Lcy11g015770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g015770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Poly(A)-specific ribonuclease PARN
Location	Chr11: 37563317 .. 37567338 (+)
RNA-Seq Expression	Lcy11g015770
Synteny	Lcy11g015770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACGCCTCGCCCTCTTTGGGCTCTCACGCGGCTGCTTTGCTTCATCAGAACGGCAGCCTATTCCTCCGTCGCCGTTAATGCTCCGGCCACCGCCTCTAACTCCACTTTTCCCCTCAAGAATGTGACCAAGAAGAACTTCGAAGCTGCGCTATCGGAGCTTCGGAGCCATGTCCGAGCTGCGGATTTCGTTGCCATCGACCTCGAGATGACCGGCATCACCAGCGCACCTTGGCGAGAATCGTTCGAGTTCGATCGCTTTGATGTTCGCTACCTTAAAGTCAAGGACTCCGCCGAGAAGTTCGCTGTTCTTCAATTCGGCGTCTGCCCGTTCCGTTGGGACTCTGCCAAGAACTCATTCATCGCTCATCCGTAATTGATTTTCTTCTTTGTTTGATTTGGATTTCGTTTGGGTACTGCGCAATTTCGTTCCAACCAAGCTGTATAGCCAGCTTACAGTGATGGAGAAATGATTTCTTTTCGTGGAATTTGACATTGTACCGCTCTTTGAGTTGCAGGCATAATTTCTTTGTCTTCCCGCGCCGAGAAATTCAAGTTGATGGCACTTCTTCCGAGTTCCTGTGCCAGACAACCTCCATCGAATTCTTGGCTAAATACCAGTTTGATTTCAACGCTTGTATATACGAAGGTAGTTTGTTTTCATGTTTCTCCTTGACTCTATGGATAGAAAATTAATCTTCAAGATACGAAGACTGCATCGAATTCAGTTTATACGATTATTCAGTCTGATTGCCAAGCACAATCGTAAACTTTTTAATCATTTCATTGCCTGGCTCTTTTGGTCGTCTCGGATTTTGAGAACTTGAATTGTAATTAATCTCAGGAATATCTTATTTGTCCAGAGCACATGAAGATGCGGCACGCAAAAGCCTGGATTTTGCATATGGGGATGAAATGTCAGATAAATCTTCTAATGTGACTAATATTAGGGATAAGAAGAGGATCGGCATTGCTGATGTTTTATTCAAGGAAAGAATGAAAAACAGATTGCATGAATGGCGGGACAGATTACTATCTGAGAGAAACATGGAGTTCCAGGGCCAGGAATGCTCGAATAATTACCAACGAAAATTTGAAACCATTTTCTTCAAGATGCGCCCTGCTCTTAGCTTGAGCGATTTCACCTCTCATCAGACAAGGTTGATTCAGCTGGTAAGATAGATTTTTTCCCTCGATAAATGGAGGTTTAAGCGTTCAGATAGTGATAAAGTTGTTCTTTCATATTTGATATGAATTTAAACTTTAATGCCCAAGTTTGTGTGCTTACTTAATATGGGACATGAAATATGATGGAAATTAGAGTAGTGGGAAATGTGATTTTAGTATTCTAGGAGGTTGGTTATTTTTTGAAGTTGCTAGATGCATTGTACTTGTATCTTTTGTTTGTTCTGTGAAGAAACTAAGGGTGTGTTTGGTTCAACTTTTCAAATGTTTAATTTTGAAAAAAAATCATTTTGAAAAAATTTATAGTGTTTGGCAACCACTAAAAATGACTTATTAGAAAATGAAATTGAGAAATAAATCATTTTGAGAGAAACACTTGAAACAAACTTTTTCAAAAAGAGTTTTAAATATGCAATAACTTGTGTCTAAGAACACTTATGAGGAAATGTAACCAAACACATGAATGTTTAAATTTTAGTCAATTTTTATGCAAAATGTTTTTAAAAAAATGCATTCTTGAAAATCATTTAAATTAAAATGTATTCCAAACGGACCCTAACTCTCTGTGACAAAATATTTTTCTTATATTTTTCTTATCCAATATTTGGCTAGTTATTCATCAAGTCTGTTTATGCTTGGTAGCATGTTAGTTAGTTTAACTGTATGAAGAATATTAATCATTCAATCTCCTTTCTGTGAGATAACTTGATGCTATTTCTTTAAGTGATGTTCATGTGGAGGAGAACACATGCAGGTAATTAAGAAGCATTTTGAGGATCTTTGTTTTGTTGTCGTGGATGGCGGCGATGCTGATCTACAACAATTAGTTGTGTACGTGGATTCTAGAGATGATGAAGAGCTGCTCATGGTTAGACACTTTCCTTTTATCAGTCTCTTATGAAAAGAAAGTGAAAGACACTTTCCTTTTATGCCATCACGGAACTTTGACTAGAAACTAGGAAGTGAGATAGTTGAAATGAACACAAATATCTTGACTTGGTTACTTTTCTTTTTAACCTTTTAATTTACATTTAAATATGTACTTATTAGATGTTTTAGTGCATAAAGCGAAGTGCTCAAAATAGATAAGGTTTCTAAAAATTTGTTGTGAAAATCTATATGTTGTTGTGTATTGGGTCAGCAGTAGTGGAAAACAATATGTGAGGTCTACAGCCTTGCTTGTTGTACTTCATGCTTTTGGAAGAGAAAGATATGTATGTAAAAAGCATAAAAAAAATTTAGGGCCCCTAAAAGCAAATACTAAATATCATAATTAATGCAGAAAGAGGTAAACAGTGATAGGCAGAAAGCAGCTGAAATGAAGATCCAATCTGCAATTGGGTTTCGTCATGTTATCGATCTCCTTTCATTGGAAAAGAAGTTAATTATCGGTCATAATTGCTTCCTTGGTAAGCATTCATCCTTATTTTCATAGTCGATAATTAATTACAAATTCCATTCTCAACTGATACATCTGTTTTCTGGACCAGATATTGCTCACATACACAGCAAATTTATAGGTTCTCTTCCTTCAACTGCTGAAGAATTTGTCTCTTCTATTGGAAAACACTTTCCATACATCATGGACACCAAAATTCTATTAAATGGCAATATCATTCTTCAGCAACGGATGAAGAAGTCTAGCACATCTCTATCCTCTGCATTTGGCTTATTATGCCCACATATTGCTTTTAGCCCTGCCTTCAACTCTGGTGTGCAAGTGGAGGTTCAAGTAGATGATTTAAGGTAGGTTTTTCCTGTCATATGTGGATGGGTAGTCTTTTCAATATTGAACTGCGTCCTAACTCATTGGTGAAATTCTAACTCGCAGACATGAACAATGAATTTTCTGACCATTTGTATGAATTTGCATGTGTGTTTTCCATTGATGTATTGATTATAAGTGTGTTGTTTTCTTGAAGAATTCGAAGATTAATCAAGTGACATCCTGAAATTATTTTGAAACTGAAGGTATTTAACAGTGATTAAAATTTATTATTAAATTCTTATTGCATCTGTGTTTCATTTCAATCTCTGTGCAGATCCTCCAACTGGAATTCTGGAGATAAGCATGAAGCTGGGTACGATGCTTTTATGACAGGATGTGTATTTGCTCAAGCCTGTAATCTAATTGGAATCGATTTCGTACTTCGTTCACCTTCTGAAAATTTAGCTGACAATGAAAAATTGCAGAAGCATGTAAACCATTTGTATTTGAGTTGGGCCAGTGGAGATATTATCGATCTGAGCACCGGTAATAGAATGACCGAGTCTTTGAGGTCTAACAGATCTAAAAAGCATCAAGCGAAAATATCGTTCGAGAACATTGTTTTAATATGGGGATTTCCCGCAAACCTCAATGCAAGGAAGATCAAAGAGAGCATCTCTAAAGTCTTTGGCGTGTCCAATGTCATTAGCGTCTACCATTTGGATGAAAGTGCTGTGTTTGTGCAGTTCGCAAAGCCAGAAATGGTTTCTGAATTTCTTGACCTAAAGGAAAACTTGGAGAGGCATGATAATCCGATATCAGTTTTGCATCCTCTCGCTGAACTTTTTGGAGCTAGAAATACTCATGCTGCAGGCTATGAAGCATACATGAAAATTTGCAGCTCGCCCATTTCTAAACTCTTGTTTTCTGATCAGGCTGAGGCAGTTGGGGTTAATCGAAAGACGAAGTCGACAAAATTTGAGGCAGTAAAGAGCCAAATGCATGAAGCTGCGCACAGATTAACTGTTGATATGTTAGATGAAAACACTGAAATACAGGCGACTGAGATCGGGGCAAATGATATTAGCAGCACTAACTACAGTATTTTACGGTCTTCTTCAATGTAA

mRNA sequence

ATGAATACGCCTCGCCCTCTTTGGGCTCTCACGCGGCTGCTTTGCTTCATCAGAACGGCAGCCTATTCCTCCGTCGCCGTTAATGCTCCGGCCACCGCCTCTAACTCCACTTTTCCCCTCAAGAATGTGACCAAGAAGAACTTCGAAGCTGCGCTATCGGAGCTTCGGAGCCATGTCCGAGCTGCGGATTTCGTTGCCATCGACCTCGAGATGACCGGCATCACCAGCGCACCTTGGCGAGAATCGTTCGAGTTCGATCGCTTTGATGTTCGCTACCTTAAAGTCAAGGACTCCGCCGAGAAGTTCGCTGTTCTTCAATTCGGCGTCTGCCCGTTCCGTTGGGACTCTGCCAAGAACTCATTCATCGCTCATCCGCATAATTTCTTTGTCTTCCCGCGCCGAGAAATTCAAGTTGATGGCACTTCTTCCGAGTTCCTGTGCCAGACAACCTCCATCGAATTCTTGGCTAAATACCAGTTTGATTTCAACGCTTGTATATACGAAGGAATATCTTATTTGTCCAGAGCACATGAAGATGCGGCACGCAAAAGCCTGGATTTTGCATATGGGGATGAAATGTCAGATAAATCTTCTAATGTGACTAATATTAGGGATAAGAAGAGGATCGGCATTGCTGATGTTTTATTCAAGGAAAGAATGAAAAACAGATTGCATGAATGGCGGGACAGATTACTATCTGAGAGAAACATGGAGTTCCAGGGCCAGGAATGCTCGAATAATTACCAACGAAAATTTGAAACCATTTTCTTCAAGATGCGCCCTGCTCTTAGCTTGAGCGATTTCACCTCTCATCAGACAAGGTTGATTCAGCTGGTAATTAAGAAGCATTTTGAGGATCTTTGTTTTGTTGTCGTGGATGGCGGCGATGCTGATCTACAACAATTAGTTGTGTACGTGGATTCTAGAGATGATGAAGAGCTGCTCATGAAAGAGGTAAACAGTGATAGGCAGAAAGCAGCTGAAATGAAGATCCAATCTGCAATTGGGTTTCGTCATGTTATCGATCTCCTTTCATTGGAAAAGAAGTTAATTATCGGTCATAATTGCTTCCTTGATATTGCTCACATACACAGCAAATTTATAGGTTCTCTTCCTTCAACTGCTGAAGAATTTGTCTCTTCTATTGGAAAACACTTTCCATACATCATGGACACCAAAATTCTATTAAATGGCAATATCATTCTTCAGCAACGGATGAAGAAGTCTAGCACATCTCTATCCTCTGCATTTGGCTTATTATGCCCACATATTGCTTTTAGCCCTGCCTTCAACTCTGGTGTGCAAGTGGAGGTTCAAGTAGATGATTTAAGATCCTCCAACTGGAATTCTGGAGATAAGCATGAAGCTGGGTACGATGCTTTTATGACAGGATGTGTATTTGCTCAAGCCTGTAATCTAATTGGAATCGATTTCGTACTTCGTTCACCTTCTGAAAATTTAGCTGACAATGAAAAATTGCAGAAGCATGTAAACCATTTGTATTTGAGTTGGGCCAGTGGAGATATTATCGATCTGAGCACCGGTAATAGAATGACCGAGTCTTTGAGGTCTAACAGATCTAAAAAGCATCAAGCGAAAATATCGTTCGAGAACATTGTTTTAATATGGGGATTTCCCGCAAACCTCAATGCAAGGAAGATCAAAGAGAGCATCTCTAAAGTCTTTGGCGTGTCCAATGTCATTAGCGTCTACCATTTGGATGAAAGTGCTGTGTTTGTGCAGTTCGCAAAGCCAGAAATGGTTTCTGAATTTCTTGACCTAAAGGAAAACTTGGAGAGGCATGATAATCCGATATCAGTTTTGCATCCTCTCGCTGAACTTTTTGGAGCTAGAAATACTCATGCTGCAGGCTATGAAGCATACATGAAAATTTGCAGCTCGCCCATTTCTAAACTCTTGTTTTCTGATCAGGCTGAGGCAGTTGGGGTTAATCGAAAGACGAAGTCGACAAAATTTGAGGCAGTAAAGAGCCAAATGCATGAAGCTGCGCACAGATTAACTGTTGATATGTTAGATGAAAACACTGAAATACAGGCGACTGAGATCGGGGCAAATGATATTAGCAGCACTAACTACAGTATTTTACGGTCTTCTTCAATGTAA

Coding sequence (CDS)

ATGAATACGCCTCGCCCTCTTTGGGCTCTCACGCGGCTGCTTTGCTTCATCAGAACGGCAGCCTATTCCTCCGTCGCCGTTAATGCTCCGGCCACCGCCTCTAACTCCACTTTTCCCCTCAAGAATGTGACCAAGAAGAACTTCGAAGCTGCGCTATCGGAGCTTCGGAGCCATGTCCGAGCTGCGGATTTCGTTGCCATCGACCTCGAGATGACCGGCATCACCAGCGCACCTTGGCGAGAATCGTTCGAGTTCGATCGCTTTGATGTTCGCTACCTTAAAGTCAAGGACTCCGCCGAGAAGTTCGCTGTTCTTCAATTCGGCGTCTGCCCGTTCCGTTGGGACTCTGCCAAGAACTCATTCATCGCTCATCCGCATAATTTCTTTGTCTTCCCGCGCCGAGAAATTCAAGTTGATGGCACTTCTTCCGAGTTCCTGTGCCAGACAACCTCCATCGAATTCTTGGCTAAATACCAGTTTGATTTCAACGCTTGTATATACGAAGGAATATCTTATTTGTCCAGAGCACATGAAGATGCGGCACGCAAAAGCCTGGATTTTGCATATGGGGATGAAATGTCAGATAAATCTTCTAATGTGACTAATATTAGGGATAAGAAGAGGATCGGCATTGCTGATGTTTTATTCAAGGAAAGAATGAAAAACAGATTGCATGAATGGCGGGACAGATTACTATCTGAGAGAAACATGGAGTTCCAGGGCCAGGAATGCTCGAATAATTACCAACGAAAATTTGAAACCATTTTCTTCAAGATGCGCCCTGCTCTTAGCTTGAGCGATTTCACCTCTCATCAGACAAGGTTGATTCAGCTGGTAATTAAGAAGCATTTTGAGGATCTTTGTTTTGTTGTCGTGGATGGCGGCGATGCTGATCTACAACAATTAGTTGTGTACGTGGATTCTAGAGATGATGAAGAGCTGCTCATGAAAGAGGTAAACAGTGATAGGCAGAAAGCAGCTGAAATGAAGATCCAATCTGCAATTGGGTTTCGTCATGTTATCGATCTCCTTTCATTGGAAAAGAAGTTAATTATCGGTCATAATTGCTTCCTTGATATTGCTCACATACACAGCAAATTTATAGGTTCTCTTCCTTCAACTGCTGAAGAATTTGTCTCTTCTATTGGAAAACACTTTCCATACATCATGGACACCAAAATTCTATTAAATGGCAATATCATTCTTCAGCAACGGATGAAGAAGTCTAGCACATCTCTATCCTCTGCATTTGGCTTATTATGCCCACATATTGCTTTTAGCCCTGCCTTCAACTCTGGTGTGCAAGTGGAGGTTCAAGTAGATGATTTAAGATCCTCCAACTGGAATTCTGGAGATAAGCATGAAGCTGGGTACGATGCTTTTATGACAGGATGTGTATTTGCTCAAGCCTGTAATCTAATTGGAATCGATTTCGTACTTCGTTCACCTTCTGAAAATTTAGCTGACAATGAAAAATTGCAGAAGCATGTAAACCATTTGTATTTGAGTTGGGCCAGTGGAGATATTATCGATCTGAGCACCGGTAATAGAATGACCGAGTCTTTGAGGTCTAACAGATCTAAAAAGCATCAAGCGAAAATATCGTTCGAGAACATTGTTTTAATATGGGGATTTCCCGCAAACCTCAATGCAAGGAAGATCAAAGAGAGCATCTCTAAAGTCTTTGGCGTGTCCAATGTCATTAGCGTCTACCATTTGGATGAAAGTGCTGTGTTTGTGCAGTTCGCAAAGCCAGAAATGGTTTCTGAATTTCTTGACCTAAAGGAAAACTTGGAGAGGCATGATAATCCGATATCAGTTTTGCATCCTCTCGCTGAACTTTTTGGAGCTAGAAATACTCATGCTGCAGGCTATGAAGCATACATGAAAATTTGCAGCTCGCCCATTTCTAAACTCTTGTTTTCTGATCAGGCTGAGGCAGTTGGGGTTAATCGAAAGACGAAGTCGACAAAATTTGAGGCAGTAAAGAGCCAAATGCATGAAGCTGCGCACAGATTAACTGTTGATATGTTAGATGAAAACACTGAAATACAGGCGACTGAGATCGGGGCAAATGATATTAGCAGCACTAACTACAGTATTTTACGGTCTTCTTCAATGTAA

Protein sequence

MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNSFIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDAARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQQLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLLCPHIAFSPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKSTKFEAVKSQMHEAAHRLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM

Homology

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BLAST of Lcy11g015770 vs. ExPASy Swiss-Prot
Match: Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)

HSP 1 Score: 745.7 bits (1924), Expect = 4.7e-214
Identity = 376/653 (57.58%), Postives = 472/653 (72.28%), Query Frame = 0


Query: 8   WALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVRAADFVAI 67
           W L  L+C   ++A  +V  +  A+A+ + FPLK+VT+ NFE  L++LRS V+AADFVAI
Sbjct: 7   WPLRSLVCSFSSSAAETVTTSTAASAT-AAFPLKHVTRSNFETTLNDLRSLVKAADFVAI 66

Query: 68  DLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNSFIAHPHN 127
           DLEMTG+TSAPWR+S EFDR+DVRYLKVKDSAEKFAV+QFGVCPFRWDS   SF+++PHN
Sbjct: 67  DLEMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHN 126

Query: 128 FFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDAARKSLDF 187
           FFVFPR+E+  D  + EFLCQTTS++FLAKYQFDFN CI+EGISYLSR  E+ A K L  
Sbjct: 127 FFVFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKM 186

Query: 188 AYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQECSNN 247
            +G++  D S     +   K + +ADVLF  RM+  L+EWR  LL   N   +    SN 
Sbjct: 187 LHGEDGIDSSGETEEL---KLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNG 246

Query: 248 YQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQQLVVYVD 307
             +  ET+F  MRPALSL  FTSHQ R++  V++KHF DL ++  +   +  + +VVY D
Sbjct: 247 SNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTD 306

Query: 308 SRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDIAHIHSKF 367
           S  D+E LMKE   +R++ AE KIQSAIGFR VIDLL+ EKKLI+GHNCFLDIAH++SKF
Sbjct: 307 SDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKF 366

Query: 368 IGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLLCPHIAFS 427
           +G LPSTAE+FV+SI  HFPYI+DTKILLN N +L QRMKKSSTSLSSAF  LCP I FS
Sbjct: 367 VGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFS 426

Query: 428 PAFNSG-----VQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVLRS 487
              +       V ++V++D++R SNWN+G KHEAGYDAFMTGC+FAQACN +G DF   S
Sbjct: 427 SRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHS 486

Query: 488 PSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLI 547
             ++ A NEKL+K++N LYLSW  GDIIDL TG+       SN      +K  +ENIVLI
Sbjct: 487 QLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGH-------SNADNWRVSKFKYENIVLI 546

Query: 548 WGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKENLERHD 607
           W FP  L AR IKE I K FG ++V SVYH+D+SAVFV F   E+V +FL LK  LE  D
Sbjct: 547 WNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSD 606

Query: 608 NPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTK 656
            P+SVLHPL+++    NT AA YEAY +ICSS +S+++FSDQAE VGV  +T+
Sbjct: 607 GPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAETVGVKSRTR 648

[Close]

BLAST of Lcy11g015770 vs. ExPASy Swiss-Prot
Match: Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.7e-57
Identity = 172/615 (27.97%), Postives = 287/615 (46.67%), Query Frame = 0


Query: 23  SSVAVNA--PATASNSTFPLKNVTKKNFEAALSELRSHVRAADFVAIDLEMTGITSAPWR 82
           SS++  A    T +   + +K V K NF   L E+R+ + ++DF+A+ L+ TG  +A W 
Sbjct: 7   SSISATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWH 66

Query: 83  ESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNSFIAHPHNFFVFPRREIQVDG 142
                D     YLK K +AE++ +LQF +CPF    +K     HP+NF +FPR E++   
Sbjct: 67  RVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCGM 126

Query: 143 TSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDAAR-KSLDFAYGDEMSDKSSN 202
            S  F CQ + +  +A+  FDFN CIYEGISYLSRA E A++  S +    D ++  SS 
Sbjct: 127 PSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVTVSSSP 186

Query: 203 VTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQECSNNYQRKFETIFFKM 262
            T         +AD +F  R+++R+  WR   +   +        S+  +    +  +  
Sbjct: 187 AT---------VADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGS 246

Query: 263 RPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQQL-VVYVDSRDDEELLMKE 322
           R  L++   +  Q +LI  ++ +  +D+  ++V       Q +  V++ S++D++L  +E
Sbjct: 247 RLCLTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRE 306

Query: 323 VNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEF 382
           +  D +K    +++   GFR V+D +S  +K ++  N   D   IH+KF+G LPS  ++F
Sbjct: 307 L-KDLEKEENRRVR---GFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDF 366

Query: 383 VSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLLCPHIAFSPAFNSGVQVEV 442
            SS+   FP ++D          L Q MK+ S  LS+   L     + +  F + V VEV
Sbjct: 367 SSSLSSAFPNVVD----------LSQFMKEIS-PLSNISNLPAAMSSLN-RFFAPVDVEV 426

Query: 443 QVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVLRSPSENLADNEKLQKHVN 502
                          H  G +A M   +FA+ C       + +S    +  NE  Q    
Sbjct: 427 ANQGCPVKLDEGHQSH--GQNAVMISQLFAKLCT------IQKSDLSTIQSNEDFQ---- 486

Query: 503 HLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPANLNARKIKESI 562
               S    + +   + N   E+++     K+  ++S EN+V IWG    + A K+K  +
Sbjct: 487 -ALASDEHANSVTSCSKNAGDENVKV--WSKNSRRVSSENLVFIWGLGKKMTAAKLKNVL 546

Query: 563 SKVFGV-SNVISVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDNPISVLHPLAELFGA 622
            K   V +    V ++D S+  + F +      FL    N E+ D  +  +        A
Sbjct: 547 QKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSLREM-------VA 572

Query: 623 RNTHAAGYEAYMKIC 633
                AGYE Y + C
Sbjct: 607 EGLRGAGYETYKRAC 572

[Close]

BLAST of Lcy11g015770 vs. ExPASy Swiss-Prot
Match: Q7ZU92 (Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-40
Identity = 126/464 (27.16%), Postives = 211/464 (45.47%), Query Frame = 0


Query: 43  VTKKNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRESFE--FDRFDVRYLKVKDSAE 102
           VT++NF+  L E+ + V+ ADF++ID E TGI+  P   +     D  + RY K++  + 
Sbjct: 3   VTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKHSM 62

Query: 103 KFAVLQFGVCPFRWDSAKNSFIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQF 162
            F + QFGVC FR+D  ++++I    NF++FP +         +F+CQ++SI+FLA   F
Sbjct: 63  NFLLFQFGVCTFRYDQNQSTYITKAFNFYIFP-KPFSRTSPDIKFICQSSSIDFLASQGF 122

Query: 163 DFNACIYEGISYLSRAHEDAARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERM 222
           DFN     GI YL++  E   R+  +   G       +   +       G+ +V   +R 
Sbjct: 123 DFNKVFRSGIPYLNQEEECQLREQYEERRGQM---NGAGPVSYTPPSGTGVCNVPEDQR- 182

Query: 223 KNRLHEWRDRLLSERNMEFQGQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVI 282
                                 E   + + K E +       L L   T  Q +LI   +
Sbjct: 183 ----------------------EFIRSVEEKVEALLKNTDQTLDLEPCTGFQRKLIYQTL 242

Query: 283 KKHFEDLCFVVVDGGDADLQQLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHV 342
              +     + V+  + + ++  + +   DDEE   +E    +Q+  + ++  A+GF  V
Sbjct: 243 NSKYSK--GLHVEALETEKKERFIQISKVDDEERRRRE--QQKQQREQEELNDAVGFSRV 302

Query: 343 IDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNI 402
           I  +S   KL++GHN  LD+ H   +F G LP   ++F       FP ++DTK++ +   
Sbjct: 303 IRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMAS--- 362

Query: 403 ILQQRMKK--SSTSLSSAFGLLCPHIAFSPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGY 462
              Q  K+   +TSL+     L       P            + L+S + ++   HEAGY
Sbjct: 363 --TQPFKEIIHNTSLAELHKQLRQKPFRPPTTEC-------PEGLQSYDTSTEQLHEAGY 422

Query: 463 DAFMTGCVFAQACNLIGIDFVLRSPSENLADNEKLQKHVNHLYL 503
           DAF+TG  F    N +G  F+    S   A ++ L+   N L+L
Sbjct: 423 DAFITGLCFISMANYLG-SFLTPPKSHISARSKLLEPFYNKLFL 422

[Close]

BLAST of Lcy11g015770 vs. ExPASy Swiss-Prot
Match: Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.2e-37
Identity = 119/463 (25.70%), Postives = 206/463 (44.49%), Query Frame = 0


Query: 43  VTKKNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRESFE--FDRFDVRYLKVKDSAE 102
           +T+ NF+  L ++   +  ADF+AID E +GI+  P   +    FD  + RY K+K  + 
Sbjct: 3   ITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHSM 62

Query: 103 KFAVLQFGVCPFRWDSAKNSFIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQF 162
           +F + QFG+C F +D+ +  ++    NF++FP +    +    +F+CQ++SI+FLA   F
Sbjct: 63  EFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFP-KPFNRNSPDKKFVCQSSSIDFLANQGF 122

Query: 163 DFNACIYEGISYLSRAHEDAARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERM 222
           DFN     GI YL++  E   R      Y D  S  +   T            V   +  
Sbjct: 123 DFNKVFRNGIPYLNQEEERVLRDQ----YEDRRSQSNGASTMSYISPNSSKTPVSIPDEQ 182

Query: 223 KNRLHEWRDRLLSERNMEFQGQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVI 282
           K  + +     + ER  +F   E                + ++++   T +Q +LI   +
Sbjct: 183 KGFIDK-----VVERVEDFLKNE----------------QKSMNVEPCTGYQRKLIYQTL 242

Query: 283 KKHFEDLCFVVVDGGDADLQQLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHV 342
              +     + V+  +++ ++  + +   D+EE   K +   +Q     ++  A+GF  +
Sbjct: 243 NWKYPR--GIHVETVESEKKERYIVISKVDEEE--RKRMEQQKQAKEREELDDAVGFSRI 302

Query: 343 IDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNI 402
           I  +S   KL++GHN  LD+ H   +F   LP    EF       FP ++DTK++ + N 
Sbjct: 303 IQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNP 362

Query: 403 ILQQRMKKSSTSLSSAFGLLCPHIAFSPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDA 462
             +     S   L            F P      +V+   +  +S N  S   HEAGYDA
Sbjct: 363 FKEIIYNTSLAELEKRL----KEAPFKPP-----KVD-SAEGFQSYNTASEQLHEAGYDA 422

Query: 463 FMTGCVFAQACNLIGIDFVLRSPSENLADNEKL-QKHVNHLYL 503
           ++TG  F    N +G    L  P + ++   K+ +   N L+L
Sbjct: 423 YITGLCFISMANYLG--SFLSPPKDYVSCRSKIVRPFFNKLFL 423

[Close]

BLAST of Lcy11g015770 vs. ExPASy Swiss-Prot
Match: P69341 (Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-35
Identity = 129/467 (27.62%), Postives = 213/467 (45.61%), Query Frame = 0


Query: 43  VTKKNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRESFE--FDRFDVRYLKVKDSAE 102
           + + NF++ L ++   +  ADF AID E +GI+  P   +    FD  + RY K+K  + 
Sbjct: 3   IIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHSM 62

Query: 103 KFAVLQFGVCPFRWDSAKNSFIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQF 162
            F + QFG+C F++D   + +I    NF+VFP +         +F+CQ++SI+FLA   F
Sbjct: 63  DFLLFQFGLCTFKYDYTDSKYITKSFNFYVFP-KPFNRSSPDVKFVCQSSSIDFLASQGF 122

Query: 163 DFNACIYEGISYLSRAHEDAARKSLDFAYGDEMSDKSSNVTNIRDKK-RIGIADVLFKER 222
           DFN     GI YL++  E   R+  D          + + T+    K  + I D   K+ 
Sbjct: 123 DFNKVFRNGIPYLNQEEERQLREQYDEKRSQSNGAGALSYTSPNTSKCPVTIPDDQ-KKF 182

Query: 223 MKNRLHEWRDRLLSERNMEFQGQECSNNYQRK--FETIFFKMRPALSLSDFTSHQTRLIQ 282
           +   + +  D L SE N     + C+  +QRK  ++T+ +K    +              
Sbjct: 183 IDQVVEKIEDLLQSEENKNLDLEPCT-GFQRKLIYQTLSWKYPKGI-------------- 242

Query: 283 LVIKKHFEDLCFVVVDGGDADLQQLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGF 342
                H E L        + + ++  + +   D+EE   +E     ++  E  +  A+GF
Sbjct: 243 -----HVETL--------ETEKKERYIVISKVDEEERKRREQQKHAKEQEE--LNDAVGF 302

Query: 343 RHVIDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLN 402
             VI  ++   KL+IGHN  LD+ H   +F   LP+   EF       FP ++DTK++ +
Sbjct: 303 SRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAS 362

Query: 403 GNIILQQRMKK--SSTSLSSAFGLLCPHIAFSPAFNSGVQVEVQVDDLRSSNWNSGDKHE 462
                 Q  K   ++TSL+     L     F+P      +VE   +   S +  S   HE
Sbjct: 363 -----TQPFKDIINNTSLAELEKRL-KETPFNPP-----KVE-SAEGFPSYDTASEQLHE 422

Query: 463 AGYDAFMTGCVFAQACNLIGIDFVLRSPSENLADNEKLQKHVNHLYL 503
           AGYDA++TG  F    N +G  F+    S   A ++ ++   N L+L
Sbjct: 423 AGYDAYITGLCFISMANYLG-SFLSPPKSHVSARSKLIEPFFNKLFL 424

[Close]

BLAST of Lcy11g015770 vs. ExPASy TrEMBL
Match: A0A6J1EWU6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438751 PE=3 SV=1)

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 625/712 (87.78%), Postives = 666/712 (93.54%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCFIRTA YSS AV  PATASNS+FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EI VDG SSEFLCQTTSIEFLAKYQFDFNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE SD SSNVTNIRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE SN+YQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCFVVVD GDA+LQ
Sbjct: 241 GQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVNSDRQ+AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKILLNGN ILQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAF+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLK+
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKK 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
           NLERHD+PISVLHPL ELFGA+ T+AAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 NLERHDDPISVLHPLTELFGAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTS 660

Query: 661 TKFEAVKSQMHEAAHR-LTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K E+VKSQMHEAA+  LT DML+E TE+Q  E+GAND+ +TNY ILRSSSM
Sbjct: 661 IKPESVKSQMHEAANNSLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710

[Close]

BLAST of Lcy11g015770 vs. ExPASy TrEMBL
Match: A0A6J1L1G4 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500250 PE=3 SV=1)

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 619/712 (86.94%), Postives = 661/712 (92.84%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCFIRTA YSS AV APATASNS+FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EIQVDG SSEFLCQTTSIEFLAKYQFDFNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE  D SSNVTNIR++KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETLDASSNVTNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE +N+YQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCFVVVD G+A+LQ
Sbjct: 241 GQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGNANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVN DRQ+AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNCDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLP TAEEFVSSIGK FP IMDTKILLNGN ILQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPLTAEEFVSSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAFNSGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFNSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNRMTE LRSNRSK+HQ KISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLKE
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKE 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
           NLERHD+PISVLHPL ELFGA++THAAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 NLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTMS 660

Query: 661 TKFEAVKSQMHEAAH-RLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K ++VK QMHEAA+  LT DML E TE+Q  E+GAND+ +TNY ILRSSSM
Sbjct: 661 IKLKSVKGQMHEAANSSLTADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710

[Close]

BLAST of Lcy11g015770 vs. ExPASy TrEMBL
Match: A0A6J1CSK6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013834 PE=3 SV=1)

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 617/713 (86.54%), Postives = 652/713 (91.44%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           M TPRPLWAL RLLCFIRTA YSS AV APATA N +FPLKNVTK NFEA ++ELR+HVR
Sbjct: 1   MKTPRPLWALPRLLCFIRTATYSSAAVTAPATAVNPSFPLKNVTKSNFEAVVAELRNHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDS KNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSTKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           FIAHPHNFFVFPR+EIQVDG S EFLCQTTS+EFLAKYQFDFNACI+EGISYLSRA E A
Sbjct: 121 FIAHPHNFFVFPRQEIQVDGPSPEFLCQTTSVEFLAKYQFDFNACIHEGISYLSRAQEYA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK LDFAYGDEMSD SSNVT+I+D+KR+ I+DVLFKERMKNRLHEWRDRLLSERN+EFQ
Sbjct: 181 ARKRLDFAYGDEMSDASSNVTDIKDEKRVSISDVLFKERMKNRLHEWRDRLLSERNVEFQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQECS  YQR F+TIFFKMRPAL L+DFTSHQTRLIQLVIKKHF DLC+V VD G+A+LQ
Sbjct: 241 GQECS--YQRPFQTIFFKMRPALCLNDFTSHQTRLIQLVIKKHFTDLCYVHVDNGNANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVD RDD+ELLMKEVNS+RQKAAEMKIQSAIGFRHVIDLLSLEKKLI+GHNCFLDI
Sbjct: 301 QLVVYVDYRDDKELLMKEVNSERQKAAEMKIQSAIGFRHVIDLLSLEKKLIVGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGN ILQQRMKKSSTSLSSA G+L
Sbjct: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNSILQQRMKKSSTSLSSALGVL 420

Query: 421 CPHIAF------SPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLI 480
           CPHIAF      SPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLI
Sbjct: 421 CPHIAFSSHSKSSPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLI 480

Query: 481 GIDFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKI 540
           GIDFV  SPSE LADNEK Q HVNHLYLSW SGDIIDLSTGNR TESLRSNRSKKHQAKI
Sbjct: 481 GIDFVRSSPSETLADNEKFQNHVNHLYLSWXSGDIIDLSTGNRRTESLRSNRSKKHQAKI 540

Query: 541 SFENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDL 600
           SFENIVLIWGFP N+NARKIK+ ISKVFG +NV+SVYHLDESAVFVQFAK EMVSEFL L
Sbjct: 541 SFENIVLIWGFPTNINARKIKQCISKVFGPTNVVSVYHLDESAVFVQFAKLEMVSEFLML 600

Query: 601 KENLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKT 660
           KENLERH++P+SVLHPL ELF ARNTHAA YEAY +ICSSPI KLLF+DQAEAVG NRKT
Sbjct: 601 KENLERHNDPVSVLHPLYELFEARNTHAACYEAYKEICSSPICKLLFADQAEAVGFNRKT 660

Query: 661 KSTKFEAVKSQMHEAAHRLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
           KS K E VKSQMHEAA+ LT DMLD NTEIQ TEIGANDIS TNY++L  SSM
Sbjct: 661 KSIKPETVKSQMHEAANGLTADMLDGNTEIQETEIGANDISCTNYNVLNLSSM 711

[Close]

BLAST of Lcy11g015770 vs. ExPASy TrEMBL
Match: A0A5D3CQS8 (Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00310 PE=3 SV=1)

HSP 1 Score: 1122.1 bits (2901), Expect = 0.0e+00
Identity = 569/711 (80.03%), Postives = 625/711 (87.90%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           M+   PLWA  RL CFIRT  YSS AV APATASNS+FPLKNVTK NFEAALSELRSHVR
Sbjct: 1   MHPSHPLWA-RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVA+DLEMTGITSAPWR+  EFDRFDVRYL VKDSAEKFAV+QFGVCPFRWDSAK S
Sbjct: 61  AADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKKS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFF+FPR EI+VDG SSEFLC+TTS+EFLAKYQFDFNACIYEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FAYGDEM D SSNVTN+RDKKR+GIADVLF+ERMKNRLHEWRDRLLSERNMEFQ
Sbjct: 181 ARKRLNFAYGDEMLDASSNVTNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEFQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE SN+++R+F+TIFFK RPAL+LSDFTSHQ +LIQLVIKKHFEDLCFVVV+ G+ADLQ
Sbjct: 241 GQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVN D+ KAAE KIQSAIGFRHVIDLLS EKKLI+GHNCFLD+
Sbjct: 301 QLVVYVDSRDDKELLMQEVNRDQNKAAETKIQSAIGFRHVIDLLSSEKKLIVGHNCFLDM 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
            HIH KFIGSLPSTAEEFVSS GKHFPY+MDTKILLN N IL++RM KS+TSLSSAFG L
Sbjct: 361 LHIHRKFIGSLPSTAEEFVSSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGSL 420

Query: 421 CPHIAFSP----AFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS     A N GVQVEVQVDDLRSS WNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSLRVNALNDGVQVEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFV  S S+NL DNE LQKH+N LYL+WASGDIIDLSTGN++TES    +++KH+ ++SF
Sbjct: 481 DFVDCSTSKNLVDNEILQKHINRLYLNWASGDIIDLSTGNQVTESF---KTRKHRVRVSF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGF  NL ARKIK  ISKVFG +NV SV HLDESAVFVQF KPEMVSEFL+LKE
Sbjct: 541 ENIVLIWGFSTNLTARKIKACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLKE 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
            LE+ D+PISVLHPL ELF AR THAAGYEAY KICSSP+SKLLFSDQAEAVG+NRKT  
Sbjct: 601 KLEKRDDPISVLHPLTELFDARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTML 660

Query: 661 TKFEAVKSQMHEAAHRLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K EA +S++ +A     VDMLDE TEIQ TE  AN++SSTNY  LRSSSM
Sbjct: 661 IKSEAKRSKIDQA-----VDMLDETTEIQGTEGEANNLSSTNYQSLRSSSM 702

[Close]

BLAST of Lcy11g015770 vs. ExPASy TrEMBL
Match: A0A0A0L4V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1)

HSP 1 Score: 1121.7 bits (2900), Expect = 0.0e+00
Identity = 568/712 (79.78%), Postives = 622/712 (87.36%), Query Frame = 0


Query: 1   MNTPRPLWAL-TRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHV 60
           MN   PLWAL  RL CFIRT  YSS AV AP+TASNS+FPLKNVTK NFEAALSELRSHV
Sbjct: 1   MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60

Query: 61  RAADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKN 120
           RAADFVAIDLEMTGITSAPWR+  EFDRFDVRYL VKDSAEKFAVLQFG+CPFRWDSAKN
Sbjct: 61  RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120

Query: 121 SFIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHED 180
           SF+AHPHNFF+FPR EI+VDG SSEFLCQTTS+EFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180

Query: 181 AARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEF 240
           AARK L+FAYGDEM D SSNVTN+ DKKR+GI DVLFKERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240

Query: 241 QGQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADL 300
           QGQE SN+++R+F+TIFFKMRPAL+LSDFTSHQ +LIQLVIKKHFEDLCFVVV+ G+ADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300

Query: 301 QQLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLD 360
           QQLVV+VDSRDD+ELLM+EVN D+++  EMKIQSAIGFRHVIDLLS EKKLI+GHNCFLD
Sbjct: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360

Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGL 420
           + HIH KFIGSLPST EEFVSS+GKHFPYIMDTKILLNGN IL +RM KS+TSLSSAFGL
Sbjct: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420

Query: 421 LCPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIG 480
           LCPHIAFS     A+NSGVQVEVQVDDLRSS WNSGD HEAGYDAFMTGCVFAQAC+L+G
Sbjct: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480

Query: 481 IDFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKIS 540
           IDFV RS SENL  NE LQKH+N LYLSWA GDIIDLSTGN++TES     ++KH+AK+S
Sbjct: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESF---TTRKHRAKVS 540

Query: 541 FENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLK 600
           F+NIVLIWGFP NL ARKIK  ISK FG +NV SV HLDESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLK 600

Query: 601 ENLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTK 660
           E LE+ D+P+SVLHPL ELF  R THAAGYEAY KICSSP+SK LFSDQAEAVG+NRKT 
Sbjct: 601 EKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTT 660

Query: 661 STKFEAVKSQMHEAAHRLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
           S K E  +S+MH+A          E TEIQ TE+ AND+S+TNY  LRSSSM
Sbjct: 661 SIKSEEKRSRMHQAV---------ETTEIQGTEVEANDLSNTNYHSLRSSSM 700

[Close]

BLAST of Lcy11g015770 vs. NCBI nr
Match: KAG7015576.1 (Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 627/712 (88.06%), Postives = 668/712 (93.82%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCFIRTA YSS AV APATASNS FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EIQVDG SSEFLCQTTSIEFLAKYQFDFNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE SD SSNVTNIRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE SNNYQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCFVVVD GDA+LQ
Sbjct: 241 GQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVNSDRQ+AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKILLNGN +LQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAF+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLK+
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKK 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
           NLERHD+PISVLHPL ELFGA++THAAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 NLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTS 660

Query: 661 TKFEAVKSQMHEAAH-RLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K E+VKSQMHEAA+  LT DML+E TE+Q  E+GAND+ +TNY IL+SSSM
Sbjct: 661 IKPESVKSQMHEAANSSLTADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710

[Close]

BLAST of Lcy11g015770 vs. NCBI nr
Match: XP_022932379.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita moschata])

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 625/712 (87.78%), Postives = 666/712 (93.54%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCFIRTA YSS AV  PATASNS+FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EI VDG SSEFLCQTTSIEFLAKYQFDFNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE SD SSNVTNIRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE SN+YQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCFVVVD GDA+LQ
Sbjct: 241 GQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVNSDRQ+AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKILLNGN ILQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAF+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLK+
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKK 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
           NLERHD+PISVLHPL ELFGA+ T+AAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 NLERHDDPISVLHPLTELFGAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTS 660

Query: 661 TKFEAVKSQMHEAAHR-LTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K E+VKSQMHEAA+  LT DML+E TE+Q  E+GAND+ +TNY ILRSSSM
Sbjct: 661 IKPESVKSQMHEAANNSLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710

[Close]

BLAST of Lcy11g015770 vs. NCBI nr
Match: KAG6577517.1 (Poly(A)-specific ribonuclease PARN, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 624/712 (87.64%), Postives = 666/712 (93.54%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCFIRTA YSS AV APATASNS FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EIQVDG SSEFLCQTTSIEFLAKYQFDFN CI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNFCIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE SD SSNVTNIRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE SNNYQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCF+VVD GDA+LQ
Sbjct: 241 GQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFIVVDDGDANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVNSDRQ+AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKILLNGN +LQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAF+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLK+
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKK 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
            LERHD+PISVLHPL ELFGA++THAAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 ILERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTS 660

Query: 661 TKFEAVKSQMHEAAH-RLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K E+VKSQMHEAA+  LT DML+E TE+Q  E+GAND+ +TNY IL+SSSM
Sbjct: 661 IKPESVKSQMHEAANSSLTADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710

[Close]

BLAST of Lcy11g015770 vs. NCBI nr
Match: XP_023553318.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1234.2 bits (3192), Expect = 0.0e+00
Identity = 622/712 (87.36%), Postives = 666/712 (93.54%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCF RTA YSS AV++PATASNS+FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFTRTATYSSAAVSSPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EIQVDG SSEFLCQTTSIEFLAKYQFDFNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE  D SSNVTNIRD KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETLDASSNVTNIRDPKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE SN+YQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCFVVVD GDA+LQ
Sbjct: 241 GQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVNSD+++AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNSDQREAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKILLNGN ILQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAF+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNR TE LRSNRSKKHQAKISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRTTEPLRSNRSKKHQAKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLK+
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKK 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
           NLERHD+PISVLHPL ELFGA++THAAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 NLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTS 660

Query: 661 TKFEAVKSQMHEAA-HRLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K E+VKSQMHEAA + LT DML+E TE+Q  E+GAND+ +TNY ILRSSSM
Sbjct: 661 IKPESVKSQMHEAANNNLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710

[Close]

BLAST of Lcy11g015770 vs. NCBI nr
Match: XP_023007721.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita maxima])

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 619/712 (86.94%), Postives = 661/712 (92.84%), Query Frame = 0


Query: 1   MNTPRPLWALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVR 60
           MN  RPLWA TRLLCFIRTA YSS AV APATASNS+FPLKNVTK NFEA LSELRSHVR
Sbjct: 1   MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60

Query: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNS 120
           AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAV+QFGVCPFRWDSAKNS
Sbjct: 61  AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120

Query: 121 FIAHPHNFFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDA 180
           F+AHPHNFFVFPR EIQVDG SSEFLCQTTSIEFLAKYQFDFNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180

Query: 181 ARKSLDFAYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
           ARK L+FA+GDE  D SSNVTNIR++KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETLDASSNVTNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240

Query: 241 GQECSNNYQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQ 300
           GQE +N+YQR+FETIFFKMRPAL+LSDFTSHQT+LIQLVIKKHFEDLCFVVVD G+A+LQ
Sbjct: 241 GQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGNANLQ 300

Query: 301 QLVVYVDSRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDI 360
           QLVVYVDSRDD+ELLM+EVN DRQ+AAEMKIQSAIGFRHVIDLLS EKKLIIGHNCFLDI
Sbjct: 301 QLVVYVDSRDDKELLMQEVNCDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDI 360

Query: 361 AHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLL 420
           AHIH KFIGSLP TAEEFVSSIGK FP IMDTKILLNGN ILQQRMKKSSTSLSSAF LL
Sbjct: 361 AHIHKKFIGSLPLTAEEFVSSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFALL 420

Query: 421 CPHIAFS----PAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGI 480
           CPHIAFS    PAFNSGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GI
Sbjct: 421 CPHIAFSSQSNPAFNSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGI 480

Query: 481 DFVLRSPSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISF 540
           DFVL  PSENLADNEKLQKH+NHLYLSWASGDIIDLSTGNRMTE LRSNRSK+HQ KISF
Sbjct: 481 DFVL--PSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKISF 540

Query: 541 ENIVLIWGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKE 600
           ENIVLIWGFPANLNARKIKE ISKVFG++N++SVYH+DESAVFVQFAKPEMVSEFLDLKE
Sbjct: 541 ENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKE 600

Query: 601 NLERHDNPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTKS 660
           NLERHD+PISVLHPL ELFGA++THAAGYEAY +ICSSP+ K+LF+DQAEAVG+N+KT S
Sbjct: 601 NLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTMS 660

Query: 661 TKFEAVKSQMHEAAH-RLTVDMLDENTEIQATEIGANDISSTNYSILRSSSM 708
            K ++VK QMHEAA+  LT DML E TE+Q  E+GAND+ +TNY ILRSSSM
Sbjct: 661 IKLKSVKGQMHEAANSSLTADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710

[Close]

BLAST of Lcy11g015770 vs. TAIR 10
Match: AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 745.7 bits (1924), Expect = 3.3e-215
Identity = 376/653 (57.58%), Postives = 472/653 (72.28%), Query Frame = 0


Query: 8   WALTRLLCFIRTAAYSSVAVNAPATASNSTFPLKNVTKKNFEAALSELRSHVRAADFVAI 67
           W L  L+C   ++A  +V  +  A+A+ + FPLK+VT+ NFE  L++LRS V+AADFVAI
Sbjct: 7   WPLRSLVCSFSSSAAETVTTSTAASAT-AAFPLKHVTRSNFETTLNDLRSLVKAADFVAI 66

Query: 68  DLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNSFIAHPHN 127
           DLEMTG+TSAPWR+S EFDR+DVRYLKVKDSAEKFAV+QFGVCPFRWDS   SF+++PHN
Sbjct: 67  DLEMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHN 126

Query: 128 FFVFPRREIQVDGTSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDAARKSLDF 187
           FFVFPR+E+  D  + EFLCQTTS++FLAKYQFDFN CI+EGISYLSR  E+ A K L  
Sbjct: 127 FFVFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKM 186

Query: 188 AYGDEMSDKSSNVTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQECSNN 247
            +G++  D S     +   K + +ADVLF  RM+  L+EWR  LL   N   +    SN 
Sbjct: 187 LHGEDGIDSSGETEEL---KLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNG 246

Query: 248 YQRKFETIFFKMRPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQQLVVYVD 307
             +  ET+F  MRPALSL  FTSHQ R++  V++KHF DL ++  +   +  + +VVY D
Sbjct: 247 SNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTD 306

Query: 308 SRDDEELLMKEVNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDIAHIHSKF 367
           S  D+E LMKE   +R++ AE KIQSAIGFR VIDLL+ EKKLI+GHNCFLDIAH++SKF
Sbjct: 307 SDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKF 366

Query: 368 IGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLLCPHIAFS 427
           +G LPSTAE+FV+SI  HFPYI+DTKILLN N +L QRMKKSSTSLSSAF  LCP I FS
Sbjct: 367 VGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFS 426

Query: 428 PAFNSG-----VQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVLRS 487
              +       V ++V++D++R SNWN+G KHEAGYDAFMTGC+FAQACN +G DF   S
Sbjct: 427 SRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHS 486

Query: 488 PSENLADNEKLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLI 547
             ++ A NEKL+K++N LYLSW  GDIIDL TG+       SN      +K  +ENIVLI
Sbjct: 487 QLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGH-------SNADNWRVSKFKYENIVLI 546

Query: 548 WGFPANLNARKIKESISKVFGVSNVISVYHLDESAVFVQFAKPEMVSEFLDLKENLERHD 607
           W FP  L AR IKE I K FG ++V SVYH+D+SAVFV F   E+V +FL LK  LE  D
Sbjct: 547 WNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSD 606

Query: 608 NPISVLHPLAELFGARNTHAAGYEAYMKICSSPISKLLFSDQAEAVGVNRKTK 656
            P+SVLHPL+++    NT AA YEAY +ICSS +S+++FSDQAE VGV  +T+
Sbjct: 607 GPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAETVGVKSRTR 648

[Close]

BLAST of Lcy11g015770 vs. TAIR 10
Match: AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 550.1 bits (1416), Expect = 2.7e-156
Identity = 282/509 (55.40%), Postives = 355/509 (69.74%), Query Frame = 0


Query: 152 IEFLAKYQFDFNACIYEGISYLSRAHEDAARKSLDFAYGDEMSDKSSNVTNIRDKKRIGI 211
           ++FLAKYQFDFN CI+EGISYLSR  E+ A K L   +G++  D S     +   K + +
Sbjct: 1   MDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEEL---KLVRL 60

Query: 212 ADVLFKERMKNRLHEWRDRLLSERNMEFQGQECSNNYQRKFETIFFKMRPALSLSDFTSH 271
           ADVLF  RM+  L+EWR  LL   N   +    SN   +  ET+F  MRPALSL  FTSH
Sbjct: 61  ADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSH 120

Query: 272 QTRLIQLVIKKHFEDLCFVVVDGGDADLQQLVVYVDSRDDEELLMKEVNSDRQKAAEMKI 331
           Q R++  V++KHF DL ++  +   +  + +VVY DS  D+E LMKE   +R++ AE KI
Sbjct: 121 QLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKI 180

Query: 332 QSAIGFRHVIDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMD 391
           QSAIGFR VIDLL+ EKKLI+GHNCFLDIAH++SKF+G LPSTAE+FV+SI  HFPYI+D
Sbjct: 181 QSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVD 240

Query: 392 TKILLNGNIILQQRMKKSSTSLSSAFGLLCPHIAFSPAFNSG-----VQVEVQVDDLRSS 451
           TKILLN N +L QRMKKSSTSLSSAF  LCP I FS   +       V ++V++D++R S
Sbjct: 241 TKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCS 300

Query: 452 NWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVLRSPSENLADNEKLQKHVNHLYLSWAS 511
           NWN+G KHEAGYDAFMTGC+FAQACN +G DF   S  ++ A NEKL+K++N LYLSW  
Sbjct: 301 NWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTR 360

Query: 512 GDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPANLNARKIKESISKVFGVSN 571
           GDIIDL TG+       SN      +K  +ENIVLIW FP  L AR IKE I K FG ++
Sbjct: 361 GDIIDLRTGH-------SNADNWRVSKFKYENIVLIWNFPRKLKARGIKECICKAFGSAS 420

Query: 572 VISVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDNPISVLHPLAELFGARNTHAAGYE 631
           V SVYH+D+SAVFV F   E+V +FL LK  LE  D P+SVLHPL+++    NT AA YE
Sbjct: 421 VTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADYE 480

Query: 632 AYMKICSSPISKLLFSDQAEAVGVNRKTK 656
           AY +ICSS +S+++FSDQAE VGV  +T+
Sbjct: 481 AYKEICSSHVSEVMFSDQAETVGVKSRTR 499

[Close]

BLAST of Lcy11g015770 vs. TAIR 10
Match: AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 3.4e-58
Identity = 172/615 (27.97%), Postives = 287/615 (46.67%), Query Frame = 0


Query: 23  SSVAVNA--PATASNSTFPLKNVTKKNFEAALSELRSHVRAADFVAIDLEMTGITSAPWR 82
           SS++  A    T +   + +K V K NF   L E+R+ + ++DF+A+ L+ TG  +A W 
Sbjct: 7   SSISATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWH 66

Query: 83  ESFEFDRFDVRYLKVKDSAEKFAVLQFGVCPFRWDSAKNSFIAHPHNFFVFPRREIQVDG 142
                D     YLK K +AE++ +LQF +CPF    +K     HP+NF +FPR E++   
Sbjct: 67  RVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCGM 126

Query: 143 TSSEFLCQTTSIEFLAKYQFDFNACIYEGISYLSRAHEDAAR-KSLDFAYGDEMSDKSSN 202
            S  F CQ + +  +A+  FDFN CIYEGISYLSRA E A++  S +    D ++  SS 
Sbjct: 127 PSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVTVSSSP 186

Query: 203 VTNIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQECSNNYQRKFETIFFKM 262
            T         +AD +F  R+++R+  WR   +   +        S+  +    +  +  
Sbjct: 187 AT---------VADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGS 246

Query: 263 RPALSLSDFTSHQTRLIQLVIKKHFEDLCFVVVDGGDADLQQL-VVYVDSRDDEELLMKE 322
           R  L++   +  Q +LI  ++ +  +D+  ++V       Q +  V++ S++D++L  +E
Sbjct: 247 RLCLTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRE 306

Query: 323 VNSDRQKAAEMKIQSAIGFRHVIDLLSLEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEF 382
           +  D +K    +++   GFR V+D +S  +K ++  N   D   IH+KF+G LPS  ++F
Sbjct: 307 L-KDLEKEENRRVR---GFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDF 366

Query: 383 VSSIGKHFPYIMDTKILLNGNIILQQRMKKSSTSLSSAFGLLCPHIAFSPAFNSGVQVEV 442
            SS+   FP ++D          L Q MK+ S  LS+   L     + +  F + V VEV
Sbjct: 367 SSSLSSAFPNVVD----------LSQFMKEIS-PLSNISNLPAAMSSLN-RFFAPVDVEV 426

Query: 443 QVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVLRSPSENLADNEKLQKHVN 502
                          H  G +A M   +FA+ C       + +S    +  NE  Q    
Sbjct: 427 ANQGCPVKLDEGHQSH--GQNAVMISQLFAKLCT------IQKSDLSTIQSNEDFQ---- 486

Query: 503 HLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPANLNARKIKESI 562
               S    + +   + N   E+++     K+  ++S EN+V IWG    + A K+K  +
Sbjct: 487 -ALASDEHANSVTSCSKNAGDENVKV--WSKNSRRVSSENLVFIWGLGKKMTAAKLKNVL 546

Query: 563 SKVFGV-SNVISVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDNPISVLHPLAELFGA 622
            K   V +    V ++D S+  + F +      FL    N E+ D  +  +        A
Sbjct: 547 QKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSLREM-------VA 572

Query: 623 RNTHAAGYEAYMKIC 633
                AGYE Y + C
Sbjct: 607 EGLRGAGYETYKRAC 572

The following BLAST results are available for this feature:

BLAST of Lcy11g015770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LG26	4.7e-214	57.58	Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ...	[more]
Q8W4C3	4.7e-57	27.97	Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2...	[more]
Q7ZU92	1.4e-40	27.16	Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2	[more]
Q90ZA1	3.2e-37	25.70	Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1	[more]
P69341	2.3e-35	27.62	Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2	[more]

BLAST of Lcy11g015770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWU6	0.0e+00	87.78	poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1L1G4	0.0e+00	86.94	poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CSK6	0.0e+00	86.54	poly(A)-specific ribonuclease PARN isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3CQS8	0.0e+00	80.03	Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0L4V6	0.0e+00	79.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1	[more]

BLAST of Lcy11g015770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015576.1	0.0e+00	88.06	Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022932379.1	0.0e+00	87.78	poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita moschata]	[more]
KAG6577517.1	0.0e+00	87.64	Poly(A)-specific ribonuclease PARN, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023553318.1	0.0e+00	87.36	poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023007721.1	0.0e+00	86.94	poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita maxima]	[more]

BLAST of Lcy11g015770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55870.1	3.3e-215	57.58	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G55870.2	2.7e-156	55.40	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G25430.1	3.4e-58	27.97	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 217..237
None	No IPR available	PANTHER	PTHR15092	POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1	coord: 38..653
None	No IPR available	PANTHER	PTHR15092:SF22	POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1	coord: 38..653
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 297..516 e-value: 3.3E-45 score: 156.5 coord: 42..214 e-value: 2.5E-42 score: 147.1
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 43..467 e-value: 2.4E-86 score: 289.9
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 40..478

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g015770.1	Lcy11g015770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding