGGGSDDEIERLRKFARCIGLL 292
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q39108 | 7.7e-25 | 29.85 | Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
Q9SLG2 | 2.6e-20 | 25.78 | Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4... | [more] |
O04046 | 4.4e-20 | 26.13 | Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidops... | [more] |
Q94ID7 | 7.5e-20 | 30.05 | Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39... | [more] |
P34802 | 2.8e-19 | 27.91 | Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IK44 | 1.1e-125 | 78.29 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
A0A5A7SLD5 | 2.6e-124 | 77.41 | Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel... | [more] |
A0A0A0K8P9 | 9.2e-122 | 76.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1 | [more] |
A0A1S4DWU7 | 2.3e-96 | 70.15 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
A0A2N9F8D7 | 1.2e-68 | 49.50 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_038896497.1 | 9.1e-140 | 85.38 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
XP_023536167.1 | 7.2e-129 | 80.73 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
KAG6592047.1 | 2.3e-127 | 79.93 | Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
XP_022975728.1 | 2.2e-125 | 78.29 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... | [more] |
KAA0031902.1 | 5.3e-124 | 77.41 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ... | [more] |