Lcy11g008280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g008280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Transcription initiation factor IIE subunit beta
Location	Chr11: 8712612 .. 8718284 (+)
RNA-Seq Expression	Lcy11g008280
Synteny	Lcy11g008280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGCAAGAAAAACTTGATAGGTTTAAGAAACAACAAGAAAGATGTCAGACTACCTTGACTGGCATTGCTGCTTCCAAGTCTACACCCAAGTTTACGCCTGCACTGGCTTCTTCCATTGTGAGACCTCCGGCTCCTGCTGTGAAATTTTCAAATGATACTGAGAGACTTCAACACATTAACAGCATAAGAAAATCTCCAGTTGGGGCTCAGATCAAGAGGGTTATTGACCTGCTGTTGGAGGTTCACACCTTTCACCCATGTTTGTTTTTTTAAAAATATTTTCCCCTTTGGTTTTGTTCCTTCTATTTCATTTGTTTTCCTGGGTTTCTTTTGTTTGATCGAATTCTTGAATGGAAGGCTATGTATAGTATGGGATTTAATGGGCATGTATTGATTTGAAATCTGCCGAGCTAATGCTGAAATTTCTCATATATATTTACTAACTTCAATATATTTTTTAACGGATGATTTTTTAACCGGGATATTTGGCTGGCTTGAGAGAAATATAGGACTTTTTAAGGTATTGAGACTTGTGATTGCCTTTAGATGGCAAGAGTAGCTAGGATCCTCTTCAAGTTAAAGGTATTTTACAATCTTACAGCTTGCCTATTCTGCATGTTAACAGACAAGACAAGCCCTTACACCAGAGCAAATCAATGATGCATGTTATGTTGATATAAATTCCAACAAAGCTGTCTATGATAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGACGTTTCTCATACAAGGTAATTTATATTCTCAAATACCTATAGAATTTGCATGAACTTGTACTTATTTTGTCTAAATGTTTGGACCGTCAATGGTGGATGACATTTTTTTCCTCATGTATTCAGTCCAAGCATGACCTGAAGGATAAGAATCAACTTCTATACTTGATACGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAAGATTCTTATCCAACCGTTATGGAAGACTTGCAAGTACGTATACTTGAGAATTTTTTTATGTGCTTTTTCTATTTTGAATGGAAAAGTGCAATATACCAAGTAACCTTTGGATGGCTATTCTTATTGAACAGCTTTGGCATCAACTTTTGTAGAGTTTAATATAGGGACAATTTAGGGCTTCAAAACTCTTATGCAAGGGTTCTTTTCATTATTTGAATGAAAAATTTCGTTTCTGGTTCGAAAAGAAATATCTTATGCAAGGGTTCTCGAGGTTGTGTATTTTATTTGCTTAGTAATAGGAATCTTATAGGAATATAAGTAAGGTGGAATTATGAATGTTAGTAAGGGTATATTAGTAAGTAGTTAAAGAGTTTGTTAGGATATTGGGTTATAAATAGAGGGAGTGGGAAAGGAGGGAGGGTAAGCTTTGACTCGGTGAGTTTAGGGCTTGAGTGATCTCAAGAGATGGGGAGTCCAAGTACCTCGAATAATTGGTTTATCGTGTAGTTCCTTTATCTTTTTATATTGCAATCCATTGTGGTTATATTTTGGTTCATATCAAATTGGTATCAGAGCTGTTCGGTTCTGACATGGAGTTAGAAGAGTTAAGCGCAAATACAAGTGAAATAATATTGAAGGCTTTACATAAAGGAATGGACTTGTTGAAGAATCAATTGGATGAGCAAATGAATTCAGTGTTCAAATTTGGACAGCATAGGTTGGCACAGGATTTTGGAGACAACCAAAAGAAATAAAGAATTGTCGGAATCTTCATATCTTTAAGATAGAGAAACAAATTTCATTGATAAATGAAATAAAGGGAGAAAGGGCTCCCAAGTAGATCATTACAAGAAGGAGGTCCAATTGGAAATTAAAGAAGGAAGACTATAGTCTCTAAAAGGGTGTTTACATTTACACCAATAAAAAGTATTGAATAAAATCAAATCCCAAAAAGCAGTAAAATTGAGAGAGACGTCCCTGAAAATTTTGCCATTCCGCTCACACCAAAGATACCAAAAGAAAACTCTATTGATGGCAAGCCAAAGAGTTTTCTTTACACCATGAAAGGGATGACCCACAAAAACTGAAGCAAGGAGATCAAAAATAGTTCCAGGGAAAACCATATTCCACCCAAAAGCTTCCACCATAATGGACCAATATTGTGATGCAAAAGAACAATGACCAAAAAGATGAATTGGGCACTCAGCACTTGCACAACACATAACACACCACGAGGGAGAGAAGAAAATGAGGCATTCTTCTTTGAATTTTGTCCGCTGTATTAATTCCACCATGACTAAGCTCCCATAAGAAAATTTTAATCTTTTTTGGGTAACAATCCTTCCATAGCAAGTTTTATTAGGAGGAGGGCTTAAAGGAAAAGCCAAAGTCCCATGGAGCAATTTCTCTAGAGCAATTATGTGGCATCTTTGGAAGGAAAGGAATGCAAGAGTGTTCTCTGATAAGCATATGCATTTTGCTTTTTTTTGTGATCTTGTACAGCATACGGCCTCGAATTGGAGTGCCCTTGATAGTATTTTTTGTAATTACTCTGCTGCCTTGATTAACCTTCAATGGAAGGCTTTTGTGTAGTTTTGGTTGGAGGAGGGATGCCTTATCCCTCGGTCCTTTGGTTGTTGTTTTTGGGCAAAGTCTTTGAATGAAATTCTCTTATTCTTCTCAAAAAAAAAAAAAATCCTTCCATATCATTGAAATGAGATTGTTCCTGGTCGGACCCTTTGAATGGACTAAATCTTCCATCAAAGACCGAACTGTAAATGAATGAGAGGGATCAAGATGTCAATACCACGAATCTTGTGTATTCCTGAAAATAACTGATGATAGGAGATGTGAGAGACTAGCCCATTCTTGAATTTCCTCCTCATTGAGATTTCGACGAAGCCCTAAATCCCATGCTTTAGATTCTGAATTCCAGATTTGAGCAATCGTTGCCATAGTTCTAGATGATAAACGATAAAGTCTTGTGGCAAGCGGGGATTTGCGCTATTATTTGGGGGCTTTGGGGTGAGAGAAATAATAGGACGTTTAGAGGGTTTGAGAGGGATTCGGCTGAGGTTTGGTCCCTTGTGAGATATAACGTTTCTCTTTGGGCGTCGGTGACGCGGTTATTTTGTAATTATTCCATAGGTCTTATTATTTTGGATTGGAGCCCCTTTATCTAATGGGGTTTCCCTCTTTTTTTTGTGGGCTGGTTGTTTTTGGTCGCCCTTGTATTATTTCATTTTTTCTCAATGAAAGCATGGTTTTTCATAAAAAAAAAAAAAAGTCTAGGATAAGAGGATCTTAGAGATATACCAGCAAGCCACGAATCATTCCAAAAAGATGTATGAGTCCCATTTCCAAGCCTACTTAGAATACGACTACCAACAATATCAATGGTGCTACAAATATGTTTCCAAAGAGATTTCGTTGATCCCCCATAATGGGTTTATGGTTCTAATTACTCAAGAGGTTAATATAAGAACTTATAGGGGTCTAGTTTGTAGTTGTGTTCGGTAGATTAGGACTTCTTGTATATAAATGCCATGTAGAATTTAGCAATCAACATATGAAGTCTTGATTTGACTAATAAAGGGGTTGTTTGAGTGTTACGAAAAACAACTCCATGCTTTTTGGGTATCTAGTGAATATGAATATTAAGTGCACAAAAACTTTCTAAACTATCAACAAAAAAATGTTCTTAAATGAAGTTTTGAAAATAAAAGCAAAGGAGTTTTTTCCTGAATAGCTCTAAAAAAAGCCCTTAAATTCATTTGAGCTACCACTCCTCCCCTCCCCCCTTCCTGTTTATTTTTCTTTAGACAATTCCCCATGGAAATACAAAATATCCCAGTCTATTCGAGAGGGCTGGTACTCTCCCTTCCTCTCCAAGCTCACTAAAGCAACAACACAAAAAGCATAAAGACTGGCTAACGTTCCTTTCCCATGAATATCCTACCCACATTCCTTCCATGGTCCCCTCTTTCCTATGTAACTAACTTGTCGAGGGTGAGTTAGCCTTCCTACCTCTCCTTGTATACTGAATTGTGATGGGGGGCCTAACAGTTTTGTTCATCCAACAATTCCTATTCCTGAAGTAAGAGAACTATAGTGTTTTTATGAGCAGTAAAAATTTTAAATGGAAGTATTTAGCCCCATGGTTTATGGTCTTTGTCAAGATTGTTGCACCTAAACTTTCGTCAAGAATTTGTAAAAATCTACAAGAAACGTTTGCCTTTTGGTATAAAACCTGTTCAAAAAGCTAAAAGGAAAAGAGTGGCAGGGTCCAATCATCCATGTCACCCATCTACAAGACGATTGAGGTATGAGGTCAATAAAAAGATGAAGAATTGAAGATAACATGTTATTGAGTACGAAAGTTAGATGGAGATGTGGAGATTCATAGAGCATCATTAAATCTTGGGAGTTGGTCTATGAATTATTCACTGTCATCAGGAAAAAGGTTTGAAAATTTGAATGTGCCCAGCATTCTTCAATAAATGAGAAGAATAAACTTCCATATATGAATTAAAAGTCGAAAAAACTACCTCTGGTTTTGGAACACTCATCCTTGAATGCTTTGAAGCTTGAGGAGGATTAGCTTTTTTCAACCAGGGAAAACCAGGGGAATGTAGGAAATTACTGTTTTACGTAAGGTTTTTGATCTTTTGAATTTAGTTGATTAGGATAAGAATTAGGAGTCATAGTAAGTCTATCTGATTAGCAGATTACTGGGAGTTTTATTAGAATTTGGTTATTCTTTTTATATTAATATCCATGTCCATACCTTTTTTTTTTTTTTTTGAAAGATTTCTTAATACATAGAGAAATTTCGAATGGTAATAACCATTGCTTTTGGGTTATTCATCAAGTTTAAGTTATGAGGAGTGACCTCTTCAAAAAAAAAAAAAAAAGTTATGAGGAGTGATTTGTGGGAGTTGTAAATTCGGACTCCTTGTAGTTTTTTCGGTAATAGTGTAAATTATAATACTCGGCTATAGTAGGAGGAACCGCTTTGAGATTGTTTCTATTGACTTCCAAACTTATGTTTATTTGTTTGCATACTTGTTGATCATTATTTTATTTTGGCCTCCCAAACTATATAAAGTTTTGCTTTGATGGAATCCCTGCTCCTATATTTACACAAATTCTTCTATTATATTATGAATGGAAAGTGCATGGCTGTGTACTTTTTCAAAGCTTGTTTTTTTCCAAATGATTTAGGACATGTATGGGAGTTATTTTGGAATGGCAAAAAATCACTTTTCTAAAAATGGCATGACCAAAATTGATTTTTGTCCTTCCATAATCACTCCCAAACATGTCCTTAGTAGGGTATAGGTGGCCATCCATTCTTTTGAGCTAACAATATCTCTTTACCACTTGTTTAGGGTCTAAAAGCCTCTGGCCAGGTCTGGCTTCTCTCAAACTTTGATTCACAAGAAGATATTGCATATCCAAATGACCCAAGAATTCAAATCAAGGTAGACGACGATTTGAAGCAATTTTTTCGAGAGATCGAATTACCTCGTGACATGCTTGACGTCGAAAAGGATCTTCAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCCAATGCACAACACGTGGCATCCTCGAAGCTGAAGCCCAAGAAAAAGAAGCAAGAGATCAGCAAGAGGACCAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAATTAG

mRNA sequence

ATGGCGTTGCAAGAAAAACTTGATAGGTTTAAGAAACAACAAGAAAGATGTCAGACTACCTTGACTGGCATTGCTGCTTCCAAGTCTACACCCAAGTTTACGCCTGCACTGGCTTCTTCCATTGTGAGACCTCCGGCTCCTGCTGTGAAATTTTCAAATGATACTGAGAGACTTCAACACATTAACAGCATAAGAAAATCTCCAGTTGGGGCTCAGATCAAGAGGGTTATTGACCTGCTGTTGGAGACAAGACAAGCCCTTACACCAGAGCAAATCAATGATGCATGTTATGTTGATATAAATTCCAACAAAGCTGTCTATGATAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGACGTTTCTCATACAAGTCCAAGCATGACCTGAAGGATAAGAATCAACTTCTATACTTGATACGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAAGATTCTTATCCAACCGTTATGGAAGACTTGCAAGGTCTAAAAGCCTCTGGCCAGGTCTGGCTTCTCTCAAACTTTGATTCACAAGAAGATATTGCATATCCAAATGACCCAAGAATTCAAATCAAGGTAGACGACGATTTGAAGCAATTTTTTCGAGAGATCGAATTACCTCGTGACATGCTTGACGTCGAAAAGGATCTTCAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCCAATGCACAACACGTGGCATCCTCGAAGCTGAAGCCCAAGAAAAAGAAGCAAGAGATCAGCAAGAGGACCAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAATTAG

Coding sequence (CDS)

ATGGCGTTGCAAGAAAAACTTGATAGGTTTAAGAAACAACAAGAAAGATGTCAGACTACCTTGACTGGCATTGCTGCTTCCAAGTCTACACCCAAGTTTACGCCTGCACTGGCTTCTTCCATTGTGAGACCTCCGGCTCCTGCTGTGAAATTTTCAAATGATACTGAGAGACTTCAACACATTAACAGCATAAGAAAATCTCCAGTTGGGGCTCAGATCAAGAGGGTTATTGACCTGCTGTTGGAGACAAGACAAGCCCTTACACCAGAGCAAATCAATGATGCATGTTATGTTGATATAAATTCCAACAAAGCTGTCTATGATAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGACGTTTCTCATACAAGTCCAAGCATGACCTGAAGGATAAGAATCAACTTCTATACTTGATACGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAAGATTCTTATCCAACCGTTATGGAAGACTTGCAAGGTCTAAAAGCCTCTGGCCAGGTCTGGCTTCTCTCAAACTTTGATTCACAAGAAGATATTGCATATCCAAATGACCCAAGAATTCAAATCAAGGTAGACGACGATTTGAAGCAATTTTTTCGAGAGATCGAATTACCTCGTGACATGCTTGACGTCGAAAAGGATCTTCAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCCAATGCACAACACGTGGCATCCTCGAAGCTGAAGCCCAAGAAAAAGAAGCAAGAGATCAGCAAGAGGACCAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAATTAG

Protein sequence

MALQEKLDRFKKQQERCQTTLTGIAASKSTPKFTPALASSIVRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN

Homology

[Close]

BLAST of Lcy11g008280 vs. ExPASy Swiss-Prot
Match: Q54KJ8 (General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 GN=gtf2e2 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-15
Identity = 72/271 (26.57%), Postives = 138/271 (50.92%), Query Frame = 0


Query: 10  FKKQQERCQTTLTGI----AASKSTPKFTPALASSIVRPPAPAVKFSNDTERLQHINSIR 69
           FK+ Q +   TL  I    +++ S  K+ P ++       A   + S  T        ++
Sbjct: 6   FKETQMKAIETLNSIKKPSSSTNSAFKYIPKISGGGGSSSANR-QSSIYTANTLRDKQVK 65

Query: 70  KSPVGAQIKRVIDLL--LETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHYDGR-R 129
           + P    +  +++ L  LE   A T E ++   ++ I+    + + LRNN K+   G  R
Sbjct: 66  EKPSNRIVYDIVNYLKTLEGIPADTKEIMHSTNHM-IDDKPEILELLRNNEKIIDHGNDR 125

Query: 130 FSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSNFDSQ 189
           FS+K K +++ +  +L L+  +P GI V +L +SY     D++ LK + Q++ +   +S 
Sbjct: 126 FSFKPKFNVRTQRDILDLLPNYPGGILVSELAESYNNAESDVKKLKETKQIFAIKAAESA 185

Query: 190 EDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHV 249
            DI +PND R+++ +  +L   ++ I+LP +  D+EK+++  G+    +  +   +A+  
Sbjct: 186 CDIIFPNDERLRVPLSSELVDMWKSIKLPNE-ADLEKEMKDAGL----SVVESVESARQT 245

Query: 250 ASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
            S+KLK ++KK    + TK+TN H+     N
Sbjct: 246 KSTKLKKERKK----RITKVTNTHIENFNPN 265

[Close]

BLAST of Lcy11g008280 vs. ExPASy Swiss-Prot
Match: P79011 (Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tfa2 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 3.1e-12
Identity = 60/205 (29.27%), Postives = 108/205 (52.68%), Query Frame = 0


Query: 71  AQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHYDGRR--FSYKSK 130
           +Q+   ++ L E  +  T E+I  A Y+       + + L+ N +++YD R   F++K  
Sbjct: 81  SQLHYAVEYLKERNEPKTAEEI--ASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPL 140

Query: 131 HDLKDKNQLLYLI--RKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL-SNFDSQEDI 190
           H+++    LL  +  +K   G+++ +L+D +P V  +L+ L+  G+V LL +  D    +
Sbjct: 141 HNIRSGAGLLAYLDSQKTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKM 200

Query: 191 AYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHV 250
            + ND      VD + +Q + EI +P   LD+  +L K G+KP +   +T KR  + Q  
Sbjct: 201 VWRNDKSCDCHVDKEFQQVWHEIPIP-PTLDLASELGKYGLKPTSVDPSTVKRAGHNQ-- 260

Query: 251 ASSKLKPKKKKQEISKRTKLTNAHL 268
                 PK+KK + ++R K+TN HL
Sbjct: 261 -----TPKQKKPK-TRRGKITNTHL 274

[Close]

BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match: A0A0A0KWU5 (Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=Csa_4G049080 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 259/277 (93.50%), Postives = 267/277 (96.39%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
           MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTPA A+SI RPPAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match: A0A1S3BS95 (Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC103493148 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
           MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTPA A+SI RP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match: A0A5A7TNR4 (Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004520 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
           MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTPA A+SI RP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match: A0A6J1J372 (Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482983 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.0e-135
Identity = 256/276 (92.75%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPALASSIVRPPAPAVKFSNDTER 60
           MALQEKLDRFK+QQERCQTTL+GIAASK   +TP+FTPA A+S  RPPAPA+KFSNDTER
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAAS--RPPAPAIKFSNDTER 60

Query: 61  LQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVH 120
           LQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAV+DSLRNNPKVH
Sbjct: 61  LQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKVH 120

Query: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLS 180
           YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ LKASGQVWLLS
Sbjct: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLS 180

Query: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
           NFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA
Sbjct: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240

Query: 241 NAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           NAQ+VASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 NAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of Lcy11g008280 vs. ExPASy TrEMBL
Match: A0A6J1C4F9 (Transcription initiation factor IIE subunit beta OS=Momordica charantia OX=3673 GN=LOC111008395 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135
Identity = 257/275 (93.45%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPALASSIVRPPAPAVKFSNDTERL 60
           MALQ+KLDRFKKQQERCQTTLTGIAASK  STPKFTPA A+   RPPAPAVKFSNDTERL
Sbjct: 1   MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERL 60

Query: 61  QHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHY 120
           QHINSIRKSPVGAQIKRVIDLLLETR A TPEQIN+ACYVDINSNKAV+DSLRNNPKVHY
Sbjct: 61  QHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFDSLRNNPKVHY 120

Query: 121 DGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSN 180
           DGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDSYPTVMEDLQ LKASGQVWLLSN
Sbjct: 121 DGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSN 180

Query: 181 FDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240
           FDSQEDIAYPNDPRIQIKVDDDLK  FREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN
Sbjct: 181 FDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240

Query: 241 AQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           AQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 AQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 275

[Close]

BLAST of Lcy11g008280 vs. NCBI nr
Match: XP_011653191.1 (general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothetical protein Csa_014626 [Cucumis sativus])

HSP 1 Score: 502.3 bits (1292), Expect = 2.7e-138
Identity = 259/277 (93.50%), Postives = 267/277 (96.39%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
           MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTPA A+SI RPPAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Lcy11g008280 vs. NCBI nr
Match: XP_008452012.1 (PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_008452013.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >KAA0044840.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa] >TYK16624.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 498.8 bits (1283), Expect = 2.9e-137
Identity = 259/277 (93.50%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
           MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTPA A+SI RP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           ANAQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Lcy11g008280 vs. NCBI nr
Match: XP_022984812.1 (general transcription factor IIE subunit 2-like [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 256/276 (92.75%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPALASSIVRPPAPAVKFSNDTER 60
           MALQEKLDRFK+QQERCQTTL+GIAASK   +TP+FTPA A+S  RPPAPA+KFSNDTER
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAAS--RPPAPAIKFSNDTER 60

Query: 61  LQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVH 120
           LQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAV+DSLRNNPKVH
Sbjct: 61  LQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKVH 120

Query: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLS 180
           YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ LKASGQVWLLS
Sbjct: 121 YDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLS 180

Query: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
           NFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA
Sbjct: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240

Query: 241 NAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           NAQ+VASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 NAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of Lcy11g008280 vs. NCBI nr
Match: XP_038906431.1 (general transcription factor IIE subunit 2-like [Benincasa hispida])

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 258/277 (93.14%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIA----ASKSTPKFTPALASSIVRPPAPAVKFSNDTE 60
           MALQE+LDRFKKQQERCQTTL+GIA    ASKSTPKFTPA A+S  RPPAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQTTLSGIAAAKSASKSTPKFTPAPAAS--RPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQIN+ACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ LKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           ANAQHVASSK K KKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKLKKKKQEISKRTKLTNAHLPELFKN 275

[Close]

BLAST of Lcy11g008280 vs. NCBI nr
Match: XP_022136771.1 (general transcription factor IIE subunit 2-like [Momordica charantia])

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 257/275 (93.45%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPALASSIVRPPAPAVKFSNDTERL 60
           MALQ+KLDRFKKQQERCQTTLTGIAASK  STPKFTPA A+   RPPAPAVKFSNDTERL
Sbjct: 1   MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERL 60

Query: 61  QHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHY 120
           QHINSIRKSPVGAQIKRVIDLLLETR A TPEQIN+ACYVDINSNKAV+DSLRNNPKVHY
Sbjct: 61  QHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFDSLRNNPKVHY 120

Query: 121 DGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWLLSN 180
           DGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDSYPTVMEDLQ LKASGQVWLLSN
Sbjct: 121 DGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSN 180

Query: 181 FDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240
           FDSQEDIAYPNDPRIQIKVDDDLK  FREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN
Sbjct: 181 FDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRAN 240

Query: 241 AQHVASSKLKPKKKKQEISKRTKLTNAHLPELFKN 274
           AQHVASSK KPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 AQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 275

[Close]

BLAST of Lcy11g008280 vs. TAIR 10
Match: AT4G20330.1 (Transcription initiation factor TFIIE, beta subunit )

HSP 1 Score: 343.2 bits (879), Expect = 1.9e-94
Identity = 187/280 (66.79%), Postives = 230/280 (82.14%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPALASSIV--RPPAPAVKFSNDT 60
           MAL+E+LD+F KQQ +CQ+TL+ IA+S+   S+ +    L ++I   +P A  VKFS+DT
Sbjct: 1   MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDT 60

Query: 61  ERLQHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPK 120
           ERLQ+IN+IRK+PVGAQIKRVIDLL E R ALTPEQIN+ C+VD+++NKAV+DSLR NPK
Sbjct: 61  ERLQNINNIRKAPVGAQIKRVIDLLYERRLALTPEQINEWCHVDMHANKAVFDSLRKNPK 120

Query: 121 VHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQVWL 180
            HYDGRRFSYK+ HD+ DKNQLL L+RK+ +GIAV+DLKD+YP VMEDL+ L ASG ++L
Sbjct: 121 AHYDGRRFSYKATHDVNDKNQLLSLVRKYLDGIAVVDLKDAYPNVMEDLKALSASGDIYL 180

Query: 181 LSNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKR 240
           LSN  SQEDIAYPND + +IKVDD+ K  FR+I +P DMLDVEK+L K G+KPATNTA+R
Sbjct: 181 LSN--SQEDIAYPNDFKCEIKVDDEFKALFRDINIPNDMLDVEKELLKIGLKPATNTAER 240

Query: 241 RANAQ-HVASSKLK-PKKKKQEISKRTKLTNAHLPELFKN 274
           RA AQ H  S+K K  KKKKQEISKRTKLTNAHLPELF+N
Sbjct: 241 RAAAQTHGISNKPKDKKKKKQEISKRTKLTNAHLPELFQN 278

[Close]

BLAST of Lcy11g008280 vs. TAIR 10
Match: AT4G21010.1 (Transcription initiation factor TFIIE, beta subunit )

HSP 1 Score: 282.0 bits (720), Expect = 5.3e-76
Identity = 160/278 (57.55%), Postives = 213/278 (76.62%), Query Frame = 0


Query: 1   MALQEKLDRFKKQQERCQTTLTGIAASKS--TPKFTPALASSIVRPPAPAVKFSNDTERL 60
           MAL+E+LD+F KQQE+CQ+TL+ I++S++  +  + PA A++  +P     KFS +T++L
Sbjct: 1   MALREQLDKFNKQQEKCQSTLSSISSSRTALSRSYVPA-ATTSQKPNVFRGKFSENTKQL 60

Query: 61  QHINSIRKSPVGAQIKRVIDLLLETRQALTPEQINDACYVDINSNKAVYDSLRNNPKVHY 120
           QHI +IR S VGAQ+K VIDLL +TR A T EQIN+ACYVD+++NKAV+DSLR NPKVHY
Sbjct: 61  QHITNIRNSAVGAQMKIVIDLLFKTRLAYTAEQINEACYVDMHNNKAVFDSLRKNPKVHY 120

Query: 121 DGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQGLKASGQV-WLLS 180
           DGRRFSYK+ H++KDK QLL  + K  + I V DLKD+YP VMEDL+ LK+SG++ WLLS
Sbjct: 121 DGRRFSYKATHNIKDKKQLLSFVNKSDKVIDVSDLKDAYPNVMEDLKSLKSSGEIFWLLS 180

Query: 181 NFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRA 240
           N DS+E   Y N+     K+DD+LK  FR+I +P DML+VEK+L K G+KPATN A+RRA
Sbjct: 181 NTDSKEGTVYRNNMEYP-KIDDELKALFRDI-IPSDMLEVEKELLKIGLKPATNIAERRA 240

Query: 241 NAQ-HVASSKLK-PKKKKQEISKRTKLTNAHLPELFKN 274
             Q H  S+K K  KKKK+EI+ RTKLTN+H+ ELF++
Sbjct: 241 AEQLHGVSNKPKDKKKKKKEITNRTKLTNSHMLELFQS 275

The following BLAST results are available for this feature:

BLAST of Lcy11g008280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KJ8	8.6e-15	26.57	General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 ...	[more]
P79011	3.1e-12	29.27	Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (s...	[more]

BLAST of Lcy11g008280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWU5	1.3e-138	93.50	Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S3BS95	1.4e-137	93.50	Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7TNR4	1.4e-137	93.50	Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1J372	1.0e-135	92.75	Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1C4F9	1.3e-135	93.45	Transcription initiation factor IIE subunit beta OS=Momordica charantia OX=3673 ...	[more]

BLAST of Lcy11g008280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653191.1	2.7e-138	93.50	general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothe...	[more]
XP_008452012.1	2.9e-137	93.50	PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_00...	[more]
XP_022984812.1	2.1e-135	92.75	general transcription factor IIE subunit 2-like [Cucurbita maxima]	[more]
XP_038906431.1	2.8e-135	93.14	general transcription factor IIE subunit 2-like [Benincasa hispida]	[more]
XP_022136771.1	2.8e-135	93.45	general transcription factor IIE subunit 2-like [Momordica charantia]	[more]

BLAST of Lcy11g008280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20330.1	1.9e-94	66.79	Transcription initiation factor TFIIE, beta subunit	[more]
AT4G21010.1	5.3e-76	57.55	Transcription initiation factor TFIIE, beta subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003166	Transcription factor TFIIE beta subunit, DNA-binding domain	PFAM	PF02186	TFIIE_beta	coord: 71..130 e-value: 2.4E-10 score: 40.5
IPR003166	Transcription factor TFIIE beta subunit, DNA-binding domain	PROSITE	PS51351	TFIIE_BETA_C	coord: 57..132 score: 11.606009
IPR040501	TFA2, Winged helix domain 2	PFAM	PF18121	TFA2_Winged_2	coord: 132..189 e-value: 3.8E-14 score: 52.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..273
None	No IPR available	PANTHER	PTHR12716:SF13	BNAA02G21830D PROTEIN	coord: 1..273
IPR016656	Transcription initiation factor TFIIE, beta subunit	PANTHER	PTHR12716	TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT	coord: 1..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g008280.1	Lcy11g008280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005673	transcription factor TFIIE complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003743	translation initiation factor activity