Lcy11g014470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g014470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr11: 29304830 .. 29306995 (-)
RNA-Seq Expression	Lcy11g014470
Synteny	Lcy11g014470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGAGGGACGCACGAGCGGAAGAAGAGGATGGCAGCGGCAACAGAAACGGAGGAGGAGCCAACTTGAAGAAGAAAAAGAAGCGTAGCGTGGAGCACAAGAGTTCCGCTTCTCCTCCTTTTATATTACAAAGTGGGGTCAGTTCCTTTTTTAAAGAAAATTAAAAAACTGCGGTCAATTTTGTTTTTCTTAAGAGACGGGATATTTTTTTTTTTTTTTTTTATGAATCACCCTCTAAAATAGACGGAAATGATAAATGTTCGACCTTTTCAAAACAAGGATATATGTCATTTTGCTTATGTGAGCATCCTAGTAAAATTATTATTTTACTCTCTACTCTAACCTCGTTCTTCCTTGCTACTCTTACTCTCTCTCCAATTTCTCTCTCCAATCTCTCTCTCTAAGGATGTCCATTTGCCCAATAAAGAAGAGGCCCTGTGGGGACAAGTCCCAAATGGGACGAGAAATCCCTATTTAAGCGGGGAATGGGAGAGGGGGTGGGGGAAAAATTTCCCACTCCCCGCTCCATTTACTTTTTATGTCAAGTTTACCCTTCAAGGTAAATTGTGTATCATTTTGTCTTGATTCTTAAAATTAAGTTGAGTTGAATTTTACATTTTGGAAGAAAAATAATGGTTAAAATATCATTTTGATCTCTATACTTTAGGTTTTGTCTCATTTTAGTACAAGTCAAGTGTCCAATTTTAGTTCATATACATTTAATAAAGCTTAAAGTTGGTTCCTAAGGTAAGTTTATTGTTAATTTTTCATTTAAAAAATGATTCTCTATTAACCTTAATTCTATAAATTATAGGATGTTCACATTGTGTCTTTTCTTGTATGGTAATTATTATTGATATTTAGCCAATTTCAATAAAAGTTAACTTTAAACTTATGGTAGGGACCAATTTTAAATTTTATTAAAAGTATATGGGCTAAAATTGAACATTTGAAAATAAGCACTAAAATGGAACAAAACTCCAAGTATCGAGTACCAAAATGGTGAAATGGTATTTTAATTAAAAAAAAAATGTACATTCACAAAACACAGTGATTAGTTTTATCTTGGTAGGTGATCATTTTCCTATTCAAATCTTTAATCTAATGAATTTCTTTTTTTCTTTTAAATTACAATAAATTGTGATTATTTAAATGTATTTACTATTATTTAATTTTTTTTTTCAAATCACACTATTCAAATTTCAATAACATCCATTTGACTAATTTTAATTTCAAAAAGAAATATAAAAGTTAGGGGTGTTCAAAATTAGACCGAAAACCGATCCAACCGAACCGACGTTAGTCAGTTGATTTTTTGACATAAACGGTCAGGGTCGGTTTTGTCCATTGAAAAACCGATGGTCGATCGGTCCAATAAAAATTTTAAAACCGGCCGACTAACCAATGATATAATAAGGAAAAAAAATTAAGGAAAAATACACTTTTACTCCCTGAGGTTTGAGTTAGGTTTCGTTTTGGTCCCTGAGGTTTCAAATTCAACAATTTAGTCCTTGAGGTTTGAGATAAGTAGCAATTTGGTCCCTGCCATCCATTTTGCCGTTAAATCTAATCGGTTGCTGACGTGGCACAATTATTTTAATTAAAAAAAATTAATTTTTTATTTTTTAAATTAAAAATATATTAAAATAATTAAAAATATTTATTTTTTATTATTATTTTTTAATTCTTTCTCTCCCTCCCTCTTCTCCTTCTTCTTCCCCATCCCCATCACCTTCTCCCTTCTTCCCCATATTCTTCTTCTTCAACTCCGATGGCCGGCCGCCGCTGGCTGCCAGATTTTTTTTTCTTCCCTCCTTCTTCTCTTCTTCTATAATAAGTGTAAAAGGTTATATAGAAAATAGATAAACGCCAAAAGTGTAAAACACAGATGAAGCGATTCTCATTGCGTCGCCCTCTTCTCTCCTTTAAAAACAGCGCAACTGCGTCCCCATTGCTTCACGGGAAAAAAAAAATTTGCAGAGCCGACCGCCATGGGTATAGCCGAAGCTTCTCCGACCAACATTGCTCCGCTTCTTCTTCGCAATCTCCTTACCTCTCTCTTCGTCTTTGCCGACAAATCCCTAATCAATTTGTCTAAGAAATACAAACTCCTCGAGATTATCCACTACCTTTTGGTCTCCTCCTTCCTCTTTTTCCTCTGA

mRNA sequence

ATGGCTGGGAGGGACGCACGAGCGGAAGAAGAGGATGGCAGCGGCAACAGAAACGGAGGAGGAGCCAACTTGAAGAAGAAAAAGAAGCGTAGCGTGGAGCACAAGAGTTCCGCTTCTCCTCCTTTTATATTACAAAAGCCGACCGCCATGGGTATAGCCGAAGCTTCTCCGACCAACATTGCTCCGCTTCTTCTTCGCAATCTCCTTACCTCTCTCTTCGTCTTTGCCGACAAATCCCTAATCAATTTGTCTAAGAAATACAAACTCCTCGAGATTATCCACTACCTTTTGGTCTCCTCCTTCCTCTTTTTCCTCTGA

Coding sequence (CDS)

ATGGCTGGGAGGGACGCACGAGCGGAAGAAGAGGATGGCAGCGGCAACAGAAACGGAGGAGGAGCCAACTTGAAGAAGAAAAAGAAGCGTAGCGTGGAGCACAAGAGTTCCGCTTCTCCTCCTTTTATATTACAAAAGCCGACCGCCATGGGTATAGCCGAAGCTTCTCCGACCAACATTGCTCCGCTTCTTCTTCGCAATCTCCTTACCTCTCTCTTCGTCTTTGCCGACAAATCCCTAATCAATTTGTCTAAGAAATACAAACTCCTCGAGATTATCCACTACCTTTTGGTCTCCTCCTTCCTCTTTTTCCTCTGA

Protein sequence

MAGRDARAEEEDGSGNRNGGGANLKKKKKRSVEHKSSASPPFILQKPTAMGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL

Homology

[Close]

BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match: A0A0A0KXY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109030 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.5e-15
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADKSLINLSKKYKLL++IH L++SSFLFFL
Sbjct: 1   MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLSKKYKLLQLIHALIISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match: A0A5A7SNK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00210 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.0e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1   MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match: A0A1S3CHW5 (uncharacterized protein LOC103501143 OS=Cucumis melo OX=3656 GN=LOC103501143 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.0e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1   MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match: A0A5C7HAH4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_019200 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           M + E SPT IAPLLLRNL+TS+F+FADKSL+NLS+KYKLLE I YLLVS+FLFFL
Sbjct: 1   MVMEEYSPTTIAPLLLRNLITSIFIFADKSLLNLSQKYKLLEFIRYLLVSAFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. ExPASy TrEMBL
Match: A0A1R3IWU1 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09311 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-11
Identity = 39/56 (69.64%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MG+ E SPT +APLL+RN++TSLF++ADKSL+NLS+KYKLLE+I Y+ +SSFLFFL
Sbjct: 1   MGMMENSPTTMAPLLIRNMVTSLFIYADKSLLNLSEKYKLLELIRYVAISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. NCBI nr
Match: XP_004137277.1 (uncharacterized protein LOC101222931 [Cucumis sativus] >KGN53714.1 hypothetical protein Csa_014677 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 9.3e-15
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADKSLINLSKKYKLL++IH L++SSFLFFL
Sbjct: 1   MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLSKKYKLLQLIHALIISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. NCBI nr
Match: XP_038876704.1 (uncharacterized protein LOC120069090 [Benincasa hispida])

HSP 1 Score: 90.5 bits (223), Expect = 9.3e-15
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADK LINLSKKYKLLEIIH LL+SSFLFFL
Sbjct: 1   MGIAEASPTTMAPLLLRNLATSLFVFADKFLINLSKKYKLLEIIHTLLISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. NCBI nr
Match: XP_008462861.1 (PREDICTED: uncharacterized protein LOC103501143 [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1   MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. NCBI nr
Match: KAA0026035.1 (uncharacterized protein E6C27_scaffold581G00200 [Cucumis melo var. makuwa] >TYK22839.1 uncharacterized protein E5676_scaffold115G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           MGIAEASPT +APLLLRNL TSLFVFADKSLINL+KKYK+L+IIH L++SSFLFFL
Sbjct: 1   MGIAEASPTTLAPLLLRNLATSLFVFADKSLINLAKKYKILQIIHALIISSFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. NCBI nr
Match: TXG53944.1 (hypothetical protein EZV62_019200 [Acer yangbiense])

HSP 1 Score: 80.9 bits (198), Expect = 7.3e-12
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 50  MGIAEASPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           M + E SPT IAPLLLRNL+TS+F+FADKSL+NLS+KYKLLE I YLLVS+FLFFL
Sbjct: 1   MVMEEYSPTTIAPLLLRNLITSIFIFADKSLLNLSQKYKLLEFIRYLLVSAFLFFL 56

[Close]

BLAST of Lcy11g014470 vs. TAIR 10
Match: AT5G64230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.1e-04
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 56  SPTNIAPLLLRNLLTSLFVFADKSLINLSKKYKLLEIIHYLLVSSFLFFL 106
           S   + P LLRN++ ++ VFAD+SL+ +S   KLLE +   LV+ FLFFL
Sbjct: 5   SSAAVVPQLLRNIIVAVVVFADESLLQISGNSKLLEKLRVFLVTCFLFFL 54

The following BLAST results are available for this feature:

BLAST of Lcy11g014470 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g014470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXY7	4.5e-15	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109030 PE=4 SV=1	[more]
A0A5A7SNK2	1.0e-14	83.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CHW5	1.0e-14	83.93	uncharacterized protein LOC103501143 OS=Cucumis melo OX=3656 GN=LOC103501143 PE=...	[more]
A0A5C7HAH4	3.6e-12	76.79	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_019200 PE=4 SV=1	[more]
A0A1R3IWU1	1.0e-11	69.64	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09311 PE=4 ...	[more]

BLAST of Lcy11g014470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137277.1	9.3e-15	85.71	uncharacterized protein LOC101222931 [Cucumis sativus] >KGN53714.1 hypothetical ...	[more]
XP_038876704.1	9.3e-15	89.29	uncharacterized protein LOC120069090 [Benincasa hispida]	[more]
XP_008462861.1	2.1e-14	83.93	PREDICTED: uncharacterized protein LOC103501143 [Cucumis melo]	[more]
KAA0026035.1	2.1e-14	83.93	uncharacterized protein E6C27_scaffold581G00200 [Cucumis melo var. makuwa] >TYK2...	[more]
TXG53944.1	7.3e-12	76.79	hypothetical protein EZV62_019200 [Acer yangbiense]	[more]

BLAST of Lcy11g014470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64230.1	2.1e-04	48.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g014470.1	Lcy11g014470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane