Lcy11g015580 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g015580
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	PSI-G
Location	Chr11: 36946763 .. 36947526 (+)
RNA-Seq Expression	Lcy11g015580
Synteny	Lcy11g015580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCCACTCCAAATCTCCCACACCACATTCCACACACAGCATTATCAGCCATGGCCGCCGCCTCCTCCTCCGCCCTCTTCGCCGCCCCAGCCTTCTCCGCCGCCGCCCAGAGGCAGCACCCAACCCCCTCCACCATATCATTCCAAGGCCTCCGCCCACTCCCGGCGGTCAAATCCAGTCGCAGCGTCGCCCCGGGCAGCAGCCGGAGATCCGCCGTGGTGAAGGCGGAGCTGAACCCATCCCTGGTGATAAGCCTGAGCACGGGGCTGTCTCTGTTCCTGGGGAGGTTCGTTTTCTTCAACTTCCAGAGGGAGAACGTGAGCAAGCAAGTGCCGGAGCAGAACGGGCTGACCCACTTCGAGGCCGGAGACGTGAGGGCTAAGGAGTATGTGAGCCTGTTGAAGTCTAATGACCCAGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTACATCTTGGCTACTTCTAGCAATGGCTATGATCCCAAGTTCTTTTAGTGTTTCTTCATGTCCTTTCTGGCTTTGTATAGGTAAATCAATCACTGCTTTCATTTTGTATCTTTAATTAATGGGGTTTTTGGTGGGCTTGTGACTTGCTGTGTATTATTATTGAATGGTTTTATTTGTGAAGCTGCTGCAATTTCAAACATCAATTTTGACTCTGTTATCAGTTTTGGCTTGACCTGGAACTAATTAGCATAGAAAGAGATCAATTTGTGCTTTAATTTGATGTCTTG

mRNA sequence

TTATCCACTCCAAATCTCCCACACCACATTCCACACACAGCATTATCAGCCATGGCCGCCGCCTCCTCCTCCGCCCTCTTCGCCGCCCCAGCCTTCTCCGCCGCCGCCCAGAGGCAGCACCCAACCCCCTCCACCATATCATTCCAAGGCCTCCGCCCACTCCCGGCGGTCAAATCCAGTCGCAGCGTCGCCCCGGGCAGCAGCCGGAGATCCGCCGTGGTGAAGGCGGAGCTGAACCCATCCCTGGTGATAAGCCTGAGCACGGGGCTGTCTCTGTTCCTGGGGAGGTTCGTTTTCTTCAACTTCCAGAGGGAGAACGTGAGCAAGCAAGTGCCGGAGCAGAACGGGCTGACCCACTTCGAGGCCGGAGACGTGAGGGCTAAGGAGTATGTGAGCCTGTTGAAGTCTAATGACCCAGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTACATCTTGGCTACTTCTAGCAATGGCTATGATCCCAAGTTCTTTTAGTGTTTCTTCATGTCCTTTCTGGCTTTGTATAGGTAAATCAATCACTGCTTTCATTTTGTATCTTTAATTAATGGGGTTTTTGGTGGGCTTGTGACTTGCTGTGTATTATTATTGAATGGTTTTATTTGTGAAGCTGCTGCAATTTCAAACATCAATTTTGACTCTGTTATCAGTTTTGGCTTGACCTGGAACTAATTAGCATAGAAAGAGATCAATTTGTGCTTTAATTTGATGTCTTG

Coding sequence (CDS)

ATGGCCGCCGCCTCCTCCTCCGCCCTCTTCGCCGCCCCAGCCTTCTCCGCCGCCGCCCAGAGGCAGCACCCAACCCCCTCCACCATATCATTCCAAGGCCTCCGCCCACTCCCGGCGGTCAAATCCAGTCGCAGCGTCGCCCCGGGCAGCAGCCGGAGATCCGCCGTGGTGAAGGCGGAGCTGAACCCATCCCTGGTGATAAGCCTGAGCACGGGGCTGTCTCTGTTCCTGGGGAGGTTCGTTTTCTTCAACTTCCAGAGGGAGAACGTGAGCAAGCAAGTGCCGGAGCAGAACGGGCTGACCCACTTCGAGGCCGGAGACGTGAGGGCTAAGGAGTATGTGAGCCTGTTGAAGTCTAATGACCCAGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTACATCTTGGCTACTTCTAGCAATGGCTATGATCCCAAGTTCTTTTAG

Protein sequence

MAAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Homology

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BLAST of Lcy11g015580 vs. ExPASy Swiss-Prot
Match: Q9S7N7 (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAG PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.8e-53
Identity = 116/160 (72.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 3   AASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSV----APGSSRRSAVVK 62
           A S+SAL +   FS A    H  P++ISF GLRPL    SS ++      G    SAVV+
Sbjct: 2   ATSASALLSPTTFSTAI--SHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 63  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLL 122
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQNG THFEAGD RAKEYVSLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 123 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

[Close]

BLAST of Lcy11g015580 vs. ExPASy Swiss-Prot
Match: P12357 (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAG PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.7e-52
Identity = 115/164 (70.12%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 2   AAASSSALFAAPAFS----AAAQRQHPTPSTISFQGLRPL----PAVKSSRSVAPGSSRR 61
           A AS S+   AP  S       Q QH      SF GLRPL     +  SS S++  S+RR
Sbjct: 4   ATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSARR 63

Query: 62  SAVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEY 121
           S   +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN++KQVPEQNG++HFEAGD RAKEY
Sbjct: 64  SMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKEY 123

Query: 122 VSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           VSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 124 VSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167

[Close]

BLAST of Lcy11g015580 vs. ExPASy Swiss-Prot
Match: Q00327 (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAG PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 100/156 (64.10%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 3   AASSSALFAAPAFSAAAQRQHPTP-STISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 62
           A S++A+ + PA   A  R  P+P +  SF+G+ P              +RRS   +A L
Sbjct: 2   ATSTAAVLSPPA--VAGLRLAPSPRAAASFRGVSP-------------PARRSVAARAAL 61

Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122
            PS+VISLSTGLSL +GRFVFFNFQRENV+KQVPEQNG THFEAGD RAKE+  +LKSND
Sbjct: 62  EPSVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSND 121

Query: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 122 PVGFNLVDVLAWGSIGHIVAYYILATTSNGYDPPFF 142

[Close]

BLAST of Lcy11g015580 vs. ExPASy Swiss-Prot
Match: Q9SPM4 (Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=38588 GN=PSAG PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSN 121
           N S +IS ST   L LGRFVF  FQR  VS+  +PEQNG+          + + S+LK+N
Sbjct: 17  NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTN 76

Query: 122 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 154
           DP GF +VDVLAWG++GH V ++ILAT++NGY+
Sbjct: 77  DPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109

[Close]

BLAST of Lcy11g015580 vs. ExPASy Swiss-Prot
Match: P14224 (Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAG PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 32  QGLRPLPAVKSSRSVAPGSSRRSAVV-KAELNPSLVISLSTGLSLFLGRFVFFNFQRENV 91
           Q L   P++++S  VAP  + R AVV KA L+P +VIS ST   L +GRFVF  +QR   
Sbjct: 2   QTLASRPSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREA 61

Query: 92  ---SKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT 150
              S   P+  G T+F+  D++     ++  +NDP GFNI+DV  WG++GH V + +LA 
Sbjct: 62  NFDSTVGPKTTGATYFD--DLQKNS--TIFATNDPAGFNIIDVAGWGALGHAVGFAVLAI 119

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BLAST of Lcy11g015580 vs. ExPASy TrEMBL
Match: A0A5D3CPR0 (PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MAAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAE 60
           MAAASSSA+F AP FSA A RQ P+P+TISFQGLR LP+VKSSRS+    +RRS  VKAE
Sbjct: 1   MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAE 60

Query: 61  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN 120
           LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN
Sbjct: 61  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN 120

Query: 121 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of Lcy11g015580 vs. ExPASy TrEMBL
Match: A0A1S3BKK6 (PSI-G OS=Cucumis melo OX=3656 GN=LOC103491045 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MAAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAE 60
           MAAASSSA+F AP FSA A RQ P+P+TISFQGLR LP+VKSSRS+    +RRS  VKAE
Sbjct: 1   MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAE 60

Query: 61  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN 120
           LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN
Sbjct: 61  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN 120

Query: 121 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of Lcy11g015580 vs. ExPASy TrEMBL
Match: A0A0A0L4W3 (PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.8e-68
Identity = 140/156 (89.74%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 2   AAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 61
           AAASSSA+FAAP FSA A RQ P P+TISFQGLR LP+VKSSRSV    SRRS  VKAEL
Sbjct: 3   AAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAEL 62

Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121
           NPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKSND
Sbjct: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122

Query: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. ExPASy TrEMBL
Match: A0A6J1L2L3 (PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.8e-67
Identity = 137/156 (87.82%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 2   AAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 61
           A ASSSA+FAA +FSAA +RQ P PSTIS+QGLRPLP +KSSRS+A   S RS VVKAEL
Sbjct: 3   AVASSSAVFAASSFSAAVRRQQPNPSTISYQGLRPLPGIKSSRSLAAVKSPRSLVVKAEL 62

Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121
           NPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEYVSLLKSND
Sbjct: 63  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSND 122

Query: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. ExPASy TrEMBL
Match: A0A6J1F1K2 (PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.9e-67
Identity = 137/156 (87.82%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 2   AAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 61
           AAASSSA+FAA +FSA+  RQ P PSTIS+QGLRPLP +KSSRS+A   S RS VVKAEL
Sbjct: 3   AAASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSPRSVVVKAEL 62

Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121
           NPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEYVSLLKSND
Sbjct: 63  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSND 122

Query: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. NCBI nr
Match: XP_008449063.1 (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo] >KAA0065757.1 photosystem I reaction center subunit V [Cucumis melo var. makuwa] >TYK13781.1 photosystem I reaction center subunit V [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 8.3e-68
Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MAAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAE 60
           MAAASSSA+F AP FSA A RQ P+P+TISFQGLR LP+VKSSRS+    +RRS  VKAE
Sbjct: 1   MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAE 60

Query: 61  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN 120
           LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN
Sbjct: 61  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSN 120

Query: 121 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of Lcy11g015580 vs. NCBI nr
Match: XP_004149569.1 (photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN56044.1 hypothetical protein Csa_010215 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 140/156 (89.74%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 2   AAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 61
           AAASSSA+FAAP FSA A RQ P P+TISFQGLR LP+VKSSRSV    SRRS  VKAEL
Sbjct: 3   AAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAEL 62

Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121
           NPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKSND
Sbjct: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122

Query: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. NCBI nr
Match: XP_038903014.1 (photosystem I reaction center subunit V, chloroplastic [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 139/155 (89.68%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 3   AASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAELN 62
           AASSSA+FAAP FSAAA RQ PTP+ +SFQGLR LP+VKSSR      SRRS VVKAELN
Sbjct: 4   AASSSAIFAAPTFSAAATRQQPTPTAVSFQGLRALPSVKSSRPGVAIKSRRSVVVKAELN 63

Query: 63  PSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDP 122
           PSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDP
Sbjct: 64  PSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDP 123

Query: 123 VGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           VGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 124 VGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. NCBI nr
Match: XP_023005588.1 (photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 137/156 (87.82%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 2   AAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 61
           A ASSSA+FAA +FSAA +RQ P PSTIS+QGLRPLP +KSSRS+A   S RS VVKAEL
Sbjct: 3   AVASSSAVFAASSFSAAVRRQQPNPSTISYQGLRPLPGIKSSRSLAAVKSPRSLVVKAEL 62

Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121
           NPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEYVSLLKSND
Sbjct: 63  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSND 122

Query: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. NCBI nr
Match: KAG6596752.1 (Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 137/156 (87.82%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 2   AAASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSVAPGSSRRSAVVKAEL 61
           AAASSSA+FAA +FS A  RQ P PSTIS+QGLRPLP +KSSRS+A   S+RS VVKAEL
Sbjct: 3   AAASSSAVFAASSFSTAVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSQRSVVVKAEL 62

Query: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121
           NPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEYVSLLKSND
Sbjct: 63  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSND 122

Query: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of Lcy11g015580 vs. TAIR 10
Match: AT1G55670.1 (photosystem I subunit G )

HSP 1 Score: 208.0 bits (528), Expect = 5.6e-54
Identity = 116/160 (72.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 3   AASSSALFAAPAFSAAAQRQHPTPSTISFQGLRPLPAVKSSRSV----APGSSRRSAVVK 62
           A S+SAL +   FS A    H  P++ISF GLRPL    SS ++      G    SAVV+
Sbjct: 2   ATSASALLSPTTFSTAI--SHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 63  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLL 122
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQNG THFEAGD RAKEYVSLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 123 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

The following BLAST results are available for this feature:

BLAST of Lcy11g015580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7N7	7.8e-53	72.50	Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana O...	[more]
P12357	1.7e-52	70.12	Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3...	[more]
Q00327	1.6e-45	64.10	Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=451...	[more]
Q9SPM4	1.5e-19	51.61	Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=...	[more]
P14224	1.3e-15	41.80	Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhard...	[more]

BLAST of Lcy11g015580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CPR0	4.0e-68	88.54	PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=...	[more]
A0A1S3BKK6	4.0e-68	88.54	PSI-G OS=Cucumis melo OX=3656 GN=LOC103491045 PE=3 SV=1	[more]
A0A0A0L4W3	6.8e-68	89.74	PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1	[more]
A0A6J1L2L3	5.8e-67	87.82	PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1	[more]
A0A6J1F1K2	9.9e-67	87.82	PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1	[more]

BLAST of Lcy11g015580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449063.1	8.3e-68	88.54	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]...	[more]
XP_004149569.1	1.4e-67	89.74	photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN560...	[more]
XP_038903014.1	4.1e-67	89.68	photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]	[more]
XP_023005588.1	1.2e-66	87.82	photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]	[more]
KAG6596752.1	1.2e-66	87.82	Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyr...	[more]

BLAST of Lcy11g015580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55670.1	5.6e-54	72.50	photosystem I subunit G	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016370	Photosystem I PsaG/PsaK, plant	PIRSF	PIRSF002912	PsaK	coord: 1..157 e-value: 1.2E-67 score: 224.4
IPR016370	Photosystem I PsaG/PsaK, plant	PANTHER	PTHR34195	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED	coord: 3..157
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 63..152 e-value: 3.2E-22 score: 78.3
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 124..141
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	1.10.286.40		coord: 63..157 e-value: 2.7E-48 score: 164.3
IPR017494	Photosystem I PsaG, plant	TIGRFAM	TIGR03051	TIGR03051	coord: 66..153 e-value: 5.0E-43 score: 143.5
None	No IPR available	PANTHER	PTHR34195:SF4	BNAC03G70700D PROTEIN	coord: 3..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g015580.1	Lcy11g015580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016020	membrane