Lcy10g018560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g018560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	UvrABC system protein C
Location	Chr10: 46373729 .. 46374295 (+)
RNA-Seq Expression	Lcy10g018560
Synteny	Lcy10g018560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACTGCGTGTTGAAAGGCCCGGGAGAAAGGGACGATGTGGTCAAAGTGGTCACCGCCGATGGCGGAATCATGGAGCTCTTCACGCCAATCACGGCCGAGTGCATAACCGGTGAATATCCAGGCCACGCCATTTTCAAAAGCCGAAGCATATTCTCGGAGCCCCTTCTCCACAAGGACGACCTTCACGCCGGCCAGGTCTACTATCTCCTCCCGCTGAACCCCTACAAGCCCTCCGAGGTCGACACGCCCACCATCGTATCGACGCCGTATCGCATGTCCACGTGCGAGACACAGATCGCGGCGGCGAAGAAGCGGGCGGAGGCGGAGGTGTTCCCCAAGTACAGTAGCACGGGTGTGTGGAAGGTGAAGCTGGTGATCAGCCCGGAACAGCTCTCCGAGATTTTGTCGCAGGACAATCGCACCGAGGAGTTGATCGAGAACGTCAGGACCGTAGCCAAGTGTGGAAACGGCGTAGGATCTGCTGCCAACTCGGACCATTCCAGCGTGGCAGGTAGTTGGAAGGGGTCCGCCCTGGATAAGCCGCAGTATGGGTTGAAATGA

mRNA sequence

ATGGGAAACTGCGTGTTGAAAGGCCCGGGAGAAAGGGACGATGTGGTCAAAGTGGTCACCGCCGATGGCGGAATCATGGAGCTCTTCACGCCAATCACGGCCGAGTGCATAACCGGTGAATATCCAGGCCACGCCATTTTCAAAAGCCGAAGCATATTCTCGGAGCCCCTTCTCCACAAGGACGACCTTCACGCCGGCCAGGTCTACTATCTCCTCCCGCTGAACCCCTACAAGCCCTCCGAGGTCGACACGCCCACCATCGTATCGACGCCGTATCGCATGTCCACGTGCGAGACACAGATCGCGGCGGCGAAGAAGCGGGCGGAGGCGGAGGTGTTCCCCAAGTACAGTAGCACGGGTGTGTGGAAGGTGAAGCTGGTGATCAGCCCGGAACAGCTCTCCGAGATTTTGTCGCAGGACAATCGCACCGAGGAGTTGATCGAGAACGTCAGGACCGTAGCCAAGTGTGGAAACGGCGTAGGATCTGCTGCCAACTCGGACCATTCCAGCGTGGCAGGTAGTTGGAAGGGGTCCGCCCTGGATAAGCCGCAGTATGGGTTGAAATGA

Coding sequence (CDS)

ATGGGAAACTGCGTGTTGAAAGGCCCGGGAGAAAGGGACGATGTGGTCAAAGTGGTCACCGCCGATGGCGGAATCATGGAGCTCTTCACGCCAATCACGGCCGAGTGCATAACCGGTGAATATCCAGGCCACGCCATTTTCAAAAGCCGAAGCATATTCTCGGAGCCCCTTCTCCACAAGGACGACCTTCACGCCGGCCAGGTCTACTATCTCCTCCCGCTGAACCCCTACAAGCCCTCCGAGGTCGACACGCCCACCATCGTATCGACGCCGTATCGCATGTCCACGTGCGAGACACAGATCGCGGCGGCGAAGAAGCGGGCGGAGGCGGAGGTGTTCCCCAAGTACAGTAGCACGGGTGTGTGGAAGGTGAAGCTGGTGATCAGCCCGGAACAGCTCTCCGAGATTTTGTCGCAGGACAATCGCACCGAGGAGTTGATCGAGAACGTCAGGACCGTAGCCAAGTGTGGAAACGGCGTAGGATCTGCTGCCAACTCGGACCATTCCAGCGTGGCAGGTAGTTGGAAGGGGTCCGCCCTGGATAAGCCGCAGTATGGGTTGAAATGA

Protein sequence

MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHKDDLHAGQVYYLLPLNPYKPSEVDTPTIVSTPYRMSTCETQIAAAKKRAEAEVFPKYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGSWKGSALDKPQYGLK

Homology

[Close]

BLAST of Lcy10g018560 vs. ExPASy TrEMBL
Match: A0A6J1IAU7 (uncharacterized protein LOC111472889 OS=Cucurbita maxima OX=3661 GN=LOC111472889 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 167/194 (86.08%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER DVVKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKR---AEAEVFP 120
           D+LH GQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKR   AEAEVFP
Sbjct: 69  DELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEAEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK QYGLK
Sbjct: 189 WKGSAMDKLQYGLK 202

[Close]

BLAST of Lcy10g018560 vs. ExPASy TrEMBL
Match: A0A6J1IIP8 (uncharacterized protein LOC111474379 OS=Cucurbita maxima OX=3661 GN=LOC111474379 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 167/194 (86.08%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER DVVKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKRA---EAEVFP 120
           D+LH GQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKRA   EAEVFP
Sbjct: 69  DELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK QYGLK
Sbjct: 189 WKGSAMDKLQYGLK 202

[Close]

BLAST of Lcy10g018560 vs. ExPASy TrEMBL
Match: A0A6J1HDL7 (uncharacterized protein LOC111462928 OS=Cucurbita moschata OX=3662 GN=LOC111462928 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.7e-86
Identity = 166/194 (85.57%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER D+VKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERGDMVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKRA---EAEVFP 120
           D+LHAGQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKRA   EAEVFP
Sbjct: 69  DELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK  YGLK
Sbjct: 189 WKGSAMDKLPYGLK 202

[Close]

BLAST of Lcy10g018560 vs. ExPASy TrEMBL
Match: A0A6J1CTQ7 (uncharacterized protein LOC111014247 OS=Momordica charantia OX=3673 GN=LOC111014247 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 149/182 (81.87%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MGNCVLKG--PGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLL 60
           MGNCVLKG  P  RDDVVKVVTADGGIMELF P+TAECITGEYPGHAIFKSRSIFSEPLL
Sbjct: 1   MGNCVLKGLHPEIRDDVVKVVTADGGIMELFAPVTAECITGEYPGHAIFKSRSIFSEPLL 60

Query: 61  HKDDLHAGQVYYLLPLNPYKPS--EVDTPTIVSTPYRMSTCETQIAAAKKRAEAEVFPKY 120
           HK++LHAG+VYYLLPLNPYKPS    D  +++STPYRMST +   A A   AEAEVFPKY
Sbjct: 61  HKEELHAGEVYYLLPLNPYKPSAANADAGSVLSTPYRMST-KRAGAGAGSEAEAEVFPKY 120

Query: 121 SSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGSWK 179
           SS+GVWKVKLVISPEQLS+ILS D+RTEELIENVRTVAKCGNGVGSA NSDHSSVA SWK
Sbjct: 121 SSSGVWKVKLVISPEQLSQILSHDSRTEELIENVRTVAKCGNGVGSAPNSDHSSVASSWK 180

[Close]

BLAST of Lcy10g018560 vs. ExPASy TrEMBL
Match: A0A5D3DB01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00320 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-61
Identity = 128/194 (65.98%), Postives = 150/194 (77.32%), Query Frame = 0


Query: 1   MGNCVLKGPG------ERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFS 60
           MGNC+LKG G      E + +VKVVT  GGIMEL+TPITAECITGEYPGHAIFKSRSIFS
Sbjct: 1   MGNCILKGAGAGGREAEVNKMVKVVTVGGGIMELYTPITAECITGEYPGHAIFKSRSIFS 60

Query: 61  EPLLHKDDLHAGQVYYLLPLNPYKPSEVDTPTIVSTPYRMSTCETQIAAAKKRAEAEVFP 120
           E L HK++L  GQVYYLLPLN Y P+     +++STPYRMST E+Q      + +  +FP
Sbjct: 61  EALHHKEELEGGQVYYLLPLNQYMPNH--NHSVLSTPYRMSTAESQ-----TKPDHVLFP 120

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KY++ GVWKV LVI P+QLS+ILSQ NRT+ELI+NVRTVAKCGN + SA+NSDHSSVAGS
Sbjct: 121 KYNNAGVWKVNLVICPQQLSQILSQHNRTQELIDNVRTVAKCGNALESASNSDHSSVAGS 180

Query: 181 WKGSALDKPQYGLK 189
           WK    DKP YG K
Sbjct: 181 WK----DKPHYGFK 183

[Close]

BLAST of Lcy10g018560 vs. NCBI nr
Match: XP_023540170.1 (uncharacterized protein LOC111800623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 7.3e-87
Identity = 168/194 (86.60%), Postives = 175/194 (90.21%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER DVVKVVT DGGIMEL+ PITAECITGEYPGHAIF SRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKRA---EAEVFP 120
           D+LHAGQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKRA   EAEVFP
Sbjct: 69  DELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DKPQYGLK
Sbjct: 189 WKGSAMDKPQYGLK 202

[Close]

BLAST of Lcy10g018560 vs. NCBI nr
Match: KAG7028490.1 (hypothetical protein SDJN02_09671, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 168/194 (86.60%), Postives = 175/194 (90.21%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER DVVKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 44  MGNCVLKVAGERGDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 103

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKRA---EAEVFP 120
           D+LHAGQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKRA   EAEVFP
Sbjct: 104 DELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFP 163

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 164 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 223

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK QYGLK
Sbjct: 224 WKGSAMDKLQYGLK 237

[Close]

BLAST of Lcy10g018560 vs. NCBI nr
Match: XP_022975258.1 (uncharacterized protein LOC111474379 [Cucurbita maxima])

HSP 1 Score: 327.4 bits (838), Expect = 8.1e-86
Identity = 167/194 (86.08%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER DVVKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKRA---EAEVFP 120
           D+LH GQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKRA   EAEVFP
Sbjct: 69  DELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK QYGLK
Sbjct: 189 WKGSAMDKLQYGLK 202

[Close]

BLAST of Lcy10g018560 vs. NCBI nr
Match: XP_022974256.1 (uncharacterized protein LOC111472889 [Cucurbita maxima])

HSP 1 Score: 327.4 bits (838), Expect = 8.1e-86
Identity = 167/194 (86.08%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER DVVKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKR---AEAEVFP 120
           D+LH GQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKR   AEAEVFP
Sbjct: 69  DELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEAEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK QYGLK
Sbjct: 189 WKGSAMDKLQYGLK 202

[Close]

BLAST of Lcy10g018560 vs. NCBI nr
Match: XP_022962561.1 (uncharacterized protein LOC111462928 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85
Identity = 166/194 (85.57%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLLHK 60
           MGNCVLK  GER D+VKVVT DGGIMEL+ PITAECITGEYPGHAIFKSRSIFSEPLLHK
Sbjct: 9   MGNCVLKVAGERGDMVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFSEPLLHK 68

Query: 61  DDLHAGQVYYLLPLNPYKPS---EVDTPTIVSTPYRMSTCETQIAAAKKRA---EAEVFP 120
           D+LHAGQVYYLLPLNPYKPS   E D P++VSTPYRMSTCE+Q A AKKRA   EAEVFP
Sbjct: 69  DELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFP 128

Query: 121 KYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAKCGNGVGSAANSDHSSVAGS 180
           KYSSTGVWKVKLVI PEQLSEIL Q NRTEELIENVRTVAKCGNGVGSAA+SDHSSVAGS
Sbjct: 129 KYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGS 188

Query: 181 WKGSALDKPQYGLK 189
           WKGSA+DK  YGLK
Sbjct: 189 WKGSAMDKLPYGLK 202

[Close]

BLAST of Lcy10g018560 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 158.3 bits (399), Expect = 6.0e-39
Identity = 97/193 (50.26%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 1   MGNCVLKGPG-------ERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSI- 60
           MGNCV KG G       + D ++KVVT +GG+MEL  PI AE IT E+PGH I  S S+ 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  -FSEPLLHKDDLHAGQVYYLLPL--NPYKPSEVDTPTIVSTPYRMSTCETQIAAAKKRAE 120
             S PLLH ++L  G +YYLLPL  +    +++D+   +STPYRMS  +T I AA     
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSSAAATAQLDSSDQLSTPYRMSFGKTPIMAALSG-- 120

Query: 121 AEVFPKYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRTVAK-----CGNGVGSAA 178
                     GVWKV+LVISPEQL+EIL++D  TE L+E+VRTVAK     CG GV S A
Sbjct: 121 -------GGCGVWKVRLVISPEQLAEILAEDVETEALVESVRTVAKCGGYGCGGGVHSRA 180

[Close]

BLAST of Lcy10g018560 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 64/183 (34.97%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MGNCVLKGPG--ERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRSIFSEPLL 60
           MGNC+  G G  E D ++KV+ +DGG++E ++P+TA  ++  + GHA+F +  +  +PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61  HKDDLHAGQVYYLLP--LNPYKPSEVDTPTIVS--------TPYRMS------------- 120
           H   L  GQ YYL P  ++    + V +  + S        TPYRMS             
Sbjct: 61  HDHLLVPGQSYYLFPNIVSDELKTFVGSCHVRSNSESLSAITPYRMSLDYNHRVLKRSYT 120

Query: 121 ---TCETQIAAAKKRAEAEVFPKYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENVRT 156
              +  + I   +K  +       S   +WKV L+I+ E+L +ILS+D RT ELIE+VR 
Sbjct: 121 DVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNELIESVRA 180

[Close]

BLAST of Lcy10g018560 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.5e-05
Identity = 43/171 (25.15%), Postives = 70/171 (40.94%), Query Frame = 0


Query: 1   MGNCVLKGPGERDDVVKVVTADGGIMELFTPITAECITGEYPGHAIFKSRS-----IFSE 60
           MGN ++     R + VKV+  DG I  L TP+TA   T EYPG  +  S +     + ++
Sbjct: 1   MGNTIM----VRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAK 60

Query: 61  PLLHKDDLHAGQVYYLLPLNPYKPSEVDTPTIVSTPYRMSTCETQIAAAKKR-------- 120
           PL     L     Y+L+ L P     VD       PYR          AK+R        
Sbjct: 61  PLEPNQILKPNHTYFLVDLPP-----VDKRN--KLPYRRVMSGNIHVGAKERLEMLMLSR 120

Query: 121 --------AEAEVFPKYSSTGVWKVKLVISPEQLSEILSQDNRTEELIENV 151
                   A ++V       G  +V+L +   Q+++++ + +   E+   +
Sbjct: 121 RTVSDVGAARSDVVGDGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKI 160

[Close]

BLAST of Lcy10g018560 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 44.7 bits (104), Expect = 9.7e-05
Identity = 26/95 (27.37%), Postives = 43/95 (45.26%), Query Frame = 0


Query: 17  KVVTADGGIMELFTPITAECITGEYPGHAIFKSRS-----IFSEPLLHKDDLHAGQVYYL 76
           KV+  DG    + TP+TA  +T +YPG+ +  S++     + S+PL     L   + Y+L
Sbjct: 13  KVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEPNQTLKPKKTYFL 72

Query: 77  LPLNPYKPSEVDTPTIVSTPYRMSTCETQIAAAKK 107
           + L    P      T    PYR       + A ++
Sbjct: 73  VELPKLPPETTAVDTENKLPYRRVMSGIHVGAKER 107

[Close]

BLAST of Lcy10g018560 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 35/147 (23.81%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 17  KVVTADGGIMELFTPITAECITGEYPGHAIFKSRSI-----FSEPLLHKDDLHAGQVYYL 76
           KV+  DG   +L TP+TAE +  ++PGH +  S S+      ++PL  K  L A ++Y++
Sbjct: 12  KVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAKQRLEAKRLYFV 71

Query: 77  L-PLNPYKPSEVDTPTIVSTPYRMSTCETQIAAAKKRAEAEVF-------PKYSSTGVWK 136
           + P+    P  V +   VS   R+   E+ + A +  ++  +         +     V +
Sbjct: 72  VEPVKECPPRRVRSGIHVSAKERL---ESLMLARRSSSDLSILKPPGGWTTEEEEGAVRR 131

Query: 137 VKLVISPEQLSEILSQDNRTEELIENV 151
           VK+ I   +L +++ +     E  + +
Sbjct: 132 VKVRIPKAELEKLVKEGATEAEATQKI 155

The following BLAST results are available for this feature:

BLAST of Lcy10g018560 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g018560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAU7	3.9e-86	86.08	uncharacterized protein LOC111472889 OS=Cucurbita maxima OX=3661 GN=LOC111472889...	[more]
A0A6J1IIP8	3.9e-86	86.08	uncharacterized protein LOC111474379 OS=Cucurbita maxima OX=3661 GN=LOC111474379...	[more]
A0A6J1HDL7	6.7e-86	85.57	uncharacterized protein LOC111462928 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1CTQ7	2.0e-74	81.87	uncharacterized protein LOC111014247 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5D3DB01	1.1e-61	65.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy10g018560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540170.1	7.3e-87	86.60	uncharacterized protein LOC111800623 [Cucurbita pepo subsp. pepo]	[more]
KAG7028490.1	1.2e-86	86.60	hypothetical protein SDJN02_09671, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022975258.1	8.1e-86	86.08	uncharacterized protein LOC111474379 [Cucurbita maxima]	[more]
XP_022974256.1	8.1e-86	86.08	uncharacterized protein LOC111472889 [Cucurbita maxima]	[more]
XP_022962561.1	1.4e-85	85.57	uncharacterized protein LOC111462928 [Cucurbita moschata]	[more]

BLAST of Lcy10g018560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61920.1	6.0e-39	50.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G64700.1	2.0e-21	34.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G37840.1	7.5e-05	25.15	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]
AT1G66480.1	9.7e-05	27.37	plastid movement impaired 2	[more]
AT2G01340.1	1.3e-04	23.81	Encodes a protein whose expression is responsive to nematode infection.	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..176 e-value: 6.3E-23 score: 82.1
None	No IPR available	PANTHER	PTHR33148:SF41	DUF4228 DOMAIN PROTEIN	coord: 1..173
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g018560.1	Lcy10g018560.1	mRNA