Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGGAGGGACGCACGAGCGGAAGAAGAGGATGGCAGCGGCAACAGAAACGGAGGAGGAGCCAACTTGAAGAAGAAAAAGAAGCGTAGCGTGGAGCACAAGAGTTCCGCTTCTCCTCCTTTTATATTACAAAGTGGGGTCAGTTCCTTTTTTAAAGAAAATTAAAAAACTGCGGTCAATTTTGTTTTTCTTAAGAGACGGGATATTTTTTTTTTTTTTTTTTATGAATCACCCTCTAAAATAGACGGAAATGATAAATGTTCGACCTTTTCAAAACAAGGATATATGTCATTTTGCTTATGTGAGCATCCTAGTAAAATTATTATTTTACTCTCTACTCTAACCTCGTTCTTCCTTGCTACTCTTACTCTCTCTCCAATTTCTCTCTCCAATCTCTCTCTCTAAGGATGTCCATTTGCCCAATAAAGAAGAGGCCCTGTGGGGACAAGTCCCAAATGGGACGAGAAATCCCTATTTAAGCGGGGAATGGGAGAGGGGGTGGGGGAAAAATTTCCCACTCCCCGCTCCATTTACTTTTTATGTCAAGTTTACCCTTCAAGGTAAATTGTGTATCATTTTGTCTTGATTCTTAAAATTAAGTTGAGTTGAATTTTACATTTTGGAAGAAAAATAATGGTTAAAATATCATTTTGATCTCTATACTTTAGGTTTTGTCTCATTTTAGTACAAGTCAAGTGTCCAATTTTAGTTCATATACATTTAATAAAGCTTAAAGTTGGTTCCTAAGGTAAGTTTATTGTTAATTTTTCATTTAAAAAATGATTCTCTATTAACCTTAATTCTATAAATTATAGGATGTTCACATTGTGTCTTTTCTTGTATGGTAATTATTATTGATATTTAGCCAATTTCAATAAAAGTTAACTTTAAACTTATGGTAGGGACCAATTTTAAATTTTATTAAAAGTATATGGGCTAAAATTGAACATTTGAAAATAAGCACTAAAATGGAACAAAACTCCAAGTATCGAGTACCAAAATGGTGAAATGGTATTTTAATTAAAAAAAAAATGTACATTCACAAAACACAGTGATTAGTTTTATCTTGGTAGGTGATCATTTTCCTATTCAAATCTTTAATCTAATGAATTTCTTTTTTTCTTTTAAATTACAATAAATTGTGATTATTTAAATGTATTTACTATTATTTAATTTTTTTTTTCAAATCACACTATTCAAATTTCAATAACATCCATTTGACTAATTTTAATTTCAAAAAGAAATATAAAAGTTAGGGGTGTTCAAAATTAGACCGAAAACCGATCCAACCGAACCGACGTTAGTCAGTTGATTTTTTGACATAAACGGTCAGGGTCGGTTTTGTCCATTGAAAAACCGATGGTCGATCGGTCCAATAAAAATTTTAAAACCGGCCGACTAACCAATGATATAATAAGGAAAAAAAATTAAGGAAAAATACACTTTTACTCCCTGAGGTTTGAGTTAGGTTTCGTTTTGGTCCCTGAGGTTTCAAATTCAACAATTTAGTCCTTGAGGTTTGAGATAAGTAGCAATTTGGTCCCTGCCATCCATTTTGCCGTTAAATCTAATCGGTTGCTGACGTGGCACAATTATTTTAATTAAAAAAAATTAATTTTTTATTTTTTAAATTAAAAATATATTAAAATAATTAAAAATATTTATTTTTTATTATTATTTTTTAATTCTTTCTCTCCCTCCCTCTTCTCCTTCTTCTTCCCCATCCCCATCACCTTCTCCCTTCTTCCCCATATTCTTCTTCTTCAACTCCGATGGCCGGCCGCCGCTGGCTGCCAGATTTTTTTTTCTTCCCTCCTTCTTCTCTTCTTCTATAATAAGTGTAAAAGGTTATATAGAAAATAGATAAACGCCAAAAGTGTAAAACACAGATGAAGCGATTCTCATTGCGTCGCCCTCTTCTCTCCTTTAAAAACAGCGCAACTGCGTCCCCATTGCTTCACGGGAAAAAAAAAATTTGCAGAGCCGACCGCCATGGGTATAGCCGAAGCTTCTCCGACCAACATTGCTCCGCTTCTTCTTCGCAATCTCCTTACCTCTCTCTTCGTCTTTGCCGACAAATCCCTAATCAATTTGTCTAAGAAATACAAACTCCTCGAGATTATCCACTACCTTTTGGTCTCCTCCTTCCTCTTTTTCCTCTGA
mRNA sequence
ATGGCTGGGAGGGACGCACGAGCGGAAGAAGAGGATGGCAGCGGCAACAGAAACGGAGGAGGAGCCAACTTGAAGAAGAAAAAGAAGCGTAGCGTGGAGCACAAGAGTTCCGCTTCTCCTCCTTTTATATTACAAAAGCCGACCGCCATGGGTATAGCCGAAGCTTCTCCGACCAACATTGCTCCGCTTCTTCTTCGCAATCTCCTTACCTCTCTCTTCGTCTTTGCCGACAAATCCCTAATCAATTTGTCTAAGAAATACAAACTCCTCGAGATTATCCACTACCTTTTGGTCTCCTCCTTCCTCTTTTTCCTCTGA
Coding sequence (CDS)
ATGGCTGGGAGGGACGCACGAGCGGAAGAAGAGGATGGCAGCGGCAACAGAAACGGAGGAGGAGCCAACTTGAAGAAGAAAAAGAAGCGTAGCGTGGAGCACAAGAGTTCCGCTTCTCCTCCTTTTATATTACAAAAGCCGACCGCCATGGGTATAGCCGAAGCTTCTCCGACCAACATTGCTCCGCTTCTTCTTCGCAATCTCCTTACCTCTCTCTTCGTCTTTGCCGACAAATCCCTAATCAATTTGTCTAAGAAATACAAACTCCTCGAGATTATCCACTACCTTTTGGTCTCCTCCTTCCTCTTTTTCCTCTGA
Protein sequence
MAGRDARAEEEDGSGNRNGGGANLKKKKKRSVEHKSSASPPFILQKPTAMGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL
Homology
BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match:
A0A0A0KXY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109030 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 4.5e-15
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADKSLINLSKKYKLL++IH L++SSFLFFL
Sbjct: 1 MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLSKKYKLLQLIHALIISSFLFFL 56
BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match:
A0A5A7SNK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00210 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.0e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1 MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56
BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match:
A0A1S3CHW5 (uncharacterized protein LOC103501143 OS=Cucumis melo OX=3656 GN=LOC103501143 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.0e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1 MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56
BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match:
A0A5C7HAH4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_019200 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
M + E SPT IAPLLLRNL+TS+F+FADKSL+NLS+KYKLLE I YLLVS+FLFFL
Sbjct: 1 MVMEEYSPTTIAPLLLRNLITSIFIFADKSLLNLSQKYKLLEFIRYLLVSAFLFFL 56
BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match:
A0A1R3IWU1 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09311 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 1.0e-11
Identity = 39/56 (69.64%), Postives = 51/56 (91.07%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MG+ E SPT +APLL+RN++TSLF++ADKSL+NLS+KYKLLE+I Y+ +SSFLFFL
Sbjct: 1 MGMMENSPTTMAPLLIRNMVTSLFIYADKSLLNLSEKYKLLELIRYVAISSFLFFL 56
BLAST of Lcy11g014470 vs. NCBI nr
Match:
XP_004137277.1 (uncharacterized protein LOC101222931 [Cucumis sativus] >KGN53714.1 hypothetical protein Csa_014677 [Cucumis sativus])
HSP 1 Score: 90.5 bits (223), Expect = 9.3e-15
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADKSLINLSKKYKLL++IH L++SSFLFFL
Sbjct: 1 MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLSKKYKLLQLIHALIISSFLFFL 56
BLAST of Lcy11g014470 vs. NCBI nr
Match:
XP_038876704.1 (uncharacterized protein LOC120069090 [Benincasa hispida])
HSP 1 Score: 90.5 bits (223), Expect = 9.3e-15
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADK LINLSKKYKLLEIIH LL+SSFLFFL
Sbjct: 1 MGIAEASPTTMAPLLLRNLATSLFVFADKFLINLSKKYKLLEIIHTLLISSFLFFL 56
BLAST of Lcy11g014470 vs. NCBI nr
Match:
XP_008462861.1 (PREDICTED: uncharacterized protein LOC103501143 [Cucumis melo])
HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1 MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56
BLAST of Lcy11g014470 vs. NCBI nr
Match:
KAA0026035.1 (uncharacterized protein E6C27_scaffold581G00200 [Cucumis melo var. makuwa] >TYK22839.1 uncharacterized protein E5676_scaffold115G00210 [Cucumis melo var. makuwa])
HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1 MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56
BLAST of Lcy11g014470 vs. NCBI nr
Match:
TXG53944.1 (hypothetical protein EZV62_019200 [Acer yangbiense])
HSP 1 Score: 80.9 bits (198), Expect = 7.3e-12
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0
Query: 50 MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
M + E SPT IAPLLLRNL+TS+F+FADKSL+NLS+KYKLLE I YLLVS+FLFFL
Sbjct: 1 MVMEEYSPTTIAPLLLRNLITSIFIFADKSLLNLSQKYKLLEFIRYLLVSAFLFFL 56
BLAST of Lcy11g014470 vs. TAIR 10
Match:
AT5G64230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 42.7 bits (99), Expect = 2.1e-04
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query: 56 SPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
S + P LLRN++ ++ VFAD+SL+ +S KLLE + LV+ FLFFL
Sbjct: 5 SSAAVVPQLLRNIIVAVVVFADESLLQISGNSKLLEKLRVFLVTCFLFFL 54
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KXY7 | 4.5e-15 | 85.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109030 PE=4 SV=1 | [more] |
| A0A5A7SNK2 | 1.0e-14 | 83.93 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3CHW5 | 1.0e-14 | 83.93 | uncharacterized protein LOC103501143 OS=Cucumis melo OX=3656 GN=LOC103501143 PE=... | [more] |
| A0A5C7HAH4 | 3.6e-12 | 76.79 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_019200 PE=4 SV=1 | [more] |
| A0A1R3IWU1 | 1.0e-11 | 69.64 | Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09311 PE=4 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_004137277.1 | 9.3e-15 | 85.71 | uncharacterized protein LOC101222931 [Cucumis sativus] >KGN53714.1 hypothetical ... | [more] |
| XP_038876704.1 | 9.3e-15 | 89.29 | uncharacterized protein LOC120069090 [Benincasa hispida] | [more] |
| XP_008462861.1 | 2.1e-14 | 83.93 | PREDICTED: uncharacterized protein LOC103501143 [Cucumis melo] | [more] |
| KAA0026035.1 | 2.1e-14 | 83.93 | uncharacterized protein E6C27_scaffold581G00200 [Cucumis melo var. makuwa] >TYK2... | [more] |
| TXG53944.1 | 7.3e-12 | 76.79 | hypothetical protein EZV62_019200 [Acer yangbiense] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G64230.1 | 2.1e-04 | 48.00 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
