Lcy08g012660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g012660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	nifU-like protein 3, chloroplastic
Location	Chr08: 41917753 .. 41920147 (+)
RNA-Seq Expression	Lcy08g012660
Synteny	Lcy08g012660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGCTGAGCTCAACGTGTGGCTCCATTTATCGCACGGTCTTCCATTTCAACTTCCATCCACAAATTCCCATTACGCTTCTACTCAACTGATCTTCATCCCAATCTCCAAATGCTTTCCTTCTGCTGAATCAGAATCTAAAATCTCCATTGAAATACCGTTCAAATGGCCTAAGAGCTGAGTTTATTGCTCGCATTTCAATGGTGGGCGCTCTCTCGACTCGAGCTCAAGGTCTCAAAGCAACTCCAAGGGCTGCGATTGTGTATCCTTCACCTTCTGCGCGAACTTCAGCTTCCCATTTGTCGCTCTTCAAGGTCGGTTTCTGGATTCTTGTTTGTAATCTTGAGCAATTTCTTTGTTCGTTTGGGTAAATTTTAGTTATGCAACTGACGGGCTGATACTCTTCGAAACAGAGTTCGTTCTTCAGAGGTCAATTTTGTTGCCGGCGCTTTCTTCGATTGAATTCAAATTTTACTCGTACGCGTCATATAGGTAGCATTTCTGGATTTCACTTTTACGATGATCCATGACGAAAATGAAAATTGGGCTATTCTTGGAGTTATAAGATGATGTTTTAGTTAGTTGAACTGATTTAAATGCAAAAGTTTTGAGTAAAAAGATCATTTAGCAGTGTTACAAGCAACTTCTCTTCCAAATTTGTAGTAAATTCTTAGAACTTGAGCAATTTGGTTTGTGCCAATTTGATGGAGTCTATCCAGTATCCAAGGGTTCACAAAAAATTTCTTCTATCCATCCTAATACTAAGGCCCTATGCATAGAGAAACCACCAACTAACTAAAGTTAGTAAGAAACTAAAACAATTGCACCCAAATAACTGTTTAACAAACAAGCTAATTAACAAATTCTCTAACTCATTACATCACAATCTATGCAATGTGGTTAGTTTTTACTCCAATTTGATTGGATTTTGTGGGTTTTGTGTTGCTAAGGGAGTGTGGTGGTATCACCCAGTTGTGTTCTGCCATTGACTGAGGAAAATGTGGAGAAGGTGTTGGATGAGGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACAATGACACTGAAAATGGGAATTGAGACCAGACTCAGAGACAAGATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAATGAGGAAAATGTTGAAAAGGTAAAGAGTCTCTCAATTCAATTTTCAGCCATGTAGAAAGGAATTTAAAAACACTTGCATAGATGATCATAGAATTGTTTTGCAAGAACTCAACTGACAGAAGAAGCATGCTTACATAGATGATCATAGAATTTTCATCTATCTAGATATAAATGTTCTAATATATTTCTAAATTCTACACTGCTGCTTATCCATATAGGCATCTTAGGTTGGTGGTAATTTAACAAACTGAAAACTTATCCATTGGAAAGAGAAGTCATTTTACAATCAATCTTTACAGAGATTTTCTATCTGTTTGTTCTGCAAACAATATGAGTGTGGTTTTTTTATGATTTCATTTTGGTTGGTGCTGAGGACAATTGAGAGAGAACAAGAAAACGATTATGTTTCATTGAATACTTAATTGATCTAGAAGCATGACATATAATAGCCTATTTATACCAACAAGATATGAGTAAACAACCAATCTACCCATAGGAGAGAAACTTCAAACCAATTCGAAAAAAAACCTATGGACATCTGAATACCAAATGGGTTTCCACAAAAAGTTGCCCAAAGGCACATAAGATTAAACGAAAAGAGATTTGGGCTTTGAAGTGTTTTCATAAACTTTCTGTACCCCATTTGTTTCTAGTGTGTTTGCTCCACTAGGAAGAAAAGAAATGAGAAGATGAAGGATAAAAGTGTTTGTTTTTTAGCTACTTGCAGAGATTAGGCCATACTTGGCAGGCACAGGAGGTGGAATTTTGGAACTTATGGAGATAAAAGATTATGTTGTTAAGGTGCGGCTAAGTGGACCTGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATTCCAGCCATTGCAGCTGTTCAGCTTGTAGAGTAGCAGCAGCTTTGAAGTGAAAGTGAAGTTTTACTTGCTCATATACTCAATAGATGCTGAGTTAAAGTTGTGACATCTTTTTCTCTTTCTTTTACTTCATTTTTTTTATTTTTACAATTGTAATCAGGTTGGTGGTGAATGTTGAGAATGGAGAAATATGTAGAGTTTTTTTTTTGGTTGGCATTTTCTGTTGTAGCCATTGTTGGATGTTGGAATTTCTCTCATTAATTTATTATACAGAGAGGCAGAGAAAGTGC

mRNA sequence

CTAGCTGAGCTCAACGTGTGGCTCCATTTATCGCACGGTCTTCCATTTCAACTTCCATCCACAAATTCCCATTACGCTTCTACTCAACTGATCTTCATCCCAATCTCCAAATGCTTTCCTTCTGCTGAATCAGAATCTAAAATCTCCATTGAAATACCGTTCAAATGGCCTAAGAGCTGAGTTTATTGCTCGCATTTCAATGGTGGGCGCTCTCTCGACTCGAGCTCAAGGTCTCAAAGCAACTCCAAGGGCTGCGATTGTGTATCCTTCACCTTCTGCGCGAACTTCAGCTTCCCATTTGTCGCTCTTCAAGAGTTCGTTCTTCAGAGGTCAATTTTGTTGCCGGCGCTTTCTTCGATTGAATTCAAATTTTACTCGTACGCGTCATATAGGGAGTGTGGTGGTATCACCCAGTTGTGTTCTGCCATTGACTGAGGAAAATGTGGAGAAGGTGTTGGATGAGGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACAATGACACTGAAAATGGGAATTGAGACCAGACTCAGAGACAAGATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAATGAGGAAAATGTTGAAAAGCTACTTGCAGAGATTAGGCCATACTTGGCAGGCACAGGAGGTGGAATTTTGGAACTTATGGAGATAAAAGATTATGTTGTTAAGGTGCGGCTAAGTGGACCTGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATTCCAGCCATTGCAGCTGTTCAGCTTGTAGAGTAGCAGCAGCTTTGAAGTGAAAGTGAAGTTTTACTTGCTCATATACTCAATAGATGCTGAGTTAAAGTTGTGACATCTTTTTCTCTTTCTTTTACTTCATTTTTTTTATTTTTACAATTGTAATCAGGTTGGTGGTGAATGTTGAGAATGGAGAAATATGTAGAGTTTTTTTTTTGGTTGGCATTTTCTGTTGTAGCCATTGTTGGATGTTGGAATTTCTCTCATTAATTTATTATACAGAGAGGCAGAGAAAGTGC

Coding sequence (CDS)

ATGGTGGGCGCTCTCTCGACTCGAGCTCAAGGTCTCAAAGCAACTCCAAGGGCTGCGATTGTGTATCCTTCACCTTCTGCGCGAACTTCAGCTTCCCATTTGTCGCTCTTCAAGAGTTCGTTCTTCAGAGGTCAATTTTGTTGCCGGCGCTTTCTTCGATTGAATTCAAATTTTACTCGTACGCGTCATATAGGGAGTGTGGTGGTATCACCCAGTTGTGTTCTGCCATTGACTGAGGAAAATGTGGAGAAGGTGTTGGATGAGGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACAATGACACTGAAAATGGGAATTGAGACCAGACTCAGAGACAAGATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAATGAGGAAAATGTTGAAAAGCTACTTGCAGAGATTAGGCCATACTTGGCAGGCACAGGAGGTGGAATTTTGGAACTTATGGAGATAAAAGATTATGTTGTTAAGGTGCGGCTAAGTGGACCTGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATTCCAGCCATTGCAGCTGTTCAGCTTGTAGAGTAG

Protein sequence

MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTRTRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE

Homology

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BLAST of Lcy08g012660 vs. ExPASy Swiss-Prot
Match: Q84RQ7 (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.0e-69
Identity = 142/191 (74.35%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 39  SSFFRGQFCCRRFLRLNSNFTRTRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGG 98
           S+F RGQF    F  L    TR     +V    SCV+PLTEENVE+VLDEVRPSLMADGG
Sbjct: 48  STFLRGQFQRIHFSWL--QHTRPLRKRTVFGHVSCVMPLTEENVERVLDEVRPSLMADGG 107

Query: 99  NVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTET-GLE 158
           NVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GLE
Sbjct: 108 NVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLE 167

Query: 159 LNEENVEKLLAEIRPYLAGTGGGILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREK 218
           LN+EN+EK+L+E+RPYL+GTGGG LEL+EI  YVVKVRL+GPAAGVMTVRVALTQKLRE 
Sbjct: 168 LNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRET 227

Query: 219 IPAIAAVQLVE 229
           IP+I AVQL+E
Sbjct: 228 IPSIGAVQLLE 236

[Close]

BLAST of Lcy08g012660 vs. ExPASy Swiss-Prot
Match: Q93W20 (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-61
Identity = 130/222 (58.56%), Postives = 163/222 (73.42%), Query Frame = 0


Query: 7   TRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTRTRHIGS 66
           T  Q +  +  ++++ P P   +S   L L        +    RFL     F R++ + +
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVV-SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V    P   +PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELM 186
           MT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EK+L EIRPYL GT  G L+L+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLV 193

Query: 187 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLV 228
           EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQL+
Sbjct: 194 EIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of Lcy08g012660 vs. ExPASy Swiss-Prot
Match: Q84LK7 (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.7e-51
Identity = 121/221 (54.75%), Postives = 153/221 (69.23%), Query Frame = 0


Query: 16  PRAAIVYPSPSARTSASHLSLFKSSFFRGQFC------CRRFLRLNSNFTRTRHIGSVV- 75
           P AA    +PS  TS+S  + FK + +    C        R +   ++      +G++  
Sbjct: 7   PMAAAAAVAPSTTTSSS--ASFKVAAYAWSSCRSSSSPATRLVAAPNHQRPPLVVGAIAG 66

Query: 76  VSP--SCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTM 135
           + P  +  LPLT  NVE VLD+VRP L ADGG+VALHEI G VV LKLQGACGSCPSS +
Sbjct: 67  LDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLI 126

Query: 136 TLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELME 195
           T+K GIE RL +KIP++  VE + D ETGLELNEENVEK+L EIRPYLAGTGGG L+ + 
Sbjct: 127 TIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLM 186

Query: 196 IKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLV 228
           IK  +VKVRL+GPAA V TVR+A+++KLREKIP+I  VQL+
Sbjct: 187 IKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225

[Close]

BLAST of Lcy08g012660 vs. ExPASy Swiss-Prot
Match: Q93W77 (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.3e-18
Identity = 54/141 (38.30%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 77  LTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 136
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 137 RDKIPEIL-EVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELMEIKDYVVKVR 196
           ++K  + L ++ Q+ D E   ++  E V   L  +RP +   GG + E++ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 197 LSGPAAGVMTVRVALTQKLRE 217
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of Lcy08g012660 vs. ExPASy Swiss-Prot
Match: P33179 (Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 GN=nifU PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 82  VEKVLD-EVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKI 141
           ++KVLD EVRP L+ADGG+V L+++DG +V + LQGACGSCPSST TLK+ IE+RLRD+I
Sbjct: 44  IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103

Query: 142 PEILEVEQI 150
              L VE +
Sbjct: 104 NPSLVVEAV 112

[Close]

BLAST of Lcy08g012660 vs. ExPASy TrEMBL
Match: A0A6J1EP39 (nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.5e-103
Identity = 203/228 (89.04%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV A STRAQ LK TP  A +Y SPS RTSASHLS FKSSFFRGQFC RRFL  NS+ TR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            RH+G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  RRHLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEKLLAEIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILEL+EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. ExPASy TrEMBL
Match: A0A6J1K7T6 (nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 203/228 (89.04%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV A STRAQ LK TP  A +Y SPS RTSASHLS FKSSFFRGQFC RRFL  NS+ TR
Sbjct: 1   MVAAFSTRAQALKPTPTTAPLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            RH+G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  RRHLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEKLLAEIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILEL+EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. ExPASy TrEMBL
Match: A0A5D3BPX3 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00910 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.9e-101
Identity = 200/228 (87.72%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV   STRAQ  K+TP AA +YPS S  TS SHLSLFKSSFFRGQFC RRFLR N + TR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            R +G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  IRRLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK+L+EIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILE++EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. ExPASy TrEMBL
Match: A0A5A7U598 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00030 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 199/228 (87.28%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV   STRAQ  K+TP AA +YPS S  TS SHLSLFKSSFFRGQFC RRFLR N + TR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            R +G+ V+SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  IRRLGN-VISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK+L+EIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILE++EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. ExPASy TrEMBL
Match: A0A1S3BRP8 (nifU-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492775 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 199/228 (87.28%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV   STRAQ  K+TP AA +YPS S  TS SHLSLFKSSFFRGQFC RRFLR N + TR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            R +G+ V+SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  IRRLGN-VISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK+L+EIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILE++EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. NCBI nr
Match: XP_022929559.1 (nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382.9 bits (982), Expect = 2.0e-102
Identity = 203/228 (89.04%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV A STRAQ LK TP  A +Y SPS RTSASHLS FKSSFFRGQFC RRFL  NS+ TR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            RH+G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  RRHLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEKLLAEIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILEL+EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. NCBI nr
Match: XP_022997561.1 (nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382.1 bits (980), Expect = 3.3e-102
Identity = 203/228 (89.04%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV A STRAQ LK TP  A +Y SPS RTSASHLS FKSSFFRGQFC RRFL  NS+ TR
Sbjct: 1   MVAAFSTRAQALKPTPTTAPLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            RH+G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  RRHLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEKLLAEIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILEL+EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. NCBI nr
Match: KAG7029821.1 (NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.1 bits (980), Expect = 3.3e-102
Identity = 203/228 (89.04%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV A STRAQ LK TP  A +Y SPS RTSASHLS FKSSFFRGQFC RRFL  NS+ TR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            RH+G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  RRHLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEKLLAEIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILEL+EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. NCBI nr
Match: XP_038889481.1 (nifU-like protein 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 380.6 bits (976), Expect = 9.7e-102
Identity = 202/228 (88.60%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV A STRA  LK+TP AA +Y SPS  TS SHLSLFK+SFFRGQFC RRFLR NS+ T+
Sbjct: 1   MVAAFSTRAHPLKSTPIAATLYCSPSEPTSPSHLSLFKTSFFRGQFCSRRFLRFNSSCTQ 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            RH+G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  RRHLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK+LAEIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLAEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILE++EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. NCBI nr
Match: TYK01397.1 (nifU-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 200/228 (87.72%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTR 60
           MV   STRAQ  K+TP AA +YPS S  TS SHLSLFKSSFFRGQFC RRFLR N + TR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  TRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120
            R +G+ VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS
Sbjct: 61  IRRLGN-VVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGS 120

Query: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGG 180
           CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK+L+EIRPYLAGTGGG
Sbjct: 121 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGG 180

Query: 181 ILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE 229
           ILE++EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 181 ILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Lcy08g012660 vs. TAIR 10
Match: AT4G25910.1 (NFU domain protein 3 )

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-70
Identity = 142/191 (74.35%), Postives = 163/191 (85.34%), Query Frame = 0


Query: 39  SSFFRGQFCCRRFLRLNSNFTRTRHIGSVVVSPSCVLPLTEENVEKVLDEVRPSLMADGG 98
           S+F RGQF    F  L    TR     +V    SCV+PLTEENVE+VLDEVRPSLMADGG
Sbjct: 48  STFLRGQFQRIHFSWL--QHTRPLRKRTVFGHVSCVMPLTEENVERVLDEVRPSLMADGG 107

Query: 99  NVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTET-GLE 158
           NVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GLE
Sbjct: 108 NVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLE 167

Query: 159 LNEENVEKLLAEIRPYLAGTGGGILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREK 218
           LN+EN+EK+L+E+RPYL+GTGGG LEL+EI  YVVKVRL+GPAAGVMTVRVALTQKLRE 
Sbjct: 168 LNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRET 227

Query: 219 IPAIAAVQLVE 229
           IP+I AVQL+E
Sbjct: 228 IPSIGAVQLLE 236

[Close]

BLAST of Lcy08g012660 vs. TAIR 10
Match: AT5G49940.1 (NIFU-like protein 2 )

HSP 1 Score: 237.7 bits (605), Expect = 9.5e-63
Identity = 130/222 (58.56%), Postives = 163/222 (73.42%), Query Frame = 0


Query: 7   TRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTRTRHIGS 66
           T  Q +  +  ++++ P P   +S   L L        +    RFL     F R++ + +
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVV-SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V    P   +PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELM 186
           MT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EK+L EIRPYL GT  G L+L+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLV 193

Query: 187 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLV 228
           EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQL+
Sbjct: 194 EIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of Lcy08g012660 vs. TAIR 10
Match: AT5G49940.2 (NIFU-like protein 2 )

HSP 1 Score: 151.8 bits (382), Expect = 6.9e-37
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 7   TRAQGLKATPRAAIVYPSPSARTSASHLSLFKSSFFRGQFCCRRFLRLNSNFTRTRHIGS 66
           T  Q +  +  ++++ P P   +S   L L        +    RFL     F R++ + +
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVV-SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V    P   +PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKL 167
           MT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EK+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKV 174

[Close]

BLAST of Lcy08g012660 vs. TAIR 10
Match: AT4G01940.1 (NFU domain protein 1 )

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-19
Identity = 54/141 (38.30%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 77  LTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 136
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 137 RDKIPEIL-EVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELMEIKDYVVKVR 196
           ++K  + L ++ Q+ D E   ++  E V   L  +RP +   GG + E++ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 197 LSGPAAGVMTVRVALTQKLRE 217
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of Lcy08g012660 vs. TAIR 10
Match: AT1G51390.1 (NFU domain protein 5 )

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-08
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 89  VRPSLMADGGNVAL--HEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 148
           +RPS+  DGG++     + +  +V L++QGAC  CPSS++TLK GIE  L   + E+  V
Sbjct: 199 IRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGV 258

Query: 149 EQIMDTE 154
           EQ  D E
Sbjct: 259 EQEFDGE 265

The following BLAST results are available for this feature:

BLAST of Lcy08g012660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84RQ7	3.0e-69	74.35	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2...	[more]
Q93W20	1.3e-61	58.56	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1...	[more]
Q84LK7	3.7e-51	54.75	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=N...	[more]
Q93W77	5.3e-18	38.30	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1...	[more]
P33179	1.4e-15	62.32	Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 ...	[more]

BLAST of Lcy08g012660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP39	9.5e-103	89.04	nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107...	[more]
A0A6J1K7T6	1.6e-102	89.04	nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 P...	[more]
A0A5D3BPX3	8.9e-101	87.72	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G0...	[more]
A0A5A7U598	1.2e-100	87.28	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484...	[more]
A0A1S3BRP8	1.2e-100	87.28	nifU-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492775 PE=3 ...	[more]

BLAST of Lcy08g012660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929559.1	2.0e-102	89.04	nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like ...	[more]
XP_022997561.1	3.3e-102	89.04	nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like ...	[more]
KAG7029821.1	3.3e-102	89.04	NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038889481.1	9.7e-102	88.60	nifU-like protein 3, chloroplastic [Benincasa hispida]	[more]
TYK01397.1	1.8e-100	87.72	nifU-like protein 3 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy08g012660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25910.1	2.1e-70	74.35	NFU domain protein 3	[more]
AT5G49940.1	9.5e-63	58.56	NIFU-like protein 2	[more]
AT5G49940.2	6.9e-37	52.80	NIFU-like protein 2	[more]
AT4G01940.1	3.8e-19	38.30	NFU domain protein 1	[more]
AT1G51390.1	3.9e-08	43.28	NFU domain protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 156..228 e-value: 1.2E-21 score: 78.6
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 74..155 e-value: 3.4E-32 score: 112.3
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 157..227
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 79..154
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 82..147 e-value: 1.9E-26 score: 92.0 coord: 163..225 e-value: 6.1E-12 score: 45.5
None	No IPR available	PANTHER	PTHR11178:SF25	NIFU-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 26..228
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 26..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g012660.1	Lcy08g012660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding