Homology
BLAST of Lcy11g008280 vs. ExPASy Swiss-Prot
Match:
Q54KJ8 (General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 GN=gtf2e2 PE=3 SV=1)
HSP 1 Score: 82.4 bits (202), Expect = 8.6e-15
Identity = 72/271 (26.57%), Postives = 138/271 (50.92%), Query Frame = 0
Query: 10 FKKQQERCQTTLTGI----AASKSTPKFTPALASSIVRPPAPAVKFSNDTERLQHINSIR 69
FK+ Q + TL I +++ S K+ P ++ A + S T ++
Sbjct: 6 FKETQMKAIETLNSIKKPSSSTNSAFKYIPKISGGGGSSSANR-QSSIYTANTLRDKQVK 65
Query: 70 KSPVGAQIKRVIDLL--LETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHYDGR-R 129
+ P + +++ L LE A T E ++ ++ I+ + + LRNN K+ G R
Sbjct: 66 EKPSNRIVYDIVNYLKTLEGIPADTKEIMHSTNHM-IDDKPEILELLRNNEKIIDHGNDR 125
Query: 130 FSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSNFDSQ 189
FS+K K +++ + +L L+ +P GI V +L +SY D++ LK + Q++ + +S
Sbjct: 126 FSFKPKFNVRTQRDILDLLPNYPGGILVSELAESYNNAESDVKKLKETKQIFAIKAAESA 185
Query: 190 EDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHV 249
DI +PND R+++ + +L ++ I+LP + D+EK+++ G+ + + +A+
Sbjct: 186 CDIIFPNDERLRVPLSSELVDMWKSIKLPNE-ADLEKEMKDAGL----SVVESVESARQT 245
Query: 250 ASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
S+KLK ++KK + TK+TN H+ N
Sbjct: 246 KSTKLKKERKK----RITKVTNTHIENFNPN 265
BLAST of Lcy11g008280 vs. ExPASy Swiss-Prot
Match:
P79011 (Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tfa2 PE=1 SV=2)
HSP 1 Score: 73.9 bits (180), Expect = 3.1e-12
Identity = 60/205 (29.27%), Postives = 108/205 (52.68%), Query Frame = 0
Query: 71 AQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHYDGRR--FSYKSK 130
+Q+ ++ L E + T E+I A Y+ + + L+ N +++YD R F++K
Sbjct: 81 SQLHYAVEYLKERNEPKTAEEI--ASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPL 140
Query: 131 HDLKDKNQLLYLI--RKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL-SNFDSQEDI 190
H+++ LL + +K G+++ +L+D +P V +L+ L+ G+V LL + D +
Sbjct: 141 HNIRSGAGLLAYLDSQKTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKM 200
Query: 191 AYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHV 250
+ ND VD + +Q + EI +P LD+ +L K G+KP + +T KR + Q
Sbjct: 201 VWRNDKSCDCHVDKEFQQVWHEIPIP-PTLDLASELGKYGLKPTSVDPSTVKRAGHNQ-- 260
Query: 251 ASSKLKPKKKKQEISKRTKLTNAHL 268
PK+KK + ++R K+TN HL
Sbjct: 261 -----TPKQKKPK-TRRGKITNTHL 274
BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match:
A0A0A0KWU5 (Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=Csa_4G049080 PE=3 SV=1)
HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 259/277 (93.50%), Postives = 267/277 (96.39%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
MALQE+LDRFKKQQERCQ+TL+GIAA SKSTPKFTPA A+SI RPPAPAVKFSNDTE
Sbjct: 1 MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60
Query: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
HYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277
BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match:
A0A1S3BS95 (Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC103493148 PE=3 SV=1)
HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
MALQE+LDRFKKQQERCQ+TL+GIAA SKSTPKFTPA A+SI RP APAVKFSNDTE
Sbjct: 1 MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
Query: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277
BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match:
A0A5A7TNR4 (Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004520 PE=3 SV=1)
HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
MALQE+LDRFKKQQERCQ+TL+GIAA SKSTPKFTPA A+SI RP APAVKFSNDTE
Sbjct: 1 MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
Query: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277
BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match:
A0A6J1J372 (Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482983 PE=4 SV=1)
HSP 1 Score: 492.7 bits (1267), Expect = 1.0e-135
Identity = 256/276 (92.75%), Postives = 266/276 (96.38%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPALASSIVRPPAPAVKFSNDTER 60
MALQEKLDRFK+QQERCQTTL+GIAASK +TP+FTPA A+S RPPAPA+KFSNDTER
Sbjct: 1 MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAAS--RPPAPAIKFSNDTER 60
Query: 61 LQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVH 120
LQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAV+DSLRNNPKVH
Sbjct: 61 LQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKVH 120
Query: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLS 180
YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ LKASGQVWLLS
Sbjct: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLS 180
Query: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
NFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA
Sbjct: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
Query: 241 NAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
NAQ+VASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 NAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274
BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match:
A0A6J1C4F9 (Transcription initiation factor IIE subunit beta OS=Momordica charantia OX=3673 GN=LOC111008395 PE=4 SV=1)
HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135
Identity = 257/275 (93.45%), Postives = 263/275 (95.64%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPALASSIVRPPAPAVKFSNDTERL 60
MALQ+KLDRFKKQQERCQTTLTGIAASK STPKFTPA A+ RPPAPAVKFSNDTERL
Sbjct: 1 MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERL 60
Query: 61 QHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHY 120
QHINSIRKSPVGAQIKRVIDLLLETR A TPEQIN+ACYVDINSNKAV+DSLRNNPKVHY
Sbjct: 61 QHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFDSLRNNPKVHY 120
Query: 121 DGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSN 180
DGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDSYPTVMEDLQ LKASGQVWLLSN
Sbjct: 121 DGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSN 180
Query: 181 FDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240
FDSQEDIAYPNDPRIQIKVDDDLK FREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN
Sbjct: 181 FDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240
Query: 241 AQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
AQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 AQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 275
BLAST of Lcy11g008280 vs. NCBI nr
Match:
XP_011653191.1 (general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothetical protein Csa_014626 [Cucumis sativus])
HSP 1 Score: 502.3 bits (1292), Expect = 2.7e-138
Identity = 259/277 (93.50%), Postives = 267/277 (96.39%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
MALQE+LDRFKKQQERCQ+TL+GIAA SKSTPKFTPA A+SI RPPAPAVKFSNDTE
Sbjct: 1 MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60
Query: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
HYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277
BLAST of Lcy11g008280 vs. NCBI nr
Match:
XP_008452012.1 (PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_008452013.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >KAA0044840.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa] >TYK16624.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 498.8 bits (1283), Expect = 2.9e-137
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
MALQE+LDRFKKQQERCQ+TL+GIAA SKSTPKFTPA A+SI RP APAVKFSNDTE
Sbjct: 1 MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
Query: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277
BLAST of Lcy11g008280 vs. NCBI nr
Match:
XP_022984812.1 (general transcription factor IIE subunit 2-like [Cucurbita maxima])
HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 256/276 (92.75%), Postives = 266/276 (96.38%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPALASSIVRPPAPAVKFSNDTER 60
MALQEKLDRFK+QQERCQTTL+GIAASK +TP+FTPA A+S RPPAPA+KFSNDTER
Sbjct: 1 MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAAS--RPPAPAIKFSNDTER 60
Query: 61 LQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVH 120
LQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAV+DSLRNNPKVH
Sbjct: 61 LQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKVH 120
Query: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLS 180
YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ LKASGQVWLLS
Sbjct: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLS 180
Query: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
NFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA
Sbjct: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
Query: 241 NAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
NAQ+VASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 NAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274
BLAST of Lcy11g008280 vs. NCBI nr
Match:
XP_038906431.1 (general transcription factor IIE subunit 2-like [Benincasa hispida])
HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 258/277 (93.14%), Postives = 265/277 (95.67%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIA----ASKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
MALQE+LDRFKKQQERCQTTL+GIA ASKSTPKFTPA A+S RPPAPAVKFSNDTE
Sbjct: 1 MALQEQLDRFKKQQERCQTTLSGIAAAKSASKSTPKFTPAPAAS--RPPAPAVKFSNDTE 60
Query: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAV+DSLRNNPKV
Sbjct: 61 RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120
Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
ANAQHVASSK K KKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKLKKKKQEISKRTKLTNAHLPELFKN 275
BLAST of Lcy11g008280 vs. NCBI nr
Match:
XP_022136771.1 (general transcription factor IIE subunit 2-like [Momordica charantia])
HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 257/275 (93.45%), Postives = 263/275 (95.64%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPALASSIVRPPAPAVKFSNDTERL 60
MALQ+KLDRFKKQQERCQTTLTGIAASK STPKFTPA A+ RPPAPAVKFSNDTERL
Sbjct: 1 MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERL 60
Query: 61 QHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHY 120
QHINSIRKSPVGAQIKRVIDLLLETR A TPEQIN+ACYVDINSNKAV+DSLRNNPKVHY
Sbjct: 61 QHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFDSLRNNPKVHY 120
Query: 121 DGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSN 180
DGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDSYPTVMEDLQ LKASGQVWLLSN
Sbjct: 121 DGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSN 180
Query: 181 FDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240
FDSQEDIAYPNDPRIQIKVDDDLK FREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN
Sbjct: 181 FDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240
Query: 241 AQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
AQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 AQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 275
BLAST of Lcy11g008280 vs. TAIR 10
Match:
AT4G20330.1 (Transcription initiation factor TFIIE, beta subunit )
HSP 1 Score: 343.2 bits (879), Expect = 1.9e-94
Identity = 187/280 (66.79%), Postives = 230/280 (82.14%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPALASSIV--RPPAPAVKFSNDT 60
MAL+E+LD+F KQQ +CQ+TL+ IA+S+ S+ + L ++I +P A VKFS+DT
Sbjct: 1 MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDT 60
Query: 61 ERLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPK 120
ERLQ+IN+IRK+PVGAQIKRVIDLL E R ALTPEQIN+ C+VD+++NKAV+DSLR NPK
Sbjct: 61 ERLQNINNIRKAPVGAQIKRVIDLLYERRLALTPEQINEWCHVDMHANKAVFDSLRKNPK 120
Query: 121 VHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWL 180
HYDGRRFSYK+ HD+ DKNQLL L+RK+ +GIAV+DLKD+YP VMEDL+ L ASG ++L
Sbjct: 121 AHYDGRRFSYKATHDVNDKNQLLSLVRKYLDGIAVVDLKDAYPNVMEDLKALSASGDIYL 180
Query: 181 LSNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKR 240
LSN SQEDIAYPND + +IKVDD+ K FR+I +P DMLDVEK+L K G+KPATNTA+R
Sbjct: 181 LSN--SQEDIAYPNDFKCEIKVDDEFKALFRDINIPNDMLDVEKELLKIGLKPATNTAER 240
Query: 241 RANAQ-HVASSKLK-PKKKKQEISKRTKLTNAHLPELFKN 274
RA AQ H S+K K KKKKQEISKRTKLTNAHLPELF+N
Sbjct: 241 RAAAQTHGISNKPKDKKKKKQEISKRTKLTNAHLPELFQN 278
BLAST of Lcy11g008280 vs. TAIR 10
Match:
AT4G21010.1 (Transcription initiation factor TFIIE, beta subunit )
HSP 1 Score: 282.0 bits (720), Expect = 5.3e-76
Identity = 160/278 (57.55%), Postives = 213/278 (76.62%), Query Frame = 0
Query: 1 MALQEKLDRFKKQQERCQTTLTGIAASKS--TPKFTPALASSIVRPPAPAVKFSNDTERL 60
MAL+E+LD+F KQQE+CQ+TL+ I++S++ + + PA A++ +P KFS +T++L
Sbjct: 1 MALREQLDKFNKQQEKCQSTLSSISSSRTALSRSYVPA-ATTSQKPNVFRGKFSENTKQL 60
Query: 61 QHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHY 120
QHI +IR S VGAQ+K VIDLL +TR A T EQIN+ACYVD+++NKAV+DSLR NPKVHY
Sbjct: 61 QHITNIRNSAVGAQMKIVIDLLFKTRLAYTAEQINEACYVDMHNNKAVFDSLRKNPKVHY 120
Query: 121 DGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQV-WLLS 180
DGRRFSYK+ H++KDK QLL + K + I V DLKD+YP VMEDL+ LK+SG++ WLLS
Sbjct: 121 DGRRFSYKATHNIKDKKQLLSFVNKSDKVIDVSDLKDAYPNVMEDLKSLKSSGEIFWLLS 180
Query: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
N DS+E Y N+ K+DD+LK FR+I +P DML+VEK+L K G+KPATN A+RRA
Sbjct: 181 NTDSKEGTVYRNNMEYP-KIDDELKALFRDI-IPSDMLEVEKELLKIGLKPATNIAERRA 240
Query: 241 NAQ-HVASSKLK-PKKKKQEISKRTKLTNAHLPELFKN 274
Q H S+K K KKKK+EI+ RTKLTN+H+ ELF++
Sbjct: 241 AEQLHGVSNKPKDKKKKKKEITNRTKLTNSHMLELFQS 275
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q54KJ8 | 8.6e-15 | 26.57 | General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 ... | [more] |
P79011 | 3.1e-12 | 29.27 | Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (s... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KWU5 | 1.3e-138 | 93.50 | Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=C... | [more] |
A0A1S3BS95 | 1.4e-137 | 93.50 | Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A5A7TNR4 | 1.4e-137 | 93.50 | Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=... | [more] |
A0A6J1J372 | 1.0e-135 | 92.75 | Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=... | [more] |
A0A6J1C4F9 | 1.3e-135 | 93.45 | Transcription initiation factor IIE subunit beta OS=Momordica charantia OX=3673 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_011653191.1 | 2.7e-138 | 93.50 | general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothe... | [more] |
XP_008452012.1 | 2.9e-137 | 93.50 | PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_00... | [more] |
XP_022984812.1 | 2.1e-135 | 92.75 | general transcription factor IIE subunit 2-like [Cucurbita maxima] | [more] |
XP_038906431.1 | 2.8e-135 | 93.14 | general transcription factor IIE subunit 2-like [Benincasa hispida] | [more] |
XP_022136771.1 | 2.8e-135 | 93.45 | general transcription factor IIE subunit 2-like [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT4G20330.1 | 1.9e-94 | 66.79 | Transcription initiation factor TFIIE, beta subunit | [more] |
AT4G21010.1 | 5.3e-76 | 57.55 | Transcription initiation factor TFIIE, beta subunit | [more] |