Lcy11g007650 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g007650
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr11: 7895394 .. 7898347 (-)
RNA-Seq ExpressionLcy11g007650
SyntenyLcy11g007650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAATTCTCTCAGCCTCTCAATCCACTAGAGCAAAGCAATAGTGGGCAATGGGCATGAATGTTTAGCGTCAAATATCCTGTTGGCTGTTGCTCTGTAGCCCGTCGTCCCGTGTCCACCACGCACAGATGGGAACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAACTCCATTCTTCCACTCTTCATCTGCCACCACTCCCAGATTGTCTCATCCAGCTAGAACTTCACTCGGGTTTTCTTCATCCAGGCGCATCAGCTTCCTCTCTTCCTCTTCCTCTTCTTCTTCAGCTTCTGTTGTAGAAGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGTCTGAATCAGAATCAGACCCAGATGATTCTTCCTTCAGGTATTGATGATAATCATCCTTCTTCTCTCTATTTGCAATTGACTCTGATGATAGAAGGGTTGGATTATGGAAACTTTAATTCCATGGTGGTTGTGTGTTCGTTTCTTTAATTGAATGTCTGTTTTCTACTTGGGGGTAAGTGGATTGAGAGAAGTATAGCATTGGCCTCTTGAAATTTGGATTGGATTACTCAAAATTTCTCTAGATGCTGAAGGATGGAGGAGCTCTAGCATTTGGTAAATATAAGAGAGGGTGAAAATCCTAGTTGATGACTATTGCTCTAGTTCAGGAATATATTTGAACATCACCAAGACAAACTGTTTTACCCCACAAAATTCGATTATCATTCAGGAAACTTCATTTAAATTTTTTGTTTGCCCCTTGACCACCCATGTATGCTCATGCTCTAGTTGAGGAGTTATATATGTCCTTCCTTTGAAAAAGAGGGGAAACATGGGCCAATTTTCCTTGCTCCTTCTAGCAACTAGTTAAACAAACAAGATGTAGGAGGAACAAAATTCTATTGGGAATTGGTGTAATTAGCTGAAAACTAGTTGGCGCAGCACAAGACTTGGCTCAGCAGTGAAAATCATTAGCACCCCATACGGAGTTGAATGTTTCCCCATTTTTCTTGTTCTTCTGCTCGTACATATTTGAAGGTATTTCAGTGTGTAAGTGATATGAATTTAATCAGCCCATAATGCAGAGTGCAAACTAGTTGAAAGGTTCATTTCAAACCACATCTGGGGTCTCTTGAAACCATCAATTTTAGATGTATGTTGTCAATTCATTTTCACTTAGTATGTTATCATCTGAGTTCTGCCTGCCTTCATTTATAACGATGATGGTGCCAACGACCTGGCTTAGAACGATTTTATTTTCTTTTTCATTTCTTATAAACAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTTCCAGGTTTTGGTTGGTGGCCAATAAAGGCGTACAGGCCTTGTCCTGGATTCGTAGCATCTGGTGGCAGATACAAGAGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCGAGGACCAAAGCCTCTGCCGGGGCTGGCAGAAAGGACTCGTCGAGGTACAAGCCACAAACCCTTTTTTCTTGTGAAGTACATTCTTATGTTTATAGCTTCGGAACTTGTAATATTACAACCTAACCAAACCAAATGCTTGAAACCAATTTAGTGAACTTGCTCACACTATAGGAATAAAAATAGCTGGCACAAGGTTTTTCATTTGTTAGTCTGTGTTAACCGTACAAACACGTGCTGATCTCATCATTATTATTAGGCTAAACCTGTTCAGTTTATGTCACTCTGGTGAACATAGCTTACCCCATCTTTCTTTGACTGGGAGAGATGAAAGGATTATCTCACTATCTGAACATTGTTTGGTTGTGACTTGTGAGAGCATTTAGCATAAAATTTCATTTGAATTACTGCTACCATCTGCATACACCTCGGTTTTCTGTACTCATGAATCGGCTGCCAAGTATGCGGTAGGCCTCTGATAGTGAAAACATATGCGAGGCAAAAAAACAGGTAAGAATGCATAATGAGTTAGAGGAGAGGGAATATAATTGCCTGTTATGTGCAGTGAGCCTTAGGCAACCATGTGTAGTACAGTAGGAGAGCAAGGCCATCTCAAACAGCCACGACGCTTTCATCATCGGTTTCTGGGTTGTCGATAAAAGTGTCTCTTGTTAGCTTCATTTTGATCTGCTTGTTCTTATCAGCCTGATAGTGAAAGAAGGTAGCTATTAGGATTAGCCATTAAAGGGTGAAATCACATGAAATGGTACACTTTACATAATGTAATGTGACCAAGCTTCATGTATTCATTCATTGTGGTTTAGGATTTTCCCTGTTGTTTTTCTTGAATTTCCGTCATATTTTACTTTGACTTTCTAACTTTTAATGACCCCGATTCATTCGTTTCGCGTTATGTCCTTTCGTCCAGCAAGAAAAAGTCGGCTAAAGGGTAACTTAGCCAGGCTTACCATCCACAAGTTGATAAACACACAAGAGAGGAAATGAAGGAGGATGCAGAATAGTTTATATGCAAATACCAAATGTGAAAGGGGTGAGGATTGAACAATTCACTTGGCTTCTCATTTTTCTAGCACGTCAAAAATTTCTCATAGGGATTTTGATTGAAATTTGGCTAGATTCTCATTTCTTTAGGCTTCTGTAATGATACCAACAAGCTCGTATTAGACGGGGCCAACGTTTAAACGCACAGAAAATTTTCAAGTCAATGCTTTGTCTGAGGCTTATCAAGATTCATTCTTTGCAGAACTTTGTTTCTTTTCCAGTTGCAAATGAGATGCCATGTTTGTTCTTCAATGGCTGCTTCTCCCAGGAACATTTAACAAAAGCAATTTGATTTTTTAATAAAAATTGTAAATTAAATCAATATGAGGCATACGCCTTAATTTAGATAAAAAGAATGACCCAACTCAATTTTTTATTTTCTTAAATAAAGATTTTTTATTATCATTCTG

mRNA sequence

GGAATTCTCTCAGCCTCTCAATCCACTAGAGCAAAGCAATAGTGGGCAATGGGCATGAATGTTTAGCGTCAAATATCCTGTTGGCTGTTGCTCTGTAGCCCGTCGTCCCGTGTCCACCACGCACAGATGGGAACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAACTCCATTCTTCCACTCTTCATCTGCCACCACTCCCAGATTGTCTCATCCAGCTAGAACTTCACTCGGGTTTTCTTCATCCAGGCGCATCAGCTTCCTCTCTTCCTCTTCCTCTTCTTCTTCAGCTTCTGTTGTAGAAGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGTCTGAATCAGAATCAGACCCAGATGATTCTTCCTTCAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTTCCAGGTTTTGGTTGGTGGCCAATAAAGGCGTACAGGCCTTGTCCTGGATTCGTAGCATCTGGTGGCAGATACAAGAGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCGAGGACCAAAGCCTCTGCCGGGGCTGGCAGAAAGGACTCGTCGAGGTACAAGCCACAAACCCTTTTTTCTTGTGAAGTACATTCTTATGTTTATAGCTTCGGAACTTGTAATATTACAACCTAACCAAACCAAATGCTTGAAACCAATTTAGTGAACTTGCTCACACTATAGGAATAAAAATAGCTGGCACAAGGTTTTTCATTTGTTAGTCTGTGTTAACCGTACAAACACGTGCTGATCTCATCATTATTATTAGGCTAAACCTGTTCAGTTTATGTCACTCTGGTGAACATAGCTTACCCCATCTTTCTTTGACTGGGAGAGATGAAAGGATTATCTCACTATCTGAACATTGTTTGGTTGTGACTTGTGAGAGCATTTAGCATAAAATTTCATTTGAATTACTGCTACCATCTGCATACACCTCGGTTTTCTGTACTCATGAATCGGCTGCCAAGTATGCGGTAGGCCTCTGATAGTGAAAACATATGCGAGGCAAAAAAACAGGTAAGAATGCATAATGAGTTAGAGGAGAGGGAATATAATTGCCTGTTATGTGCAGTGAGCCTTAGGCAACCATGTGTAGTACAGTAGGAGAGCAAGGCCATCTCAAACAGCCACGACGCTTTCATCATCGGTTTCTGGGTTGTCGATAAAAGTGTCTCTTGTTAGCTTCATTTTGATCTGCTTGTTCTTATCAGCCTGATAGTGAAAGAAGGTAGCTATTAGGATTAGCCATTAAAGGGTGAAATCACATGAAATGGTACACTTTACATAATGTAATGTGACCAAGCTTCATGTATTCATTCATTGTGGTTTAGGATTTTCCCTGTTGTTTTTCTTGAATTTCCGTCATATTTTACTTTGACTTTCTAACTTTTAATGACCCCGATTCATTCGTTTCGCGTTATGTCCTTTCGTCCAGCAAGAAAAAGTCGGCTAAAGGGTAACTTAGCCAGGCTTACCATCCACAAGTTGATAAACACACAAGAGAGGAAATGAAGGAGGATGCAGAATAGTTTATATGCAAATACCAAATGTGAAAGGGGTGAGGATTGAACAATTCACTTGGCTTCTCATTTTTCTAGCACGTCAAAAATTTCTCATAGGGATTTTGATTGAAATTTGGCTAGATTCTCATTTCTTTAGGCTTCTGTAATGATACCAACAAGCTCGTATTAGACGGGGCCAACGTTTAAACGCACAGAAAATTTTCAAGTCAATGCTTTGTCTGAGGCTTATCAAGATTCATTCTTTGCAGAACTTTGTTTCTTTTCCAGTTGCAAATGAGATGCCATGTTTGTTCTTCAATGGCTGCTTCTCCCAGGAACATTTAACAAAAGCAATTTGATTTTTTAATAAAAATTGTAAATTAAATCAATATGAGGCATACGCCTTAATTTAGATAAAAAGAATGACCCAACTCAATTTTTTATTTTCTTAAATAAAGATTTTTTATTATCATTCTG

Coding sequence (CDS)

ATGGGAACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAACTCCATTCTTCCACTCTTCATCTGCCACCACTCCCAGATTGTCTCATCCAGCTAGAACTTCACTCGGGTTTTCTTCATCCAGGCGCATCAGCTTCCTCTCTTCCTCTTCCTCTTCTTCTTCAGCTTCTGTTGTAGAAGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGTCTGAATCAGAATCAGACCCAGATGATTCTTCCTTCAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTTCCAGGTTTTGGTTGGTGGCCAATAAAGGCGTACAGGCCTTGTCCTGGATTCGTAGCATCTGGTGGCAGATACAAGAGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCGAGGACCAAAGCCTCTGCCGGGGCTGGCAGAAAGGACTCGTCGAGGTACAAGCCACAAACCCTTTTTTCTTGTGAAGTACATTCTTATGTTTATAGCTTCGGAACTTGTAATATTACAACCTAA

Protein sequence

MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEEETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYKPQTLFSCEVHSYVYSFGTCNITT
Homology
[Close]
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match: A0A6J1J5I4 (uncharacterized protein LOC111481538 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481538 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.6e-69
Identity = 147/167 (88.02%), Postives = 153/167 (91.62%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAPQR PFFHSS AT+PR SH  RTSL FSSSR +SFL  SSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           ETNSSPPD+LSLQ  SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
           IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSSR
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSR 163

[Close]
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match: A0A6J1J0C4 (uncharacterized protein LOC111481538 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481538 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 147/169 (86.98%), Postives = 153/169 (90.53%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAPQR PFFHSS AT+PR SH  RTSL FSSSR +SFL  SSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           ETNSSPPD+LSLQ  SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYK 170
           IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSS  K
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSSKK 165

[Close]
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match: A0A6J1FN06 (uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC111447296 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.9e-68
Identity = 146/168 (86.90%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFL-SSSSSSSSASVVE 60
           MG+ALLSVPAPQR PFFHSS ATTPRLSH   TSL FSSSR +SFL SSSSSSSS+SVV+
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWW 120
           EETNSSPPD+LSLQ  SESDPD SSFRGCKACG+EEIERGCNGEGRIQGGIATVPGFGWW
Sbjct: 61  EETNSSPPDDLSLQ--SESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWW 120

Query: 121 PIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
           PIKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA AG+KDS R
Sbjct: 121 PIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSLR 166

[Close]
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match: A0A6J1C7J9 (uncharacterized protein LOC111008142 OS=Momordica charantia OX=3673 GN=LOC111008142 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67
Identity = 142/165 (86.06%), Postives = 150/165 (90.91%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAP+ TPFFH S  TTPR ++ + TSLGFSSSRRISFLSSSSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           +TNSSPPDELSLQ  SESDPDDSSFRGCKACG+EEIERGCN EGRIQGGIATVPGFGWWP
Sbjct: 61  QTNSSPPDELSLQ--SESDPDDSSFRGCKACGKEEIERGCNEEGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDS 166
           IKAYRPCPGFVASGGRYKRRGQSMDEV SGG RT AS GA RK+S
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASVGARRKNS 163

[Close]
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match: A0A5D3D003 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003600 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 139/177 (78.53%), Postives = 146/177 (82.49%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPAR--TSLGFSSSRRISFLSSSSSSSSASVV 60
           MGTALLSVPA    PFFHS        SH +R  TSL FSSSR  +FLSSSSSSSSASVV
Sbjct: 1   MGTALLSVPA----PFFHS--------SHRSRFTTSLPFSSSRPTTFLSSSSSSSSASVV 60

Query: 61  EEETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGW 120
           +EE NSS PD+LSLQ  SESDPDDSSF GCKACG+EEIERGCNGEGRIQGGIATVPGFGW
Sbjct: 61  DEEINSSSPDQLSLQ--SESDPDDSSFGGCKACGKEEIERGCNGEGRIQGGIATVPGFGW 120

Query: 121 WPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYKPQTLFS 176
           WPIKAYRPCPGFVASGGRYKR GQSMDEVTSGG RT+ASA   RKDSSRY P+  FS
Sbjct: 121 WPIKAYRPCPGFVASGGRYKRHGQSMDEVTSGGGRTEASASVSRKDSSRYNPEIPFS 163

[Close]
BLAST of Lcy11g007650 vs. NCBI nr
Match: KAG7031146.1 (hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70
Identity = 150/175 (85.71%), Postives = 158/175 (90.29%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFL-SSSSSSSSASVVE 60
           MG+ALLSVPAPQR PFFHSS ATTPRLSH  RTSL FSSSR +SFL SSSSSSSS+SVV+
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWW 120
           EETNSSPPD+LSLQ  SESDPD SSFRGCKACG+EEIERGCNGEGRIQGGIATVPGFGWW
Sbjct: 61  EETNSSPPDDLSLQ--SESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWW 120

Query: 121 PIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYKPQTLF 175
           PIKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA  G+KDS RYKP   F
Sbjct: 121 PIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLRYKPYIPF 173

[Close]
BLAST of Lcy11g007650 vs. NCBI nr
Match: XP_022982784.1 (uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 147/167 (88.02%), Postives = 153/167 (91.62%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAPQR PFFHSS AT+PR SH  RTSL FSSSR +SFL  SSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           ETNSSPPD+LSLQ  SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
           IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSSR
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSR 163

[Close]
BLAST of Lcy11g007650 vs. NCBI nr
Match: XP_023527851.1 (uncharacterized protein LOC111790947 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAPQR PFFHSS ATT RLSH  RTSL FSSSR +SFL SSSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFL-SSSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           ETNSSPPD+LSLQ  SESDPD SSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  ETNSSPPDDLSLQ--SESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSR 168
           IKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA AG+KDSSR
Sbjct: 121 IKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR 164

[Close]
BLAST of Lcy11g007650 vs. NCBI nr
Match: XP_022982791.1 (uncharacterized protein LOC111481538 isoform X2 [Cucurbita maxima])

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-68
Identity = 147/169 (86.98%), Postives = 153/169 (90.53%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAPQR PFFHSS AT+PR SH  RTSL FSSSR +SFL  SSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFL--SSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           ETNSSPPD+LSLQ  SESDPD SSFRGCKACGREEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  ETNSSPPDDLSLQ--SESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYK 170
           IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR +ASA AGRKDSS  K
Sbjct: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSSKK 165

[Close]
BLAST of Lcy11g007650 vs. NCBI nr
Match: XP_023527861.1 (uncharacterized protein LOC111790947 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0 

Query: 1   MGTALLSVPAPQRTPFFHSSSATTPRLSHPARTSLGFSSSRRISFLSSSSSSSSASVVEE 60
           MGTALLSVPAPQR PFFHSS ATT RLSH  RTSL FSSSR +SFL SSSSSSSASVV+E
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFL-SSSSSSSASVVDE 60

Query: 61  ETNSSPPDELSLQSESESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
           ETNSSPPD+LSLQ  SESDPD SSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  ETNSSPPDDLSLQ--SESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKDSSRYK 170
           IKAYRPCP FVASGGRYKRRGQSMDEVTSGGART+ASA AG+KDSS  K
Sbjct: 121 IKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSSKK 166

[Close]
BLAST of Lcy11g007650 vs. TAIR 10
Match: AT5G42070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-29
Identity = 68/121 (56.20%), Postives = 81/121 (66.94%), Query Frame = 0 

Query: 52  SSSASVVEEETNSSPPDELSLQSESES-------DPDDSSFRGCKACGREEIERGCNGEG 111
           SSS+  + + +   P   LSL S   S       D +D +F GC+ACG+EE E GCNG+G
Sbjct: 28  SSSSFFLNKSSKHHPHPLLSLSSSPSSVVETDNDDDNDLTFSGCRACGKEEKESGCNGDG 87

Query: 112 RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTKASAGAGRKD 166
           RIQGGIATVPGFGWWPIKAYRPCP FV +GGRY+R GQSMDEV  G   +K+S      D
Sbjct: 88  RIQGGIATVPGFGWWPIKAYRPCPAFVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSD 147

The following BLAST results are available for this feature:
BLAST of Lcy11g007650 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy11g007650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J5I47.6e-6988.02uncharacterized protein LOC111481538 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J0C41.7e-6886.98uncharacterized protein LOC111481538 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FN064.9e-6886.90uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A6J1C7J92.4e-6786.06uncharacterized protein LOC111008142 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A5D3D0031.3e-6078.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Lcy11g007650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7031146.12.2e-7085.71hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022982784.11.6e-6888.02uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima][more]
XP_023527851.12.0e-6888.02uncharacterized protein LOC111790947 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022982791.13.5e-6886.98uncharacterized protein LOC111481538 isoform X2 [Cucurbita maxima][more]
XP_023527861.14.5e-6886.98uncharacterized protein LOC111790947 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of Lcy11g007650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42070.12.0e-2956.20unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..34
NoneNo IPR availablePANTHERPTHR47721OS01G0235100 PROTEINcoord: 1..166
NoneNo IPR availablePANTHERPTHR47721:SF2OS01G0235100 PROTEINcoord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g007650.1Lcy11g007650.1mRNA