Lcy11g007500 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g007500
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr11: 7627474 .. 7628308 (+)
RNA-Seq ExpressionLcy11g007500
SyntenyLcy11g007500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCAACCCCATCACTCTCAACTCCAACTTAATCTCAGCATCATCAAGTTTTCTCTGGTTAACACCATTTAACAATGGCTTCCATGGTGGCTATTAAGACCTTCATTCTCATCTTCCTCATCTTCACTTGCTTTAATTCAGGTACTTCTGATCTTTTTCCATTTTTTTATCAGCTACATTGTTCGTCTTACGATTACCAAATTAAATTACCATTAGTCGACCTACTAACAAGTGAACTATTAATATGAAATAAATCAAAAATAACAATACTAAAGAGATTTTATCATTTAAGATTTTCGATCAGATAATATCTTAAATCACTATGAAAATGGTTTATGTTCCAATATTGCAGGAGCCACCCATGATTCGAGCATGAAGAAGGGTTATTTAAAGGAAGAACCAAGTCCTTGTGGTCAGGTAATTGAACCATATAGTTTTAATTTATTTTATTTTTCTTGTGTTGGAATGTGACCATTTTTGGATATAGTAGAATATTATTTCTTGGTTTTTACTGGTAATTATTTTAATAATGGATGGAGGACATTAATTTGCAGAGGATTGTGAAAGGAAAAGTGATGAGAAAGGTTTTGGGAATTGAAGCAATATTGATGGACTATCATGAGCCAGGTGCCAACCCAAGTCATGAGCCAAAAAAAGGAAGCCCTGGAGGTCGAGCAAGCATCAATCCTTGAATATTATTCAATAATGCTCTTTAAACCAATACAATAAAGTTTCTGTAATTCTTGAAACTCAGTACATAAATAAAATTACAACATTATGTAATGTATATTGATTTGCTGCACTTTATTACCATAAATAATAATATATCACTTTT

mRNA sequence

CTCCAACCCCATCACTCTCAACTCCAACTTAATCTCAGCATCATCAAGTTTTCTCTGGTTAACACCATTTAACAATGGCTTCCATGGTGGCTATTAAGACCTTCATTCTCATCTTCCTCATCTTCACTTGCTTTAATTCAGGAGCCACCCATGATTCGAGCATGAAGAAGGGTTATTTAAAGGAAGAACCAAGTCCTTGTGGTCAGAGGATTGTGAAAGGAAAAGTGATGAGAAAGGTTTTGGGAATTGAAGCAATATTGATGGACTATCATGAGCCAGGTGCCAACCCAAGTCATGAGCCAAAAAAAGGAAGCCCTGGAGGTCGAGCAAGCATCAATCCTTGAATATTATTCAATAATGCTCTTTAAACCAATACAATAAAGTTTCTGTAATTCTTGAAACTCAGTACATAAATAAAATTACAACATTATGTAATGTATATTGATTTGCTGCACTTTATTACCATAAATAATAATATATCACTTTT

Coding sequence (CDS)

ATGGCTTCCATGGTGGCTATTAAGACCTTCATTCTCATCTTCCTCATCTTCACTTGCTTTAATTCAGGAGCCACCCATGATTCGAGCATGAAGAAGGGTTATTTAAAGGAAGAACCAAGTCCTTGTGGTCAGAGGATTGTGAAAGGAAAAGTGATGAGAAAGGTTTTGGGAATTGAAGCAATATTGATGGACTATCATGAGCCAGGTGCCAACCCAAGTCATGAGCCAAAAAAAGGAAGCCCTGGAGGTCGAGCAAGCATCAATCCTTGA

Protein sequence

MASMVAIKTFILIFLIFTCFNSGATHDSSMKKGYLKEEPSPCGQRIVKGKVMRKVLGIEAILMDYHEPGANPSHEPKKGSPGGRASINP
Homology
BLAST of Lcy11g007500 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.7e-11
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0

Query: 29 SMKKGYLKEEPSPCGQRIV--KGKVMRKVLG-IEAILMDYHEPGANPSHEPKKGSPGGR 85
          S+K+G  +E  +PCGQ  +  KGKVMRK+LG  E ILMDY+EP ANPSHEP++G+PGGR
Sbjct: 2  SLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

BLAST of Lcy11g007500 vs. ExPASy TrEMBL
Match: A0A0A0KYH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.8e-10
Identity = 46/82 (56.10%), Postives = 53/82 (64.63%), Query Frame = 0

Query: 7  IKTFILIFLIFTCF-NSGATHDSSMKKGYLKEEPSPCGQRIVK--GKVMRKVLGIEAILM 66
          IKTFI IFLI   F NSG  HD S+KKG   +  +PCGQ IV+   KV RK+LG EA   
Sbjct: 5  IKTFIFIFLIIFMFPNSGDAHDLSLKKGL--KLSNPCGQLIVEKNNKVTRKLLGAEA-FA 64

Query: 67 DYHEPGANPSHEPKKGSPGGRA 86
          DY  P  N  HEP+ G+PGGRA
Sbjct: 65 DYASPDHNTRHEPRFGNPGGRA 83

BLAST of Lcy11g007500 vs. ExPASy TrEMBL
Match: A0A5D3D203 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003180 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09
Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 0

Query: 7  IKTFILIFL-IFTCFNSGATHDSSMKKGYLKEEPSPCGQRIVK--GKVMRKVLGIEAILM 66
          IKTFI IFL IFT  +SG   D S+KKG   +  +PCGQ IV+   +V RK+LG E +L+
Sbjct: 5  IKTFIFIFLIIFTFPDSGDAGDLSLKKGL--KLSNPCGQMIVEKNNRVTRKLLGAE-VLL 64

Query: 67 DYHEPGANPSHEPKKGSPGGRA 86
          DY  P  N  HEP+ GSPGGRA
Sbjct: 65 DYASPDHNSRHEPRFGSPGGRA 83

BLAST of Lcy11g007500 vs. ExPASy TrEMBL
Match: A0A6A1ULL4 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004811 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05
Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 0

Query: 8  KTFILIFLIFTCFNSGATHD---SSMKKGYLKEEPSPCGQRIVKGKVMRKVLGIEAILMD 67
          K FI + L+   ++S    D    SM+  Y      P G+ +++ K  RK+LG    L D
Sbjct: 11 KAFIPVLLLLLIWSSSVRADGFRDSMELTY------PHGEVMIRIKA-RKLLGRVDTLSD 70

Query: 68 YHEPGANPSHEPKKGSPGGRASINP 90
          Y  P ANP+HEPKKGSPGG+ S NP
Sbjct: 71 YQYPSANPTHEPKKGSPGGKGSNNP 88

BLAST of Lcy11g007500 vs. ExPASy TrEMBL
Match: A0A2N9H0D0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35859 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.0e-05
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 7  IKTFILIFLIFTCFNSGATHDSSMKKGYLKEEPSPCGQRIVKGKVMRKVLGIEAILMDYH 66
          IKTFILI L+    ++    D S K G   E+  P  +  ++ K MRK++G++A L+DYH
Sbjct: 10 IKTFILILLLVPICSASGKAD-SFKDG--MEQTYPPSEVKIQMK-MRKLIGVDA-LLDYH 69

Query: 67 EPGANPSHE---PKKGSPGGRASIN 89
          +P ANP+HE   PKKGS GG+   N
Sbjct: 70 DPVANPAHEPPPPKKGSTGGKGGNN 89

BLAST of Lcy11g007500 vs. NCBI nr
Match: KAG6600410.1 (hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-17
Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0

Query: 1  MASMVAIKTFILIFLIFTCFNSGATHDSSMKKGYLKEEPSPCGQRIVKGKVMRKVLGIEA 60
          MASM+ I   I  FLIFT  +SG  H  S++   L E+P+P  QRI    VMRKVLG++A
Sbjct: 1  MASMLPI---IFTFLIFTSPSSGRAHGPSLQPD-LNEKPNPYSQRI----VMRKVLGMDA 60

Query: 61 ILMDYHEPGANPSHEPKKGSPGGRASINP 90
           LMDYHEPGANPSHEP++GSPGGRAS NP
Sbjct: 61 TLMDYHEPGANPSHEPRRGSPGGRASFNP 81

BLAST of Lcy11g007500 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0

Query: 1  MASMVAIKTFILIFLIFTCFNSGATHDSSMKKGYLKEEPSPCGQRIVKGKVMRKVLGIEA 60
          MASM A KTFI IFL+F C NSG      +K+G   + P+PCGQ I++ K +RK+LG E 
Sbjct: 1  MASMAAFKTFIFIFLVFICPNSGDADGLRLKEGL--KLPNPCGQVIIEKKGVRKLLGAEE 60

Query: 61 ILMDYHEPGANPSHEPKKGSPGGRA 86
           L+DY  P  NP HEP+ G+PGGRA
Sbjct: 61 -LLDYASPSHNPRHEPRVGNPGGRA 82

BLAST of Lcy11g007500 vs. NCBI nr
Match: KAG6577123.1 (hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-10
Identity = 45/86 (52.33%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 1  MASMVAIKTFILIFLIFTCFNSGATHDSSMKKGYLKEEPSPCGQ-RIVKGKVMRKVLGIE 60
          MASM A  TF  IFL+FT  NSG     ++K+G   + P+PCGQ R+ K KV RK+LG E
Sbjct: 1  MASMAAFNTFFFIFLLFTYPNSGVADGLNLKEGL--KLPNPCGQVRVEKNKVARKLLGAE 60

Query: 61 AILMDYHEPGANPSHEPKKGSPGGRA 86
              DY  P  N  HEP+ GSPGGRA
Sbjct: 61 E-FSDYASPEHNRRHEPRIGSPGGRA 83

BLAST of Lcy11g007500 vs. NCBI nr
Match: KAA0044962.1 (hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK16508.1 hypothetical protein E5676_scaffold21G003170 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-10
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0

Query: 29 SMKKGYLKEEPSPCGQRIV--KGKVMRKVLG-IEAILMDYHEPGANPSHEPKKGSPGGR 85
          S+K+G  +E  +PCGQ  +  KGKVMRK+LG  E ILMDY+EP ANPSHEP++G+PGGR
Sbjct: 2  SLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

BLAST of Lcy11g007500 vs. NCBI nr
Match: KGN53437.1 (hypothetical protein Csa_015314 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 9.9e-10
Identity = 46/82 (56.10%), Postives = 53/82 (64.63%), Query Frame = 0

Query: 7  IKTFILIFLIFTCF-NSGATHDSSMKKGYLKEEPSPCGQRIVK--GKVMRKVLGIEAILM 66
          IKTFI IFLI   F NSG  HD S+KKG   +  +PCGQ IV+   KV RK+LG EA   
Sbjct: 5  IKTFIFIFLIIFMFPNSGDAHDLSLKKGL--KLSNPCGQLIVEKNNKVTRKLLGAEA-FA 64

Query: 67 DYHEPGANPSHEPKKGSPGGRA 86
          DY  P  N  HEP+ G+PGGRA
Sbjct: 65 DYASPDHNTRHEPRFGNPGGRA 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TNM79.7e-1162.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYH74.8e-1056.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1[more]
A0A5D3D2032.4e-0954.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A1ULL42.7e-0542.35Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004811 PE=4 SV=1[more]
A0A2N9H0D08.0e-0544.71Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35859 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6600410.12.9e-1761.80hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6600409.11.5e-1354.12hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6577123.11.5e-1052.33hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0044962.12.0e-1062.71hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK1650... [more]
KGN53437.19.9e-1056.10hypothetical protein Csa_015314 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g007500.1Lcy11g007500.1mRNA