Lcy07g012490 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g012490
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transmembrane E3 ubiquitin-protein ligase 1-like
Location	Chr07: 41662765 .. 41665071 (-)
RNA-Seq Expression	Lcy07g012490
Synteny	Lcy07g012490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTAATTTGCTGATGCAGGGGGTTGTTATTTTTCATGATGTAATTAGTAACGAACATGATGTTGGTGGAGTTCAAATTAAGGTTGAGGGTGTATATATTTGGCCTTTTAGACAGCTCCGGATGGTAGCTAACAGGTAAATTTTCAGTTACTCATCTTTTGACTAAAATAATATCATTCCTTAACTTTGTGTGTATAATTGCCCTCTTCATATTCTCGGTGTGCACTTTTTACAACATTGTGAGGGAGGTGTGCTAAAGGCCATTTCCAATTTCTCTCAGTTCGTCCTCTTTTTACTGTCATTGTTTAGTTTATTATAGTGATGGTTTCTGTGTTATCATGTTGATTGAACCATTAGATCTATTCTATTCTTGTCCTTTGAATATTTACTATAATCATAGTCTCATATTTTCTTTTTACAGTGGAAAGGGAGGAGAATATAGACAAGAAGTTGACAGCATCTTATCCAATCCTTATCATCTGGCAAGACTTTCTCCTTAATTAGAGGATGAATGTTGTTGTTCTTGAAATAAAACATTTCATTTCATCATGTGAATTATCCTTACTGACGAAGCTTCTAAATAACTTCTGAACAGCTTGGAGTTTTCTCCTCCCAGGTGTTCCAAGAATCTCCGCAAGATAAGATGTGGAGAAGAAGCCACTGTAACTTTCTCGCTCTTGGACTTTAACCCACTTTCAATTTTGTTGGTACTGATTTTATCTTTTCTTATTGCAGCACCAATTTATGAAATGGAGAAGCATTGCAATATTGAAATAGCAGCTCAAATATCACATTTCTCTTCTGCACAAAATGGTATTGGATGTTCTGCATATGAGTCGTGCTTTCTTATATGCTGTCTTCTCATAAGGCAATGTTGTGCGTTTGTAGCTATACTTGTTTTGCCCAATATATAATAACTTGCTGTTGGAGAGTATTTACGCAACTTTCCATGGCTAACAGAGAGTTACTTTAGAGAAAATTGGCAAATTTTCATTGTTTCATGAAGCTTAAGTGTTTCATTTCTCATTTTATTATCAACGAGAAACTTTGAGAAAACATTTATAAGCAACTATATCTGGAGGATGAAGTTTCTTTTACATTCTTCCAGAGACATGTTAGCTGGAGAACCTTTGTGGCCGATTACATCCCTTCATTTAGTTCCCTTGTACAATATATATCAGAAGGCAACTACTGTTTGTGGTGTCTTCCAGAAACTTCAAGCATTCTTCCGTTATATCACTCATTACAAAAAAATATATATAAATAAGAGTGACAATGACAATCATGGTTAAGTCTTTGCAGTAGGAGAAGACAAGGTAGAACCTTTAGAATAGCCAAATAGTATGCCTGTTTGTCCCCTCATCACCATGGTCATAGCTGAGTGGGAACATATCTTTCAATACCCCGATGCCCTCTTCCTGTCTTAACCTATATACACCGACCAAAAACAATATATTATATGTGTTTGTTTCCAGTTTCAGTTTTCCTCCACGATCTTAAACAAAACTTCAGCTTTCCAATATCAGGATTGTGACATGACCATGTAAACTTAAATATCAGATTCAGATGCTTCTCTGTCTATTTCTTCAGAATCCCCCATATAATTTCAATAGGAACAATTTTCTTGTCATTTCTCATCCTACGATCAATGTTACAATCATAAACAATTCAATATTACTTGACCTTGTTTCTAGTGCAATAGAGTATATCAATCATGTCTCTGTGAGCCTTAGGCTCATGGGCATAGTCCTTTTGATGCTCAGCCATGTAAAGAATTTAATCAAAACAAAGCCTTATGGGCTATGGAGGATCTTGGAAGCTAAATCAGCACTTGAATGGATGTTCACTAAGTTAAGGAGAGCATAATTTTAACGGGGATTTCTGTAGTAGATTCCTTTATTCTTGACCTTTCCTTGATTCTTAACTTCTCTTGTTATTTGGATTTCTCCTCATGACTTATGTACCTTGCAGTAAATGGAGAACGTGACCATTACCATATCGAAGGATTAATGGAGAGTCCTGCAGTAGACGATGATGGAGATTGTTTTTCACCCTTAGTATTAAATGCCACTTCTGTCAACATCTATCTACTACAACAAAGCAGTGAATTATACCTTGATGGTTACTTTTGTATCCTTTTTTTATGATTTTTGGACTTTTGTCTTACATCTATATATTGAGTCTTCTTTCTCGAAAGAGTAGATTTCCTTATATATTTAAAAACTTAGTTGGATTTCTTAACAAAATTTCATTAGGTCTCTTTCCTTCGAGTACTTCTCTTAATTCGGCAAATGGAACATAG

mRNA sequence

ATGTCTTTTAATTTGCTGATGCAGGGGGTTGTTATTTTTCATGATGTAATTAGTAACGAACATGATGTTGGTGGAGTTCAAATTAAGGTTGAGGGTGTATATATTTGGCCTTTTAGACAGCTCCGGATGGTAGCTAACAGTGGAAAGGGAGGAGAATATAGACAAGAAGTTGACAGCATCTTATCCAATCCTTATCATCTGCTTGGAGTTTTCTCCTCCCAGGTGTTCCAAGAATCTCCGCAAGATAAGATGTGGAGAAGAAGCCACTCACCAATTTATGAAATGGAGAAGCATTGCAATATTGAAATAGCAGCTCAAATATCACATTTCTCTTCTGCACAAAATGTAAATGGAGAACGTGACCATTACCATATCGAAGGATTAATGGAGAGTCCTGCAGTAGACGATGATGGAGATTGTTTTTCACCCTTAGTATTAAATGCCACTTCTGTCAACATCTATCTACTACAACAAAGCAGTGAATTATACCTTGATGGTTACTTTTGTCTCTTTCCTTCGAGTACTTCTCTTAATTCGGCAAATGGAACATAG

Coding sequence (CDS)

ATGTCTTTTAATTTGCTGATGCAGGGGGTTGTTATTTTTCATGATGTAATTAGTAACGAACATGATGTTGGTGGAGTTCAAATTAAGGTTGAGGGTGTATATATTTGGCCTTTTAGACAGCTCCGGATGGTAGCTAACAGTGGAAAGGGAGGAGAATATAGACAAGAAGTTGACAGCATCTTATCCAATCCTTATCATCTGCTTGGAGTTTTCTCCTCCCAGGTGTTCCAAGAATCTCCGCAAGATAAGATGTGGAGAAGAAGCCACTCACCAATTTATGAAATGGAGAAGCATTGCAATATTGAAATAGCAGCTCAAATATCACATTTCTCTTCTGCACAAAATGTAAATGGAGAACGTGACCATTACCATATCGAAGGATTAATGGAGAGTCCTGCAGTAGACGATGATGGAGATTGTTTTTCACCCTTAGTATTAAATGCCACTTCTGTCAACATCTATCTACTACAACAAAGCAGTGAATTATACCTTGATGGTTACTTTTGTCTCTTTCCTTCGAGTACTTCTCTTAATTCGGCAAATGGAACATAG

Protein sequence

MSFNLLMQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYHLLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIEGLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELYLDGYFCLFPSSTSLNSANGT

Homology

[Close]

BLAST of Lcy07g012490 vs. ExPASy Swiss-Prot
Match: Q500V2 (Transmembrane E3 ubiquitin-protein ligase FLY2 OS=Arabidopsis thaliana OX=3702 GN=FLY2 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.4e-58
Identity = 106/147 (72.11%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QG V+FHDV  NEH+VGG QIKVEGVYIWPFRQLR+VANSGK  +   E D +LSNPYH
Sbjct: 109 VQGAVVFHDVFDNEHNVGGAQIKVEGVYIWPFRQLRLVANSGKKSDSGLEDDYLLSNPYH 168

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLG+FSSQVFQESP+D++ ++  SPIYEMEKHCNIEIAAQIS  +S++N NG++D Y IE
Sbjct: 169 LLGIFSSQVFQESPRDRILKQKTSPIYEMEKHCNIEIAAQISQSTSSEN-NGDKDRYQIE 228

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNI 154
           GLMESPAVDD+ DCFSPL LNATS+N+
Sbjct: 229 GLMESPAVDDEVDCFSPLSLNATSINV 254

[Close]

BLAST of Lcy07g012490 vs. ExPASy Swiss-Prot
Match: Q5PP23 (Transmembrane E3 ubiquitin-protein ligase FLY1 OS=Arabidopsis thaliana OX=3702 GN=FLY1 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.6e-57
Identity = 102/147 (69.39%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVV+FHDV  NE +VGG QI +EGVYIWPFRQLR+VANSGK  +  QE +++LSNPYH
Sbjct: 112 VQGVVVFHDVFDNEQNVGGAQINLEGVYIWPFRQLRLVANSGKESDSGQEDNNLLSNPYH 171

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLG+FSSQVFQESP+D++ +R  SP+ EMEKHCNIEIAAQ+S  +S++N NG++++YH+E
Sbjct: 172 LLGIFSSQVFQESPRDRLLKRKLSPVNEMEKHCNIEIAAQVSRVASSEN-NGDKNYYHME 231

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNI 154
           GLMESP V DDGDCFSPL+LNATSVN+
Sbjct: 232 GLMESPGVGDDGDCFSPLLLNATSVNV 257

[Close]

BLAST of Lcy07g012490 vs. ExPASy TrEMBL
Match: A0A6J1D8N7 (transmembrane E3 ubiquitin-protein ligase 1-like OS=Momordica charantia OX=3673 GN=LOC111018054 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 143/157 (91.08%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEHDV GVQIKVEGVYIWPFRQLRMVANSGKGGEY+QEVDSILSNPYH
Sbjct: 119 VQGVVIFHDVIDNEHDVAGVQIKVEGVYIWPFRQLRMVANSGKGGEYKQEVDSILSNPYH 178

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGER+HYHIE
Sbjct: 179 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGEREHYHIE 238

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 239 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 275

[Close]

BLAST of Lcy07g012490 vs. ExPASy TrEMBL
Match: A0A5D3C0M1 (Transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00960 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEH+VGGVQIKVEGVYIWPFRQLRMVANSGKGGE++QEVDSILSNPYH
Sbjct: 172 VQGVVIFHDVIGNEHEVGGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYH 231

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGE DHYHIE
Sbjct: 232 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGEHDHYHIE 291

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 292 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 328

[Close]

BLAST of Lcy07g012490 vs. ExPASy TrEMBL
Match: A0A1S3BJA5 (transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490504 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEH+VGGVQIKVEGVYIWPFRQLRMVANSGKGGE++QEVDSILSNPYH
Sbjct: 120 VQGVVIFHDVIGNEHEVGGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYH 179

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGE DHYHIE
Sbjct: 180 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGEHDHYHIE 239

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 240 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 276

[Close]

BLAST of Lcy07g012490 vs. ExPASy TrEMBL
Match: A0A0A0KGU2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G155550 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 142/157 (90.45%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGE++QEVDSILSNPYH
Sbjct: 120 VQGVVIFHDVIGNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYH 179

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSS QNVNGE DHYHIE
Sbjct: 180 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSPQNVNGEHDHYHIE 239

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 240 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 276

[Close]

BLAST of Lcy07g012490 vs. ExPASy TrEMBL
Match: A0A6J1J691 (transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483834 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.9e-75
Identity = 138/157 (87.90%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEHDVGGVQIK+EGVYIWPFRQLRMVANSGKGGEY+QEVDSILSNPYH
Sbjct: 120 VQGVVIFHDVIGNEHDVGGVQIKIEGVYIWPFRQLRMVANSGKGGEYKQEVDSILSNPYH 179

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQ+ MWRRSHSP YEMEKHCNIEIAAQISH SSAQNVNGE DHYHIE
Sbjct: 180 LLGVFSSQVFQESPQENMWRRSHSPTYEMEKHCNIEIAAQISHSSSAQNVNGEHDHYHIE 239

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLN TSVNI +    +  Y
Sbjct: 240 GLMESPAVDDDGDCFSPLVLNGTSVNIEIYYNKAVNY 276

[Close]

BLAST of Lcy07g012490 vs. NCBI nr
Match: XP_022149687.1 (transmembrane E3 ubiquitin-protein ligase 1-like [Momordica charantia])

HSP 1 Score: 299.3 bits (765), Expect = 2.3e-77
Identity = 143/157 (91.08%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEHDV GVQIKVEGVYIWPFRQLRMVANSGKGGEY+QEVDSILSNPYH
Sbjct: 119 VQGVVIFHDVIDNEHDVAGVQIKVEGVYIWPFRQLRMVANSGKGGEYKQEVDSILSNPYH 178

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGER+HYHIE
Sbjct: 179 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGEREHYHIE 238

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 239 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 275

[Close]

BLAST of Lcy07g012490 vs. NCBI nr
Match: XP_008448263.1 (PREDICTED: transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 5.1e-77
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEH+VGGVQIKVEGVYIWPFRQLRMVANSGKGGE++QEVDSILSNPYH
Sbjct: 120 VQGVVIFHDVIGNEHEVGGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYH 179

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGE DHYHIE
Sbjct: 180 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGEHDHYHIE 239

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 240 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 276

[Close]

BLAST of Lcy07g012490 vs. NCBI nr
Match: TYK04895.1 (transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 5.1e-77
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEH+VGGVQIKVEGVYIWPFRQLRMVANSGKGGE++QEVDSILSNPYH
Sbjct: 172 VQGVVIFHDVIGNEHEVGGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYH 231

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGE DHYHIE
Sbjct: 232 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGEHDHYHIE 291

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 292 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 328

[Close]

BLAST of Lcy07g012490 vs. NCBI nr
Match: XP_004149272.1 (transmembrane E3 ubiquitin-protein ligase FLY2 isoform X2 [Cucumis sativus] >KGN46976.1 hypothetical protein Csa_020747 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 6.7e-77
Identity = 142/157 (90.45%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGE++QEVDSILSNPYH
Sbjct: 120 VQGVVIFHDVIGNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYH 179

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSS QNVNGE DHYHIE
Sbjct: 180 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSPQNVNGEHDHYHIE 239

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPLVLNATSVNI +    +  Y
Sbjct: 240 GLMESPAVDDDGDCFSPLVLNATSVNIEIYYNKAVNY 276

[Close]

BLAST of Lcy07g012490 vs. NCBI nr
Match: XP_038901005.1 (transmembrane E3 ubiquitin-protein ligase FLY2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 297.4 bits (760), Expect = 8.7e-77
Identity = 142/157 (90.45%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVVIFHDVI NEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEY+QEVDSILSNPYH
Sbjct: 119 VQGVVIFHDVIGNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYKQEVDSILSNPYH 178

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQIS+FSSAQNVNGE DHYHIE
Sbjct: 179 LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISYFSSAQNVNGEHDHYHIE 238

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNIYLLQQSSELY 164
           GLMESPAVDDDGDCFSPL LNATSVNI +    +  Y
Sbjct: 239 GLMESPAVDDDGDCFSPLALNATSVNIEIYYNKAVNY 275

[Close]

BLAST of Lcy07g012490 vs. TAIR 10
Match: AT2G20650.1 (RING/U-box superfamily protein )

HSP 1 Score: 224.6 bits (571), Expect = 6.7e-59
Identity = 106/147 (72.11%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QG V+FHDV  NEH+VGG QIKVEGVYIWPFRQLR+VANSGK  +   E D +LSNPYH
Sbjct: 109 VQGAVVFHDVFDNEHNVGGAQIKVEGVYIWPFRQLRLVANSGKKSDSGLEDDYLLSNPYH 168

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLG+FSSQVFQESP+D++ ++  SPIYEMEKHCNIEIAAQIS  +S++N NG++D Y IE
Sbjct: 169 LLGIFSSQVFQESPRDRILKQKTSPIYEMEKHCNIEIAAQISQSTSSEN-NGDKDRYQIE 228

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNI 154
           GLMESPAVDD+ DCFSPL LNATS+N+
Sbjct: 229 GLMESPAVDDEVDCFSPLSLNATSINV 254

[Close]

BLAST of Lcy07g012490 vs. TAIR 10
Match: AT2G20650.2 (RING/U-box superfamily protein )

HSP 1 Score: 224.6 bits (571), Expect = 6.7e-59
Identity = 106/147 (72.11%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QG V+FHDV  NEH+VGG QIKVEGVYIWPFRQLR+VANSGK  +   E D +LSNPYH
Sbjct: 109 VQGAVVFHDVFDNEHNVGGAQIKVEGVYIWPFRQLRLVANSGKKSDSGLEDDYLLSNPYH 168

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLG+FSSQVFQESP+D++ ++  SPIYEMEKHCNIEIAAQIS  +S++N NG++D Y IE
Sbjct: 169 LLGIFSSQVFQESPRDRILKQKTSPIYEMEKHCNIEIAAQISQSTSSEN-NGDKDRYQIE 228

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNI 154
           GLMESPAVDD+ DCFSPL LNATS+N+
Sbjct: 229 GLMESPAVDDEVDCFSPLSLNATSINV 254

[Close]

BLAST of Lcy07g012490 vs. TAIR 10
Match: AT4G28370.1 (RING/U-box superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-58
Identity = 102/147 (69.39%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 7   MQGVVIFHDVISNEHDVGGVQIKVEGVYIWPFRQLRMVANSGKGGEYRQEVDSILSNPYH 66
           +QGVV+FHDV  NE +VGG QI +EGVYIWPFRQLR+VANSGK  +  QE +++LSNPYH
Sbjct: 112 VQGVVVFHDVFDNEQNVGGAQINLEGVYIWPFRQLRLVANSGKESDSGQEDNNLLSNPYH 171

Query: 67  LLGVFSSQVFQESPQDKMWRRSHSPIYEMEKHCNIEIAAQISHFSSAQNVNGERDHYHIE 126
           LLG+FSSQVFQESP+D++ +R  SP+ EMEKHCNIEIAAQ+S  +S++N NG++++YH+E
Sbjct: 172 LLGIFSSQVFQESPRDRLLKRKLSPVNEMEKHCNIEIAAQVSRVASSEN-NGDKNYYHME 231

Query: 127 GLMESPAVDDDGDCFSPLVLNATSVNI 154
           GLMESP V DDGDCFSPL+LNATSVN+
Sbjct: 232 GLMESPGVGDDGDCFSPLLLNATSVNV 257

The following BLAST results are available for this feature:

BLAST of Lcy07g012490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500V2	9.4e-58	72.11	Transmembrane E3 ubiquitin-protein ligase FLY2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q5PP23	3.6e-57	69.39	Transmembrane E3 ubiquitin-protein ligase FLY1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lcy07g012490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8N7	1.1e-77	91.08	transmembrane E3 ubiquitin-protein ligase 1-like OS=Momordica charantia OX=3673 ...	[more]
A0A5D3C0M1	2.5e-77	90.45	Transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 OS=Cucumis melo var....	[more]
A0A1S3BJA5	2.5e-77	90.45	transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 OS=Cucumis melo OX=3...	[more]
A0A0A0KGU2	3.2e-77	90.45	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G155550 P...	[more]
A0A6J1J691	3.9e-75	87.90	transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 OS=Cucurbita maxima ...	[more]

BLAST of Lcy07g012490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149687.1	2.3e-77	91.08	transmembrane E3 ubiquitin-protein ligase 1-like [Momordica charantia]	[more]
XP_008448263.1	5.1e-77	90.45	PREDICTED: transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 [Cucumis ...	[more]
TYK04895.1	5.1e-77	90.45	transmembrane E3 ubiquitin-protein ligase 1-like isoform X2 [Cucumis melo var. m...	[more]
XP_004149272.1	6.7e-77	90.45	transmembrane E3 ubiquitin-protein ligase FLY2 isoform X2 [Cucumis sativus] >KGN...	[more]
XP_038901005.1	8.7e-77	90.45	transmembrane E3 ubiquitin-protein ligase FLY2-like isoform X2 [Benincasa hispid...	[more]

BLAST of Lcy07g012490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20650.1	6.7e-59	72.11	RING/U-box superfamily protein	[more]
AT2G20650.2	6.7e-59	72.11	RING/U-box superfamily protein	[more]
AT4G28370.1	2.5e-58	69.39	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22763:SF170	TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE	coord: 7..155
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 7..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g012490.1	Lcy07g012490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding