Lcy07g006980 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g006980
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr07: 33483436 .. 33484014 (-)
RNA-Seq Expression	Lcy07g006980
Synteny	Lcy07g006980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTCGGCGTGGAGAGTTCACAATGCGACAGGTGTGGAGCCGGCTAGAGAGAATGTCTTTGTAATTCAGTTTCGTACCAGGGGTGAAAAGTTGAGAGTTATAGGTACTGGTCCTTGGGCCTTTGACCGGTCCCTGGTTGTGCTTAAGGAACCAAGGGATGTTGCGTCGGTGCTGGAAACAGAGTTTAGTGATTGTCCTTTCTGGGTACAAATTCATAATGTCCCTATGAAGTGGCAGACGAGGGGCATGGTGCAACATCTGGGAGGAAAGATTGGGGTGGTCGAGGAAGTGGGAGGTTCAAATGAGAATGATTGGATAGGTCCTATCCTGTGGATTAGAGTTCGTAGTCGGTTGGACCGACCACTCCGAAGGGGTTTCCATATGCAGAACGATGATGGGAAGGATTCTTGGTGTCCAGTGTTGTATGAGCGACTCCCGGATTTCTGTTATGGATGTGGATGTTTAGGTCACTCGAGACGGAAATGTGAGGGTGTGGGGGCGAGTTCTTCGGGAGTGGGAGAGGATCAATATGGTGAGTGGCTGAGAGCTGGTGTTGTTCTTGGGGAGAGTATCTGA

mRNA sequence

ATGCGGTCGGCGTGGAGAGTTCACAATGCGACAGGTGTGGAGCCGGCTAGAGAGAATGTCTTTGTAATTCAGTTTCGTACCAGGGGTGAAAAGTTGAGAGTTATAGGTACTGGTCCTTGGGCCTTTGACCGGTCCCTGGTTGTGCTTAAGGAACCAAGGGATGTTGCGTCGGTGCTGGAAACAGAGTTTAGTGATTGTCCTTTCTGGGTACAAATTCATAATGTCCCTATGAAGTGGCAGACGAGGGGCATGGTGCAACATCTGGGAGGAAAGATTGGGGTGGTCGAGGAAGTGGGAGGTTCAAATGAGAATGATTGGATAGGTCCTATCCTGTGGATTAGAGTTCGTAGTCGGTTGGACCGACCACTCCGAAGGGGTTTCCATATGCAGAACGATGATGGGAAGGATTCTTGGTGTCCAGTGTTGTATGAGCGACTCCCGGATTTCTGTTATGGATGTGGATGTTTAGGTCACTCGAGACGGAAATGTGAGGGTGTGGGGGCGAGTTCTTCGGGAGTGGGAGAGGATCAATATGGTGAGTGGCTGAGAGCTGGTGTTGTTCTTGGGGAGAGTATCTGA

Coding sequence (CDS)

ATGCGGTCGGCGTGGAGAGTTCACAATGCGACAGGTGTGGAGCCGGCTAGAGAGAATGTCTTTGTAATTCAGTTTCGTACCAGGGGTGAAAAGTTGAGAGTTATAGGTACTGGTCCTTGGGCCTTTGACCGGTCCCTGGTTGTGCTTAAGGAACCAAGGGATGTTGCGTCGGTGCTGGAAACAGAGTTTAGTGATTGTCCTTTCTGGGTACAAATTCATAATGTCCCTATGAAGTGGCAGACGAGGGGCATGGTGCAACATCTGGGAGGAAAGATTGGGGTGGTCGAGGAAGTGGGAGGTTCAAATGAGAATGATTGGATAGGTCCTATCCTGTGGATTAGAGTTCGTAGTCGGTTGGACCGACCACTCCGAAGGGGTTTCCATATGCAGAACGATGATGGGAAGGATTCTTGGTGTCCAGTGTTGTATGAGCGACTCCCGGATTTCTGTTATGGATGTGGATGTTTAGGTCACTCGAGACGGAAATGTGAGGGTGTGGGGGCGAGTTCTTCGGGAGTGGGAGAGGATCAATATGGTGAGTGGCTGAGAGCTGGTGTTGTTCTTGGGGAGAGTATCTGA

Protein sequence

MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLETEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLDRPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCEGVGASSSGVGEDQYGEWLRAGVVLGESI

Homology

[Close]

BLAST of Lcy07g006980 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.9e-50
Identity = 87/184 (47.28%), Postives = 121/184 (65.76%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           M+S WRVHN+T  EP   N++VI F++  EK RV+ +GPW F++SL+VL  P      L+
Sbjct: 58  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 117

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
             F+ C FW+QIHN+P +  +  M   LG K+G VEE+ G   + W GP + +RV+  + 
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVS 177

Query: 121 RPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCEGVGASSSGVGEDQYGE 180
           +PLRRG  ++N DGKD WCP+ YE+LPDFCY CG +GHS R+CE      +    +QYG+
Sbjct: 178 KPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGD 237

Query: 181 WLRA 185
           WLRA
Sbjct: 238 WLRA 241

[Close]

BLAST of Lcy07g006980 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.7e-47
Identity = 80/164 (48.78%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           M+  W++HN+T +E A  N++VI F+T  EK+RV   GPW FD+SL++L         L+
Sbjct: 58  MKQVWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLD 117

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
            + S C FWVQIH +  +  T+ M + LG ++G VEEV G +  DW+ P LW+RV+  + 
Sbjct: 118 IDISLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVL 177

Query: 121 RPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCE 165
           +PLRRG  ++  DGKD WCP+ YERLPDFCYGCGC+GHS R+ E
Sbjct: 178 KPLRRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYE 221

[Close]

BLAST of Lcy07g006980 vs. ExPASy TrEMBL
Match: A0A5C7IBW4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007497 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-30
Identity = 66/186 (35.48%), Postives = 105/186 (56.45%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           MR  W+  +   +E  ++N+F   F+   +K ++I  GPW+F+ +L+V++EP     ++ 
Sbjct: 61  MRKIWKTRDEVEIEALKDNIFAFHFQNPDDKRKIISGGPWSFNDALIVMEEPEGKGDIIH 120

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
            +F+   FW+QIHNVPM   T+ +   LG  +G V EV   +   +    L +RV   +D
Sbjct: 121 MQFTKVEFWIQIHNVPMLCMTKDIGCFLGTIVGEVVEVDEGDTGSYTAKFLRVRVILEID 180

Query: 121 RPLRRGFHMQ-NDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKC-EGVGASSSGVGED-Q 180
           +PLRR   +    DG +S   + YERLPDFC+ CG +GHS + C E    +  G+ ED  
Sbjct: 181 KPLRRCLRIDVMGDGVESVMLLKYERLPDFCFRCGLIGHSVKDCPEKAMVAGKGMKEDFI 240

Query: 181 YGEWLR 184
           +G W+R
Sbjct: 241 FGSWMR 246

[Close]

BLAST of Lcy07g006980 vs. ExPASy TrEMBL
Match: A0A5C7HYU7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013716 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 71/183 (38.80%), Postives = 101/183 (55.19%), Query Frame = 0


Query: 5   WRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLETEFS 64
           W+V  +  +E  RENVF   F+ + ++ RV+  GPW+FD  L+VL  P     +L   F+
Sbjct: 52  WKVRESITIEMVRENVFTFHFQNQNDRRRVLTRGPWSFDNFLIVLAIPNGKGDILNMPFN 111

Query: 65  DCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLDRPLR 124
              FWVQIHNV +   T+ +   LG  IG VEE+      D  G  L +RV   +D+PLR
Sbjct: 112 RAAFWVQIHNVSLLCMTKQIGHFLGSLIGDVEEIDEGASGDCDGKFLRVRVTIPVDQPLR 171

Query: 125 RGFHMQ-NDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCEGVGASSSGVGEDQYGEWLR 184
           R   +    DG++S   + YERLPD C+ CG LGH   +C   GAS+  +    +G WL+
Sbjct: 172 RILRVDVLGDGEESVILLRYERLPDHCHKCGKLGHKTIECTTAGASTDLL----FGAWLK 230

Query: 185 AGV 187
            G+
Sbjct: 232 VGI 230

[Close]

BLAST of Lcy07g006980 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.1e-30
Identity = 70/184 (38.04%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 4   AWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLETEF 63
           AW+V +   VE   +N+F+  F    +  RV+ TGPW FD++L+VL++P    ++ E EF
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 64  SDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLDRPL 123
           +   FW+ + ++PM W  + M   LG  IG   +V  + +    G  L IRV   + +PL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 124 RRGFHMQNDDGK--DSWCPVLYERLPDFCYGCGCLGHSRRKCEG--VGASSSGVGEDQYG 183
           RRG  + N DG     W P+ YERLPDFCY CG +GHS   C+   + A        +YG
Sbjct: 184 RRGIKI-NIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYG 243

[Close]

BLAST of Lcy07g006980 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-49
Identity = 87/184 (47.28%), Postives = 121/184 (65.76%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           M+S WRVHN+T  EP   N++VI F++  EK RV+ +GPW F++SL+VL  P      L+
Sbjct: 58  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 117

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
             F+ C FW+QIHN+P +  +  M   LG K+G VEE+ G   + W GP + +RV+  + 
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVS 177

Query: 121 RPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCEGVGASSSGVGEDQYGE 180
           +PLRRG  ++N DGKD WCP+ YE+LPDFCY CG +GHS R+CE      +    +QYG+
Sbjct: 178 KPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGD 237

Query: 181 WLRA 185
           WLRA
Sbjct: 238 WLRA 241

[Close]

BLAST of Lcy07g006980 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-47
Identity = 80/164 (48.78%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           M+  W++HN+T +E A  N++VI F+T  EK+RV   GPW FD+SL++L         L+
Sbjct: 58  MKQVWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLD 117

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
            + S C FWVQIH +  +  T+ M + LG ++G VEEV G +  DW+ P LW+RV+  + 
Sbjct: 118 IDISLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVL 177

Query: 121 RPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCE 165
           +PLRRG  ++  DGKD WCP+ YERLPDFCYGCGC+GHS R+ E
Sbjct: 178 KPLRRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYE 221

[Close]

BLAST of Lcy07g006980 vs. NCBI nr
Match: XP_024033132.1 (uncharacterized protein LOC112095437 [Citrus clementina])

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-34
Identity = 69/182 (37.91%), Postives = 110/182 (60.44%), Query Frame = 0


Query: 4   AWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLETEF 63
           AWR  +   VE    N+FV +F +  +K RV   GPW FDR+L+VL+EP+ + S+ +  F
Sbjct: 63  AWRTVHDFKVESLGSNIFVFKFLSEADKKRVFNGGPWHFDRALMVLQEPKGIGSIKKQSF 122

Query: 64  SDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLDRPL 123
           S   FW++IHNVP+      +++ LG ++G VE++G   + +  G  + I+V   + +PL
Sbjct: 123 SHVSFWIRIHNVPLMCMDTSIIRELGSRVGKVEDIGMDAQGECFGEFVRIQVSVNITKPL 182

Query: 124 RRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKC-EGVGASSSGVGEDQYGEWL 183
           ++   ++ +D +D   PV+YERLPDFC+ CGC+GH  R+C E  G     +    +G WL
Sbjct: 183 KKLIVLKQEDDEDIPLPVVYERLPDFCFCCGCIGHQFRECMEYKGQQKENL---PFGPWL 241

Query: 184 RA 185
           +A
Sbjct: 243 KA 241

[Close]

BLAST of Lcy07g006980 vs. NCBI nr
Match: XP_015388532.1 (uncharacterized protein LOC107178176 [Citrus sinensis])

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-34
Identity = 69/184 (37.50%), Postives = 109/184 (59.24%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           M+ AWR    T VE   +N+F+ +F ++ EK R++  GPW FDRSL+V+ EP  +  V +
Sbjct: 60  MQQAWRTTKETKVESLGDNIFIFKFASKSEKKRILFGGPWHFDRSLMVVTEPMGIGDVKK 119

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
            +F+  PFWVQIHN+P+    + ++Q +GG+IG V+EV   +  + +G  + IR+   + 
Sbjct: 120 QDFTHAPFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVKTYDVGECMGSFVRIRIMVNVT 179

Query: 121 RPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCEGVGASSSGVGEDQYGE 180
            PL +   ++ +DG      + YE+LPDFC+ CG +GH  R+C      S    +  YG 
Sbjct: 180 MPLPKRLLLKLEDGGQISLRIAYEKLPDFCFCCGLIGHQYRECLDYKGQSK--DDLTYGA 239

Query: 181 WLRA 185
           W+RA
Sbjct: 240 WMRA 241

[Close]

BLAST of Lcy07g006980 vs. NCBI nr
Match: XP_006485824.1 (uncharacterized protein LOC102613298 [Citrus sinensis])

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-33
Identity = 68/184 (36.96%), Postives = 109/184 (59.24%), Query Frame = 0


Query: 1   MRSAWRVHNATGVEPARENVFVIQFRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLE 60
           M+ AWR    T VE   +N+F+ +F ++ EK R++  GPW FDRSL+V+ EP  +  V +
Sbjct: 60  MQQAWRTTKETKVESLGDNIFLFKFASKSEKKRILFGGPWHFDRSLMVVIEPMGIGDVKK 119

Query: 61  TEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLD 120
            +F+   FWVQIHN+P+    + ++Q +GG+IG V+EV   +  + +G  + +R+   + 
Sbjct: 120 QDFTHALFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGSFVRVRIMVNVT 179

Query: 121 RPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGCGCLGHSRRKCEGVGASSSGVGEDQYGE 180
           RPL +   ++ +DG      + YE+LPDFC+ CG +GH  R+C      S    +  YG 
Sbjct: 180 RPLPKRLLLKLEDGGQISLRIAYEKLPDFCFCCGLIGHQFRECLDYKGQSK--DDLTYGA 239

Query: 181 WLRA 185
           W+RA
Sbjct: 240 WMRA 241

[Close]

BLAST of Lcy07g006980 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 40/130 (30.77%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 34  VIGTGPWAFDRSLVVLKEPRDVASVLETEFSDCPFWVQIHNVPMKWQTRGMVQHLGGKIG 93
           V+  GPWAF+  +++L+       +    F   PFWVQI  +P ++  RG+V+H+G  +G
Sbjct: 186 VLRRGPWAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALG 245

Query: 94  VVEEVGGSNENDWIGPILWIRVRSRLDRPLRRGFHMQNDDGKDSWCPVLYERLPDFCYGC 153
            V +   + E         + +   +  PLR   H Q   G ++     YERL  FC  C
Sbjct: 246 QVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLRFRYERLRGFCEVC 305

Query: 154 GCLGHSRRKC 164
           G L H    C
Sbjct: 306 GMLTHDFGAC 311

[Close]

BLAST of Lcy07g006980 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-08
Identity = 34/153 (22.22%), Postives = 61/153 (39.87%), Query Frame = 0


Query: 25  FRTRGEKLRVIGTGPWAFDRSLVVLKEPRDVASVLETEFSDCPFWVQIHNVPMKWQTRGM 84
           F++      ++  GPW+F+  + V++    + S  + EF   PFW+QI  +P+++ T  +
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQRWTKLHS--DAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 85  VQHLGGKIGVVEEVGGSNENDWIGPILWIRVRSRLDRPLRRGFHMQNDDGKD-SWCPVLY 144
           +  +G                                  R G  ++ + G+D S     Y
Sbjct: 126 ITSIGE---------------------------------RMGLFLETNLGRDVSVLKFQY 183

Query: 145 ERLPDFCYGCGCLGHSRRKCEGVGASSSGVGED 177
           E+L +FC  CG L H   +C   G       +D
Sbjct: 186 EKLKNFCTTCGMLSHDASECPTSGNQGPHADDD 183

The following BLAST results are available for this feature:

BLAST of Lcy07g006980 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g006980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	7.9e-50	47.28	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DVS4	3.7e-47	48.78	uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5C7IBW4	1.4e-30	35.48	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00749...	[more]
A0A5C7HYU7	1.8e-30	38.80	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01371...	[more]
A0A6J1DU55	4.1e-30	38.04	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Lcy07g006980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	1.6e-49	47.28	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_022156711.1	7.5e-47	48.78	uncharacterized protein LOC111023555 [Momordica charantia]	[more]
XP_024033132.1	1.5e-34	37.91	uncharacterized protein LOC112095437 [Citrus clementina]	[more]
XP_015388532.1	1.9e-34	37.50	uncharacterized protein LOC107178176 [Citrus sinensis]	[more]
XP_006485824.1	1.2e-33	36.96	uncharacterized protein LOC102613298 [Citrus sinensis]	[more]

BLAST of Lcy07g006980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G31430.1	1.3e-12	30.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42140.1	2.5e-08	22.22	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 1..104 e-value: 2.3E-11 score: 43.4
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 121..164 e-value: 2.3E-15 score: 56.0
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 13..164
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 13..164
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 150..163 score: 8.729682

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g006980.1	Lcy07g006980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding