Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAATTCTCTCAGCCTCTCAATCCACTAGAGCAAAGCAATAGTGGGCAATGGGCATGAATGTTTAGCGTCAAATATCCTGTTGGCTGTTGCTCTGTAGCCCGTCGTCCCGTGTCCACCACGCACAGATGGGAACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAACTCCATTCTTCCACTCTTCATCTGCCACCACTCCCAGATTGTCTCATCCAGCTAGAACTTCACTCGGGTTTTCTTCATCCAGGCGCATCAGCTTCCTCTCTTCCTCTTCCTCTTCTTCTTCAGCTTCTGTTGTAGAAGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGTCTGAATCAGAATCAGACCCAGATGATTCTTCCTTCAGGTATTGATGATAATCATCCTTCTTCTCTCTATTTGCAATTGACTCTGATGATAGAAGGGTTGGATTATGGAAACTTTAATTCCATGGTGGTTGTGTGTTCGTTTCTTTAATTGAATGTCTGTTTTCTACTTGGGGGTAAGTGGATTGAGAGAAGTATAGCATTGGCCTCTTGAAATTTGGATTGGATTACTCAAAATTTCTCTAGATGCTGAAGGATGGAGGAGCTCTAGCATTTGGTAAATATAAGAGAGGGTGAAAATCCTAGTTGATGACTATTGCTCTAGTTCAGGAATATATTTGAACATCACCAAGACAAACTGTTTTACCCCACAAAATTCGATTATCATTCAGGAAACTTCATTTAAATTTTTTGTTTGCCCCTTGACCACCCATGTATGCTCATGCTCTAGTTGAGGAGTTATATATGTCCTTCCTTTGAAAAAGAGGGGAAACATGGGCCAATTTTCCTTGCTCCTTCTAGCAACTAGTTAAACAAACAAGATGTAGGAGGAACAAAATTCTATTGGGAATTGGTGTAATTAGCTGAAAACTAGTTGGCGCAGCACAAGACTTGGCTCAGCAGTGAAAATCATTAGCACCCCATACGGAGTTGAATGTTTCCCCATTTTTCTTGTTCTTCTGCTCGTACATATTTGAAGGTATTTCAGTGTGTAAGTGATATGAATTTAATCAGCCCATAATGCAGAGTGCAAACTAGTTGAAAGGTTCATTTCAAACCACATCTGGGGTCTCTTGAAACCATCAATTTTAGATGTATGTTGTCAATTCATTTTCACTTAGTATGTTATCATCTGAGTTCTGCCTGCCTTCATTTATAACGATGATGGTGCCAACGACCTGGCTTAGAACGATTTTATTTTCTTTTTCATTTCTTATAAACAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTTCCAGGTTTTGGTTGGTGGCCAATAAAGGCGTACAGGCCTTGTCCTGGATTCGTAGCATCTGGTGGCAGATACAAGAGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCGAGGACCAAAGCCTCTGCCGGGGCTGGCAGAAAGGACTCGTCGAGGTACAAGCCACAAACCCTTTTTTCTTGTGAAGTACATTCTTATGTTTATAGCTTCGGAACTTGTAATATTACAACCTAACCAAACCAAATGCTTGAAACCAATTTAGTGAACTTGCTCACACTATAGGAATAAAAATAGCTGGCACAAGGTTTTTCATTTGTTAGTCTGTGTTAACCGTACAAACACGTGCTGATCTCATCATTATTATTAGGCTAAACCTGTTCAGTTTATGTCACTCTGGTGAACATAGCTTACCCCATCTTTCTTTGACTGGGAGAGATGAAAGGATTATCTCACTATCTGAACATTGTTTGGTTGTGACTTGTGAGAGCATTTAGCATAAAATTTCATTTGAATTACTGCTACCATCTGCATACACCTCGGTTTTCTGTACTCATGAATCGGCTGCCAAGTATGCGGTAGGCCTCTGATAGTGAAAACATATGCGAGGCAAAAAAACAGGTAAGAATGCATAATGAGTTAGAGGAGAGGGAATATAATTGCCTGTTATGTGCAGTGAGCCTTAGGCAACCATGTGTAGTACAGTAGGAGAGCAAGGCCATCTCAAACAGCCACGACGCTTTCATCATCGGTTTCTGGGTTGTCGATAAAAGTGTCTCTTGTTAGCTTCATTTTGATCTGCTTGTTCTTATCAGCCTGATAGTGAAAGAAGGTAGCTATTAGGATTAGCCATTAAAGGGTGAAATCACATGAAATGGTACACTTTACATAATGTAATGTGACCAAGCTTCATGTATTCATTCATTGTGGTTTAGGATTTTCCCTGTTGTTTTTCTTGAATTTCCGTCATATTTTACTTTGACTTTCTAACTTTTAATGACCCCGATTCATTCGTTTCGCGTTATGTCCTTTCGTCCAGCAAGAAAAAGTCGGCTAAAGGGTAACTTAGCCAGGCTTACCATCCACAAGTTGATAAACACACAAGAGAGGAAATGAAGGAGGATGCAGAATAGTTTATATGCAAATACCAAATGTGAAAGGGGTGAGGATTGAACAATTCACTTGGCTTCTCATTTTTCTAGCACGTCAAAAATTTCTCATAGGGATTTTGATTGAAATTTGGCTAGATTCTCATTTCTTTAGGCTTCTGTAATGATACCAACAAGCTCGTATTAGACGGGGCCAACGTTTAAACGCACAGAAAATTTTCAAGTCAATGCTTTGTCTGAGGCTTATCAAGATTCATTCTTTGCAGAACTTTGTTTCTTTTCCAGTTGCAAATGAGATGCCATGTTTGTTCTTCAATGGCTGCTTCTCCCAGGAACATTTAACAAAAGCAATTTGATTTTTTAATAAAAATTGTAAATTAAATCAATATGAGGCATACGCCTTAATTTAGATAAAAAGAATGACCCAACTCAATTTTTTATTTTCTTAAATAAAGATTTTTTATTATCATTCTG
mRNA sequence
GGAATTCTCTCAGCCTCTCAATCCACTAGAGCAAAGCAATAGTGGGCAATGGGCATGAATGTTTAGCGTCAAATATCCTGTTGGCTGTTGCTCTGTAGCCCGTCGTCCCGTGTCCACCACGCACAGATGGGAACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAACTCCATTCTTCCACTCTTCATCTGCCACCACTCCCAGATTGTCTCATCCAGCTAGAACTTCACTCGGGTTTTCTTCATCCAGGCGCATCAGCTTCCTCTCTTCCTCTTCCTCTTCTTCTTCAGCTTCTGTTGTAGAAGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGTCTGAATCAGAATCAGACCCAGATGATTCTTCCTTCAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTTCCAGGTTTTGGTTGGTGGCCAATAAAGGCGTACAGGCCTTGTCCTGGATTCGTAGCATCTGGTGGCAGATACAAGAGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCGAGGACCAAAGCCTCTGCCGGGGCTGGCAGAAAGGACTCGTCGAGGTACAAGCCACAAACCCTTTTTTCTTGTGAAGTACATTCTTATGTTTATAGCTTCGGAACTTGTAATATTACAACCTAACCAAACCAAATGCTTGAAACCAATTTAGTGAACTTGCTCACACTATAGGAATAAAAATAGCTGGCACAAGGTTTTTCATTTGTTAGTCTGTGTTAACCGTACAAACACGTGCTGATCTCATCATTATTATTAGGCTAAACCTGTTCAGTTTATGTCACTCTGGTGAACATAGCTTACCCCATCTTTCTTTGACTGGGAGAGATGAAAGGATTATCTCACTATCTGAACATTGTTTGGTTGTGACTTGTGAGAGCATTTAGCATAAAATTTCATTTGAATTACTGCTACCATCTGCATACACCTCGGTTTTCTGTACTCATGAATCGGCTGCCAAGTATGCGGTAGGCCTCTGATAGTGAAAACATATGCGAGGCAAAAAAACAGGTAAGAATGCATAATGAGTTAGAGGAGAGGGAATATAATTGCCTGTTATGTGCAGTGAGCCTTAGGCAACCATGTGTAGTACAGTAGGAGAGCAAGGCCATCTCAAACAGCCACGACGCTTTCATCATCGGTTTCTGGGTTGTCGATAAAAGTGTCTCTTGTTAGCTTCATTTTGATCTGCTTGTTCTTATCAGCCTGATAGTGAAAGAAGGTAGCTATTAGGATTAGCCATTAAAGGGTGAAATCACATGAAATGGTACACTTTACATAATGTAATGTGACCAAGCTTCATGTATTCATTCATTGTGGTTTAGGATTTTCCCTGTTGTTTTTCTTGAATTTCCGTCATATTTTACTTTGACTTTCTAACTTTTAATGACCCCGATTCATTCGTTTCGCGTTATGTCCTTTCGTCCAGCAAGAAAAAGTCGGCTAAAGGGTAACTTAGCCAGGCTTACCATCCACAAGTTGATAAACACACAAGAGAGGAAATGAAGGAGGATGCAGAATAGTTTATATGCAAATACCAAATGTGAAAGGGGTGAGGATTGAACAATTCACTTGGCTTCTCATTTTTCTAGCACGTCAAAAATTTCTCATAGGGATTTTGATTGAAATTTGGCTAGATTCTCATTTCTTTAGGCTTCTGTAATGATACCAACAAGCTCGTATTAGACGGGGCCAACGTTTAAACGCACAGAAAATTTTCAAGTCAATGCTTTGTCTGAGGCTTATCAAGATTCATTCTTTGCAGAACTTTGTTTCTTTTCCAGTTGCAAATGAGATGCCATGTTTGTTCTTCAATGGCTGCTTCTCCCAGGAACATTTAACAAAAGCAATTTGATTTTTTAATAAAAATTGTAAATTAAATCAATATGAGGCATACGCCTTAATTTAGATAAAAAGAATGACCCAACTCAATTTTTTATTTTCTTAAATAAAGATTTTTTATTATCATTCTG
Coding sequence (CDS)
ATGGGAACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAACTCCATTCTTCCACTCTTCATCTGCCACCACTCCCAGATTGTCTCATCCAGCTAGAACTTCACTCGGGTTTTCTTCATCCAGGCGCATCAGCTTCCTCTCTTCCTCTTCCTCTTCTTCTTCAGCTTCTGTTGTAGAAGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGTCTGAATCAGAATCAGACCCAGATGATTCTTCCTTCAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTTCCAGGTTTTGGTTGGTGGCCAATAAAGGCGTACAGGCCTTGTCCTGGATTCGTAGCATCTGGTGGCAGATACAAGAGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCGAGGACCAAAGCCTCTGCCGGGGCTGGCAGAAAGGACTCGTCGAGGTACAAGCCACAAACCCTTTTTTCTTGTGAAGTACATTCTTATGTTTATAGCTTCGGAACTTGTAATATTACAACCTAA
Protein sequence
MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEEETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYKPQTLFSCEVHSYVYSFGTCNITT
Homology
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match:
A0A6J1J5I4 (uncharacterized protein LOC111481538 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481538 PE=4 SV=1)
HSP 1 Score: 270.0 bits (689), Expect = 7.6e-69
Identity = 147/167 (88.02%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAPQR PFFHSS AT+PR SH RTSL FSSSR +SFL SSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
ETNSSPPD+LSLQ SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61 ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSSR
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSR 163
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match:
A0A6J1J0C4 (uncharacterized protein LOC111481538 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481538 PE=4 SV=1)
HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 147/169 (86.98%), Postives = 153/169 (90.53%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAPQR PFFHSS AT+PR SH RTSL FSSSR +SFL SSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
ETNSSPPD+LSLQ SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61 ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYK 170
IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSS K
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSSKK 165
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match:
A0A6J1FN06 (uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC111447296 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 4.9e-68
Identity = 146/168 (86.90%), Postives = 154/168 (91.67%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFL-SSSSSSSSASVVE 60
MG+ALLSVPAPQR PFFHSS ATTPRLSH TSL FSSSR +SFL SSSSSSSS+SVV+
Sbjct: 1 MGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
Query: 61 EETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWW 120
EETNSSPPD+LSLQ SESDPD SSFRGCKACG+EEIERGCNGEGRIQGGIATVPGFGWW
Sbjct: 61 EETNSSPPDDLSLQ--SESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWW 120
Query: 121 PIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
PIKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA AG+KDS R
Sbjct: 121 PIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSLR 166
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match:
A0A6J1C7J9 (uncharacterized protein LOC111008142 OS=Momordica charantia OX=3673 GN=LOC111008142 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67
Identity = 142/165 (86.06%), Postives = 150/165 (90.91%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAP+ TPFFH S TTPR ++ + TSLGFSSSRRISFLSSSSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
+TNSSPPDELSLQ SESDPDDSSFRGCKACG+EEIERGCN EGRIQGGIATVPGFGWWP
Sbjct: 61 QTNSSPPDELSLQ--SESDPDDSSFRGCKACGKEEIERGCNEEGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDS 166
IKAYRPCPGFVASGGRYKRRGQSMDEV SGG RT AS GA RK+S
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASVGARRKNS 163
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match:
A0A5D3D003 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003600 PE=4 SV=1)
HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 139/177 (78.53%), Postives = 146/177 (82.49%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPAR--TSLGFSSSRRISFLSSSSSSSSASVV 60
MGTALLSVPA PFFHS SH +R TSL FSSSR +FLSSSSSSSSASVV
Sbjct: 1 MGTALLSVPA----PFFHS--------SHRSRFTTSLPFSSSRPTTFLSSSSSSSSASVV 60
Query: 61 EEETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGW 120
+EE NSS PD+LSLQ SESDPDDSSF GCKACG+EEIERGCNGEGRIQGGIATVPGFGW
Sbjct: 61 DEEINSSSPDQLSLQ--SESDPDDSSFGGCKACGKEEIERGCNGEGRIQGGIATVPGFGW 120
Query: 121 WPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYKPQTLFS 176
WPIKAYRPCPGFVASGGRYKR GQSMDEVTSGG RT+ASA RKDSSRY P+ FS
Sbjct: 121 WPIKAYRPCPGFVASGGRYKRHGQSMDEVTSGGGRTEASASVSRKDSSRYNPEIPFS 163
BLAST of Lcy11g007650 vs. NCBI nr
Match:
KAG7031146.1 (hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70
Identity = 150/175 (85.71%), Postives = 158/175 (90.29%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFL-SSSSSSSSASVVE 60
MG+ALLSVPAPQR PFFHSS ATTPRLSH RTSL FSSSR +SFL SSSSSSSS+SVV+
Sbjct: 1 MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
Query: 61 EETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWW 120
EETNSSPPD+LSLQ SESDPD SSFRGCKACG+EEIERGCNGEGRIQGGIATVPGFGWW
Sbjct: 61 EETNSSPPDDLSLQ--SESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWW 120
Query: 121 PIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYKPQTLF 175
PIKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA G+KDS RYKP F
Sbjct: 121 PIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLRYKPYIPF 173
BLAST of Lcy11g007650 vs. NCBI nr
Match:
XP_022982784.1 (uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima])
HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 147/167 (88.02%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAPQR PFFHSS AT+PR SH RTSL FSSSR +SFL SSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
ETNSSPPD+LSLQ SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61 ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSSR
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSR 163
BLAST of Lcy11g007650 vs. NCBI nr
Match:
XP_023527851.1 (uncharacterized protein LOC111790947 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAPQR PFFHSS ATT RLSH RTSL FSSSR +SFL SSSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFL-SSSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
ETNSSPPD+LSLQ SESDPD SSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61 ETNSSPPDDLSLQ--SESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
IKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA AG+KDSSR
Sbjct: 121 IKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR 164
BLAST of Lcy11g007650 vs. NCBI nr
Match:
XP_022982791.1 (uncharacterized protein LOC111481538 isoform X2 [Cucurbita maxima])
HSP 1 Score: 268.9 bits (686), Expect = 3.5e-68
Identity = 147/169 (86.98%), Postives = 153/169 (90.53%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAPQR PFFHSS AT+PR SH RTSL FSSSR +SFL SSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
ETNSSPPD+LSLQ SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61 ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYK 170
IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSS K
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSSKK 165
BLAST of Lcy11g007650 vs. NCBI nr
Match:
XP_023527861.1 (uncharacterized protein LOC111790947 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0
Query: 1 MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
MGTALLSVPAPQR PFFHSS ATT RLSH RTSL FSSSR +SFL SSSSSSSASVV+E
Sbjct: 1 MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFL-SSSSSSSASVVDE 60
Query: 61 ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
ETNSSPPD+LSLQ SESDPD SSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61 ETNSSPPDDLSLQ--SESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWP 120
Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYK 170
IKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA AG+KDSS K
Sbjct: 121 IKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSSKK 166
BLAST of Lcy11g007650 vs. TAIR 10
Match:
AT5G42070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 126.7 bits (317), Expect = 2.0e-29
Identity = 68/121 (56.20%), Postives = 81/121 (66.94%), Query Frame = 0
Query: 52 SSSASVVEEETNSSPPDELSLQSESES-------DPDDSSFRGCKACGREEIERGCNGEG 111
SSS+ + + + P LSL S S D +D +F GC+ACG+EE E GCNG+G
Sbjct: 28 SSSSFFLNKSSKHHPHPLLSLSSSPSSVVETDNDDDNDLTFSGCRACGKEEKESGCNGDG 87
Query: 112 RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKD 166
RIQGGIATVPGFGWWPIKAYRPCP FV +GGRY+R GQSMDEV G +K+S D
Sbjct: 88 RIQGGIATVPGFGWWPIKAYRPCPAFVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSD 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1J5I4 | 7.6e-69 | 88.02 | uncharacterized protein LOC111481538 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1J0C4 | 1.7e-68 | 86.98 | uncharacterized protein LOC111481538 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1FN06 | 4.9e-68 | 86.90 | uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC1114472... | [more] |
A0A6J1C7J9 | 2.4e-67 | 86.06 | uncharacterized protein LOC111008142 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A5D3D003 | 1.3e-60 | 78.53 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAG7031146.1 | 2.2e-70 | 85.71 | hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022982784.1 | 1.6e-68 | 88.02 | uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima] | [more] |
XP_023527851.1 | 2.0e-68 | 88.02 | uncharacterized protein LOC111790947 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022982791.1 | 3.5e-68 | 86.98 | uncharacterized protein LOC111481538 isoform X2 [Cucurbita maxima] | [more] |
XP_023527861.1 | 4.5e-68 | 86.98 | uncharacterized protein LOC111790947 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT5G42070.1 | 2.0e-29 | 56.20 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |