Lcy08g019130 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g019130
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-box protein 1a-like
Location	Chr08: 49773165 .. 49779916 (+)
RNA-Seq Expression	Lcy08g019130
Synteny	Lcy08g019130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATGGGTGTCGACATTTTTTTCTTTCTCCAAACTGGGTGTCGACACCATAATGTAATATGTAAATTGTAATTTGCATTATCGTTCAGTTAAACACAGTATATAAATTCAATGGTAAAGACAATTTTCTTGGGAAATAAAAATTCAAGAATTAAGTCCGCCCGCATCAAACAGACGGAGGAGGAAGAAGCATCTTTCTTGCGAGTTGTTAATGGCCACTTTGGACTCCGACGTGCCCATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAACGCCGTCGCTCTTTGGGCATGGGGTAATTTCAAAACCCTAATCTTTGCGATTACTTCTCTCATTGTCCTGTTTGTCTTCATGCATCGAAACCTTCGTCTTTCCCTCTCTCTTTTTTGGTTTGAAAAGAAGAAATTATTGTCTCTAATTTTAGTGTTATTAATTTCTTCATGCAGATATCGTTGTCGATAACTGTGCGATCTGCAGGAACCATATCATGGATCTTTGTAAGTTTATCATTATTTGACCTAAGTTTTAAGATATCTGGAGAAATCTTCTTCCTCTTCTTCTTCGTCGCCCTGCCTTTTATTTTCTATATCATTTATGTTTACTTTAACCATTGACCATTGTTTGGTATGTAGGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCAGCGAGGAATGTACTGTGGCGTGGGGTACGTTTTCTTATTCCCTCAACCTATCCCCAACCCATTCACACAGATACACTGTGCTATTATTTTCTGTCTTTGTTCGCTCCTTACGGATACTGAGGTGGAGGATTGGGCCTCTCTGCGGAATATTTAGAGCAATATATTATTTCAAATTAGTAGGATACCGAAGTGTGGTCTCTCCATGTCAGTGTTTACTTTTCAGTCAATTCCTCTGCCCTTAGATTGTCTGCCAATCATAGCCAGATTGACCTAATCTGTAGTAAGCTCGAAGGCTAAAATTCTGAACAAATTTCTAGTCTGCTGCAAGGAAAACTGAATACAGCTTCAAAGAAGATTGCCGAATTGCTGGCTGGTGTATCCTGTGTAGAAAAGACGAGCCACTCCCACTTTTATCCTCTGCCCCTTTGCTTCTATTTGTTGGGCTAAACTTTGGCATGTATTTGGTATGAGTTGGTGCTCCCCTAAGATCTCTGAGAGTTTGACCATCCAACTGTTAGGACACAATCTAAATGGTCAAGTTAGAATCGCTTCGATTAGTGCATTGTTTACTACTTTTTAGCAACTCTGATTCAAGGTCAAGAGAAATCAGAGAATTTTTTAAGGGGTTGATTCTAGCTCAGAAAGCTTTTGGGACCTCAGGAAACTCTAATCATCTTCTTGTTTCCTTCTTTCTAAAGAATTTTGTTTTTATGAGATTATTTATGCCTGTAAGAAGCCTTTTTGTAACCCATTGGTCTTGTGGGAATATCTCATCCCTTTTTTCAGTATATGTTCTTTTGTTTTGTACTATTTTGTCTCCTTTGGGGAAAAAAAAAAGAGAGAGTAACTAGTAAGTGTCTTTCTTAGTTTGGAAACAAGATCTTTACTAATTGAGAAGAAGGGGGGTTGAGAATTGGTGAAGTTAAGGAATAAAACTTTGCTCTGCCGGTTAAGTTAACATGGAGATTCCAAATGGAATTGAGTGGATTTTGGTGATAGGCCATTTTAAGTTTTTAGGCAAAACAGGTGTGAAATTATTTCACAAAGAACACAGAGGAAAGAAGGAAACTTTTGTATGTGATTATTTGATATTGCAAAAATAAGGCATTTTATTGAAGGAAACTCTCAATTTTAAGTGGCTTTTGTTGCAATGATAAATTTTTGGAGTAAAACTTGGCTAGGGAATCCTTTGTTGTTAGACAATATCTCCTAATTTATTTGTAGTGCTGGAAAGGAAGGAAATCAAAGTGGGTGAGGTGATGGAAAACGAAACAAGACCTCAGAATTTAATGACATGGAGGAACTTATCTAACTTGGAACCAGCGACCAGTAGGAAGTGTTGTTGGAATTACTTTATTGGAGCAAGGATTTCATATTAAATGTTGTCAGCCATCTAATTAACTGGGGAACAAAAATTTTAGCTTTGAGAAGTGGGGTAGTTAAGAAAGAAAACTTAGCTTTGCTTACTAAGTGGATGTGGCGATTTTGAATTGAACAAAATGAGTCAGGTTGGTTTACCAAGAAGAACATTGGGGCAATCACTTTTGCTTGTGGATTAACACAACTATATTGAGGGAAATTATAGACTTGAATTGGATTTCTCTGGAAGGGTAATATTTTTTAGGAAATCTTTGGTATTGAATCTGTTGATAAAGTTTTGAAACTTGCTTGCAAATTCTGAGAGGGGAAGTTCAATCGGGCAGGTGTGTGGATTTGATGACAAGGAGGAACTTTAACAAACTTGGAAGTGCAGGAGTATAAGGGGCTGCTGGAGTTACTTACTAAGGAAAGGATTACAAGGAATAAGGTTAGGATGAGAAAGGAAAAGCTCGTAAAGCGGGGGCGAGTTGGCCATCAATTAGGAAACAACAAATTTGCTGATTCAGTAGGAATGTTGAGTAGTGGAGTACTTTATGGAATTGAGCGGGTTTTGGTGGTGGGCCATTTTAAGTTTTTAGGCAACAAAGGTGTGAAGTTATTTCACAAAGGACACGGAGGAAACTATTGTAAGTGATTATTTGATATTGTAAAAATAAGGCATTTTATTGAAGGTAACTCTTAATTTTATGTGGCTTTTGCTGCAATGATAAAGTTTTGGAGGAAAACTTGGCTAGGGAGTCCCTTGTTGTTAGACAATATTTCCTAATTTATTTGTAGGGCTGGAAAGGAAGGAAATCAAAGTGGGTGAGGTGATGGAAAATTAAACAAGACCCTGGAATTTAATGACAAGAAGGAACTTAACTAATTTTGGAAGCCAGCAACCAGACAGAAGTGTTGTTGGAATTACTTTATTGGAGCAAGGATTTCATATTAAATGTTGTCAGCCATCTAATTAACTGGGGAACAAAAATTTTTGCTTTGAGAAGTGGGGTAGTTAAGAAAGAAAACTTAGCTTTGCTTACTAAGTGGATGTGGAGATTTTGAATTGAACAAAATGAGTCAGGTTGGTTTACCAAGAAGAACATTGGGGCAATCACTTTTGCTTGTGGATTAACACAACTATATTGAGGGAAATTATAGACTTGAATTGGATTTCTCTGGAAGGGTAATATTTTTTAGGAAATCTTTGGTACTGAATCTGTTGATAAAGTTTTGAAACTTGCTTGCAAATTTTGAGAGGGGAAGTTCAATTGGGCAGGTGTGTGGATTTGATGACAAGGAGGAACTTTAACAAACTTAGAAGTGCATGAGTATAAGGGGCTGCTGGAATTACTTACTAAGGAAAGGATTACAAGGAATAAGGTTAGGATGAGAAAGGAAAAGCTCGTAAAGCGGGGGCGAGTTGGCCATCAATTAGGAAACAACAAATTTGCTGATTCAGTAGGAATGTTGAGTAGTGGAGTACTTTATGGAATTGAGCGGGTTTTGGTGGTGGGCCATTTTAAGTTTTTAGGCAAAAAAGGTGTGAAGTTATTTCACAATGGACGCGGAGGAAACTATTGTAAGTGATCATTTGATATTGTAAAAATAAGGCATTTTATTGAAGGAAACTCTCAATTTTATGTGGCTTTTGCTGCAATGATAAAGTTTTGGAGGAAAACTTGGCTAGGGAATCCCTTGTTGTTAGACAATTTTTCCTAATTTATTTTTAGGGCTGGAAAGGAAGGAAATCAAAGTGGGTGAGGTGATGGAAAATTAAACAAGACCCCGGAATTTAATGACAAGAAGGAACTTAACTAACTTGGAAGCCAGCAACCAGACAGAAGTGTTGTTGGAATTACTTTATTGGAGCAAGGATTTCATATTAAATGTTGTCAGCCCAATCTCTTTGTACTGATGCGAGAAACCTTTACTAGTTAAGATCTCTTTTGAACATATATATGAGTTATTTAAAAGGTGAAAACAGCTTGAACCTTTAAAAGAAATCTTGGTGGCCCATCTGCGGCAGTAGTTAGGGGTCTCCTTGAACTTCTTTGCAAGAAAAGGCCTTTTCCCCCAAAGATTTGGAGAAGGAAAAAGCATAAAAATAATGCAGGAGGTTAGAAAATCTTGTGGGGGTGAAGTTATTGTCACCATAAGACATTGCTTTCATGATAGAATAGAAATAAATCCTCAAGTTTTTCAAAGAGACAAGTGCTCTTAATTCTTTTACATGGACACAAATTTTCATTGATGATATGACAAGTTACAAGTAAATATTTCAGAACTCCTTTTTATAAATAAGAACAATAGCCCAATAAAGATCCCTACAGTTATACATAAAACACTTCACAACCTAGACCACTTTCTTTTTTCTTGATAAGAAACCATTTCATTGATGGTATGAAATTACAAAAGAAGGGGAAACCCCCAATTCAAGGGAGTTGCAAATAATCTATGCAACTGGATAAAGGAGAAGAGAAGCTGTAGTGAATCAAGGGAGTTGCAGATAATCTATGTAACTGGACCACGAGAAGAGAAGCTATAGTGATGGAGAAGAGGAGAGCATCGACCAAAAAAGTGAAAAACTATAAACTATAGCATCACAAAATCGATCAAAAGAAAGCTCTTGCCCTTTAAAGATTTTACAATTCCTTTCTTTCCGAGTAATCCAAAAGAATATTCTAACAAAATTCATACAAAGGAGCTTTTTTCCCCTTTTTAAAAGGATGTGCCACCAGAGCAGGAGAGAGAAGAGTAGGACCATTGAGGAGAGTGGTAGACCATCCAAAAGTTTGAAGAAGTAACTCCCAAAAAGCTGCTGCTTAATCACAAGAGCACAACCTAGACCTCTTGATGATATGTTCGAAATTAAAATGAAGAATTCAATCTAGAAAGGGAAGAAGCCATTTTCATCTTTAAAACTGCCAAAGAACTTCAACGAGAAACCTAAAGGAAGCAATGGTTGACAGCCCATCAAAGGACCTTTATGAAGAGAAACGCATCTGCCAGTTACTAACTACCTACCTTTCTAAGCGCTCAGGATTTTTGGTGGTCTCTCTTAAACATCTCCTAGAGAGCTTCGAGGCTAACCATCAACCTTTTTAAGACCTTAATAACAGGTATGAATGTAGAGGAGGTGAACAACTAGGCTAAAACCATAGTTGCAAAATTTTGTCTTCACGGTTTTGTTACCTTGGTCTCCCTGTTGGTGGTAACCCCAATTCCAATATCCTTTGGGAGCTAATATTCGATAAGATCAAGGCTAGATGAGCCGAATTGAAGATTTTCCAATGTTGAGAGGTGATATATGACTTCAGTCCAATCAGTTATCTTAAACCTTCCAAACCATTTGCCTTTTCTTATTGGAGTGGCTTCCCAAAGTTTTTTTTTTGTACTTTTGTAGCTTTTGATCAACTTGTTTATTTATTATTATTTTTTTGTAACTACATCAAGTGGTTGCAAGTCTTGCAGTCAACTCGACTAAATATTCTGTTTCTGTTCTGAGAAAAGATAAGGAAGAAATTGTTCACGTGGATGTTAATGTTAATAATTCAAATTTATTGCTATATTGACAAACAATTTGAGGTTGACAAAGATTCTATCTTAACAAAGATCATGGCCACGATGGAAATTTGCAAAAATCATTTGTACTTATTGCTTAATATAGCTATAGATCATATTTGGGATTTGTATTCATAAAGATAATGATCAAGACCATTGTTCTAGCTTCAGAGTATTTTTAGGATTGGTTAATTAAAACTTTCTCCAACTTACAGTATGAAACATTACTTTGCAATCCTCACCAAATTTTTATGTGCTGTTTTTGCTCTCGATGTGGAATTATAGCAGGAGCCAACGATAAAGATTTTCATTTTGTATTTGTAGGGGTGTGTAATCATGCATTTCATTTCCATTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGGTATGCATTTCAAGTTCTTCCCCTACCCTTCACCCACGATTTCTTTTATTGATTTTTGAAAATTTGAAGGAAGTTGTGCCATTTTACAGATAATAGCGAGTGGGAGTTTCAAAAGTACGGGCACTAAAACTTTGCTGTTGAGGATATGGATCCTTAAATTCTCATGGGGCTGTAATGGTGTTGTCGATCGACTCTCCCCATTTATGATTTCTGATAATAGCGATCTGAAGATGCATTTTGTTGCACAACTACAATTATCCAGATAATTAAATGCCAGCCAACTTGAAGACATTATCTTATTTTATTTCGGAGTTGTTTATAGAAATAGGCTAGAACTTGAACGCATTAGTCCTTGCTTCATCGCTTTCCATCTTTGTATTTATTTTAACATCTCACTCGGGATAATCTAGAAAATTTGGATCCTATTGTTGCCATTTGGGTTCTGTTTTAGGTCTGTCGGATAAACTTTTTACCAAAAAATAGTTATGCATTTCAAAGCATGAATACTTTAAAGTGATCTTACATTTGAATAGTTGTTAGTATTATAAATGAAAAGTTACCCATAGGCTTAAACGATGAGAAGATTAACATTGAGGATTAGGTTGAAATTCTGAGCACGATGAAAATTGTTCTCATACCTCTGCCTTCCCTTTCGGTGTTCTTTGTAATTTGACTTGTCTTTTTAATATTAATATCCTGAGGAATCAACTAGAAG

mRNA sequence

ATTAATGGGTGTCGACATTTTTTTCTTTCTCCAAACTGGGTGTCGACACCATAATGTAATATGTAAATTGTAATTTGCATTATCGTTCAGTTAAACACAGTATATAAATTCAATGGTAAAGACAATTTTCTTGGGAAATAAAAATTCAAGAATTAAGTCCGCCCGCATCAAACAGACGGAGGAGGAAGAAGCATCTTTCTTGCGAGTTGTTAATGGCCACTTTGGACTCCGACGTGCCCATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAACGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGCAGGAACCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCAGCGAGGAATGTACTGTGGCGTGGGGGGTGTGTAATCATGCATTTCATTTCCATTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGATAATAGCGAGTGGGAGTTTCAAAAGTACGGGCACTAAAACTTTGCTGTTGAGGATATGGATCCTTAAATTCTCATGGGGCTGTAATGGTGTTGTCGATCGACTCTCCCCATTTATGATTTCTGATAATAGCGATCTGAAGATGCATTTTGTTGCACAACTACAATTATCCAGATAATTAAATGCCAGCCAACTTGAAGACATTATCTTATTTTATTTCGGAGTTGTTTATAGAAATAGGCTAGAACTTGAACGCATTAGTCCTTGCTTCATCGCTTTCCATCTTTGTATTTATTTTAACATCTCACTCGGGATAATCTAGAAAATTTGGATCCTATTGTTGCCATTTGGGTTCTGTTTTAGGTCTGTCGGATAAACTTTTTACCAAAAAATAGTTATGCATTTCAAAGCATGAATACTTTAAAGTGATCTTACATTTGAATAGTTGTTAGTATTATAAATGAAAAGTTACCCATAGGCTTAAACGATGAGAAGATTAACATTGAGGATTAGGTTGAAATTCTGAGCACGATGAAAATTGTTCTCATACCTCTGCCTTCCCTTTCGGTGTTCTTTGTAATTTGACTTGTCTTTTTAATATTAATATCCTGAGGAATCAACTAGAAG

Coding sequence (CDS)

ATGGCCACTTTGGACTCCGACGTGCCCATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAACGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGCAGGAACCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCAGCGAGGAATGTACTGTGGCGTGGGGGGTGTGTAATCATGCATTTCATTTCCATTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGATAATAGCGAGTGGGAGTTTCAAAAGTACGGGCACTAA

Protein sequence

MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH

Homology

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BLAST of Lcy08g019130 vs. ExPASy Swiss-Prot
Match: Q940X7 (RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-61
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118

[Close]

BLAST of Lcy08g019130 vs. ExPASy Swiss-Prot
Match: Q9M2B0 (RING-box protein 1b OS=Arabidopsis thaliana OX=3702 GN=RBX1B PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-53
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MA+L+SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           DLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD  EWEFQKYGH
Sbjct: 61  DLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115

[Close]

BLAST of Lcy08g019130 vs. ExPASy Swiss-Prot
Match: P62877 (E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.8e-52
Identity = 90/108 (83.33%), Postives = 95/108 (87.96%), Query Frame = 0


Query: 10  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 69
           M    +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 70  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108

[Close]

BLAST of Lcy08g019130 vs. ExPASy Swiss-Prot
Match: P62878 (E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.8e-52
Identity = 90/108 (83.33%), Postives = 95/108 (87.96%), Query Frame = 0


Query: 10  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 69
           M    +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 70  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108

[Close]

BLAST of Lcy08g019130 vs. ExPASy Swiss-Prot
Match: Q9W5E1 (RING-box protein 1A OS=Drosophila melanogaster OX=7227 GN=Roc1a PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.4e-52
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 22  PSSTKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTV 81
           PSS+ K   KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTV
Sbjct: 11  PSSSSKGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTV 70

Query: 82  AWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           AWGVCNHAFHFHCISRWLKTRQVCPLDN EW+FQKYGH
Sbjct: 71  AWGVCNHAFHFHCISRWLKTRQVCPLDNREWDFQKYGH 108

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BLAST of Lcy08g019130 vs. ExPASy TrEMBL
Match: A0A6P4A6G4 (RING-box protein 1a OS=Ziziphus jujuba OX=326968 GN=LOC107423885 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.4e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. ExPASy TrEMBL
Match: A0A6J1DPM4 (RING-box protein 1a-like OS=Momordica charantia OX=3673 GN=LOC111021926 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.4e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. ExPASy TrEMBL
Match: M5X2V0 (RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G152700 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.3e-65
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. ExPASy TrEMBL
Match: A0A6J5U0H2 (RING-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15652 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.3e-65
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. ExPASy TrEMBL
Match: A0A4Y1R040 (PREDICTED: RING-box OS=Prunus dulcis OX=3755 GN=ALMOND_2B022646 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.3e-65
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. NCBI nr
Match: XP_015889019.1 (RING-box protein 1a [Ziziphus jujuba] >XP_022154746.1 RING-box protein 1a-like [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 4.9e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. NCBI nr
Match: XP_007218617.1 (RING-box protein 1a [Prunus persica] >XP_008232851.1 PREDICTED: RING-box protein 1a-like [Prunus mume] >XP_008232852.1 PREDICTED: RING-box protein 1a-like [Prunus mume] >XP_034202694.1 RING-box protein 1a-like [Prunus dulcis] >XP_034202695.1 RING-box protein 1a-like [Prunus dulcis] >PQP92865.1 RING-box protein 1a [Prunus yedoensis var. nudiflora] >CAB4269841.1 unnamed protein product [Prunus armeniaca] >ONI22810.1 hypothetical protein PRUPE_2G152700 [Prunus persica] >CAB4300233.1 unnamed protein product [Prunus armeniaca] >VVA19386.1 PREDICTED: RING-box [Prunus dulcis])

HSP 1 Score: 256.5 bits (654), Expect = 1.1e-64
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. NCBI nr
Match: XP_004306863.1 (PREDICTED: RING-box protein 1a-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.8 bits (652), Expect = 1.9e-64
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPM+PVGE SSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMIPVGEGSSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. NCBI nr
Match: XP_038889977.1 (RING-box protein 1a-like isoform X1 [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 3.2e-64
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVP G+ASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAGDASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. NCBI nr
Match: XP_024173543.1 (RING-box protein 1a [Rosa chinensis] >PRQ57760.1 putative transcription factor C2H2 family [Rosa chinensis])

HSP 1 Score: 254.6 bits (649), Expect = 4.1e-64
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPM+PVGE SSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMIPVGEGSSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117

[Close]

BLAST of Lcy08g019130 vs. TAIR 10
Match: AT5G20570.1 (RING-box 1 )

HSP 1 Score: 235.7 bits (600), Expect = 1.9e-62
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118

[Close]

BLAST of Lcy08g019130 vs. TAIR 10
Match: AT5G20570.2 (RING-box 1 )

HSP 1 Score: 222.2 bits (565), Expect = 2.1e-58
Identity = 109/142 (76.76%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAW------------------------GVCNHAFHFHCISR 118
           DLCIECQANQASATSEECTVAW                        GVCNHAFHFHCISR
Sbjct: 61  DLCIECQANQASATSEECTVAWEDDQNNCNKYFCILDCSMKDDHLEGVCNHAFHFHCISR 120

[Close]

BLAST of Lcy08g019130 vs. TAIR 10
Match: AT5G20570.3 (RING-box 1 )

HSP 1 Score: 221.9 bits (564), Expect = 2.8e-58
Identity = 108/136 (79.41%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD-------------- 60
           MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAW               
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWGNLENPYTLSSIGLS 60

Query: 61  ----IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ 118
               IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ
Sbjct: 61  MFRYIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ 120

[Close]

BLAST of Lcy08g019130 vs. TAIR 10
Match: AT3G42830.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-54
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MA+L+SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
           DLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD  EWEFQKYGH
Sbjct: 61  DLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115

[Close]

BLAST of Lcy08g019130 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-16
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 27  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNH 86
           K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNH
Sbjct: 2   KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNH 61

Query: 87  AFHFHCISRWL--KTRQV-CPLDNSEWEFQK 115
           AFH HCI +W+  +T Q  CP+   EW+F++
Sbjct: 62  AFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87

The following BLAST results are available for this feature:

BLAST of Lcy08g019130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940X7	2.6e-61	92.37	RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1	[more]
Q9M2B0	2.0e-53	83.90	RING-box protein 1b OS=Arabidopsis thaliana OX=3702 GN=RBX1B PE=2 SV=1	[more]
P62877	3.8e-52	83.33	E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1	[more]
P62878	3.8e-52	83.33	E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1	[more]
Q9W5E1	6.4e-52	91.84	RING-box protein 1A OS=Drosophila melanogaster OX=7227 GN=Roc1a PE=1 SV=1	[more]

BLAST of Lcy08g019130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P4A6G4	2.4e-65	100.00	RING-box protein 1a OS=Ziziphus jujuba OX=326968 GN=LOC107423885 PE=4 SV=1	[more]
A0A6J1DPM4	2.4e-65	100.00	RING-box protein 1a-like OS=Momordica charantia OX=3673 GN=LOC111021926 PE=4 SV=...	[more]
M5X2V0	5.3e-65	99.15	RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G152700 ...	[more]
A0A6J5U0H2	5.3e-65	99.15	RING-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS...	[more]
A0A4Y1R040	5.3e-65	99.15	PREDICTED: RING-box OS=Prunus dulcis OX=3755 GN=ALMOND_2B022646 PE=4 SV=1	[more]

BLAST of Lcy08g019130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_015889019.1	4.9e-65	100.00	RING-box protein 1a [Ziziphus jujuba] >XP_022154746.1 RING-box protein 1a-like [...	[more]
XP_007218617.1	1.1e-64	99.15	RING-box protein 1a [Prunus persica] >XP_008232851.1 PREDICTED: RING-box protein...	[more]
XP_004306863.1	1.9e-64	98.29	PREDICTED: RING-box protein 1a-like [Fragaria vesca subsp. vesca]	[more]
XP_038889977.1	3.2e-64	98.29	RING-box protein 1a-like isoform X1 [Benincasa hispida]	[more]
XP_024173543.1	4.1e-64	97.44	RING-box protein 1a [Rosa chinensis] >PRQ57760.1 putative transcription factor C...	[more]

BLAST of Lcy08g019130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20570.1	1.9e-62	92.37	RING-box 1	[more]
AT5G20570.2	2.1e-58	76.76	RING-box 1	[more]
AT5G20570.3	2.8e-58	79.41	RING-box 1	[more]
AT3G42830.1	1.4e-54	83.90	RING/U-box superfamily protein	[more]
AT3G05870.1	5.8e-16	39.56	anaphase-promoting complex/cyclosome 11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 49..107 e-value: 1.9E-25 score: 88.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 18..117 e-value: 1.4E-35 score: 123.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 1..117
None	No IPR available	PANTHER	PTHR11210:SF41	E3 UBIQUITIN-PROTEIN LIGASE RBX1	coord: 1..117
None	No IPR available	CDD	cd16485	mRING-H2-C3H2C2D_RBX1	coord: 49..110 e-value: 2.17963E-44 score: 136.73
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 29..114
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..107 score: 9.30263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g019130.1	Lcy08g019130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0031461	cullin-RING ubiquitin ligase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding