Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGGGAAGAAGTTGCTGGAAAAGGGGGTTCGTTGGAGGATTGGGAATGGAGAAAGGGTAAGTGTGTACGGATCCAGCTGGGTTCCATGTGATACGAACCTGAGGATTGCTTCACCGATGACATTACAGCCTGATGCTAGAGTGAGGGACTTGTTTACGGCGTCAGGGCATTGGAATGAGACCCTTATTCGGCAACACTTTAGCCCTCAAGAGGCAAGGTACATTCTTTCTATTCCCCTACGCCAGGTTGCTTGTGAGGATGTCGTCATTTGGCACTTTGAGAAGTCGGGGCTATATTCAGTAAAGAGTGGTTATCGGGTTGGCCAAGGTCCTCTATTGGCCCGAAGCCCCTCATCTTCGTCTCTAGAGTTAATACATAAATGGTGGAATGACTGCTGGAATATGAGGATGCCAAGCAAGATTAAGATATTTTTTTGGAGGTTGTATTTAGATCGGCTGCCCATGATGGATAATTTGTGCAGACGGGGGGGGGGGGGGGGTGGACTCACCGAACGTATGTGTGTGCTGTGGTAGGATGGGGGAGTCGAGTCTCCACCTGTTCTGGCATTGTAAGCATACGAAGGAGATTATGTGGTCTGCAGGGTTTGGGGCTATTTTGTCCAGATGCAAGGCAGACGACATTAAGTTCCTCCTCCGAGATGTAAAGGATGAGTTGGAGTGGGATCGGTTTGAGGAATGGGTGGTGTTATTATGGGCCATCTGGTACAGGCGGAATGAAATGAGGCAGGGGAAGGAGGTCTCGATGGCGAATCTGGCAGATTGGGTGGTTGGGTATCTGAACGCATTCCGTGATTCGGGGAGGGGGGAGATGGATCTGTTGGGGGGAAGTCCTAGTCGGGCGGTTTACAGGTGGGCGCCGCCAGAGGCTGATGGGTTCAAGGTGAATGTTGATGCGGCCTTTTGTCGGGTGAGCGGAACAGCAGGTGTAGGCGTGGTATGTCGAGATTCTTGGGGGCAGGTGGGTTTCGCAGCTACGGCCTTCTATGAGAATATCAGAGATGCTGACTTTGCAGAAGGTTTGGGGGCTGCTGTCGGCCTGAGACTTGCTGTGGAGACGGCTACTCGACCTTTTGTACTAGAGACTGACTCTATGCGGGTATTCAAGCTGCTACAGCGGGATAGGGAGGAGGTGTCGGAGTTGGGGATGTTGGTGGAGGATGCGGTGAGGGGTGTCCCAGCAGGGTGGTTTATCGGCGGCAACTTTACGTTCAGGGAAGGCAACTGCGTTGCCCATCGTTTGGCAAGGTTGGCGATGGAGGACACATGTGACCGAGTGTGGATGGAAGAAGGCCCTTCATGTGTTTTGGGCTTGTTGGCTGAAGAGGGAGTGCATGAGTTTCCCCAGGCGAGGAGGGGAGGGTGA
mRNA sequence
ATGTGGGGGAAGAAGTTGCTGGAAAAGGGGGTTCGTTGGAGGATTGGGAATGGAGAAAGGGTAAGTGTGTACGGATCCAGCTGGGTTCCATGTGATACGAACCTGAGGATTGCTTCACCGATGACATTACAGCCTGATGCTAGAGTGAGGGACTTGTTTACGGCGTCAGGGCATTGGAATGAGACCCTTATTCGGCAACACTTTAGCCCTCAAGAGGCAAGGTACATTCTTTCTATTCCCCTACGCCAGGTTGCTTGTGAGGATGTCGTCATTTGGCACTTTGAGAAGTCGGGGCTATATTCAGTAAAGAGTGGTTATCGGGTTGGCCAAGGTCCTCTATTGGCCCGAAGCCCCTCATCTTCGTCTCTAGAGTTAATACATAAATGGTGGAATGACTGCTGGAATATGAGGATGCCAAGCAAGATTAAGATATTTTTTTGGAGGATGGGGGAGTCGAGTCTCCACCTGTTCTGGCATTGTAAGCATACGAAGGAGATTATGTGGTCTGCAGGGTTTGGGGCTATTTTGTCCAGATGCAAGGCAGACGACATTAAGTTCCTCCTCCGAGATGTAAAGGATGAGTTGGAGTGGGATCGGTTTGAGGAATGGGTGGTGTTATTATGGGCCATCTGGTACAGGCGGAATGAAATGAGGCAGGGGAAGGAGGTCTCGATGGCGAATCTGGCAGATTGGGTGGTTGGGTATCTGAACGCATTCCGTGATTCGGGGAGGGGGGAGATGGATCTGTTGGGGGGAAGTCCTAGTCGGGCGGTTTACAGGTGGGCGCCGCCAGAGGCTGATGGGTTCAAGGTGAATGTTGATGCGGCCTTTTGTCGGGTGAGCGGAACAGCAGGTGTAGGCGTGGTATGTCGAGATTCTTGGGGGCAGGTGGGTTTCGCAGCTACGGCCTTCTATGAGAATATCAGAGATGCTGACTTTGCAGAAGGTTTGGGGGCTGCTGTCGGCCTGAGACTTGCTGTGGAGACGGCTACTCGACCTTTTGTACTAGAGACTGACTCTATGCGGGTATTCAAGCTGCTACAGCGGGATAGGGAGGAGGTGTCGGAGTTGGGGATGTTGGTGGAGGATGCGGTGAGGGGTGTCCCAGCAGGGTGGTTTATCGGCGGCAACTTTACGTTCAGGGAAGGCAACTGCGTTGCCCATCGTTTGGCAAGGTTGGCGATGGAGGACACATGTGACCGAGTGTGGATGGAAGAAGGCCCTTCATGTGTTTTGGGCTTGTTGGCTGAAGAGGGAGTGCATGAGTTTCCCCAGGCGAGGAGGGGAGGGTGA
Coding sequence (CDS)
ATGTGGGGGAAGAAGTTGCTGGAAAAGGGGGTTCGTTGGAGGATTGGGAATGGAGAAAGGGTAAGTGTGTACGGATCCAGCTGGGTTCCATGTGATACGAACCTGAGGATTGCTTCACCGATGACATTACAGCCTGATGCTAGAGTGAGGGACTTGTTTACGGCGTCAGGGCATTGGAATGAGACCCTTATTCGGCAACACTTTAGCCCTCAAGAGGCAAGGTACATTCTTTCTATTCCCCTACGCCAGGTTGCTTGTGAGGATGTCGTCATTTGGCACTTTGAGAAGTCGGGGCTATATTCAGTAAAGAGTGGTTATCGGGTTGGCCAAGGTCCTCTATTGGCCCGAAGCCCCTCATCTTCGTCTCTAGAGTTAATACATAAATGGTGGAATGACTGCTGGAATATGAGGATGCCAAGCAAGATTAAGATATTTTTTTGGAGGATGGGGGAGTCGAGTCTCCACCTGTTCTGGCATTGTAAGCATACGAAGGAGATTATGTGGTCTGCAGGGTTTGGGGCTATTTTGTCCAGATGCAAGGCAGACGACATTAAGTTCCTCCTCCGAGATGTAAAGGATGAGTTGGAGTGGGATCGGTTTGAGGAATGGGTGGTGTTATTATGGGCCATCTGGTACAGGCGGAATGAAATGAGGCAGGGGAAGGAGGTCTCGATGGCGAATCTGGCAGATTGGGTGGTTGGGTATCTGAACGCATTCCGTGATTCGGGGAGGGGGGAGATGGATCTGTTGGGGGGAAGTCCTAGTCGGGCGGTTTACAGGTGGGCGCCGCCAGAGGCTGATGGGTTCAAGGTGAATGTTGATGCGGCCTTTTGTCGGGTGAGCGGAACAGCAGGTGTAGGCGTGGTATGTCGAGATTCTTGGGGGCAGGTGGGTTTCGCAGCTACGGCCTTCTATGAGAATATCAGAGATGCTGACTTTGCAGAAGGTTTGGGGGCTGCTGTCGGCCTGAGACTTGCTGTGGAGACGGCTACTCGACCTTTTGTACTAGAGACTGACTCTATGCGGGTATTCAAGCTGCTACAGCGGGATAGGGAGGAGGTGTCGGAGTTGGGGATGTTGGTGGAGGATGCGGTGAGGGGTGTCCCAGCAGGGTGGTTTATCGGCGGCAACTTTACGTTCAGGGAAGGCAACTGCGTTGCCCATCGTTTGGCAAGGTTGGCGATGGAGGACACATGTGACCGAGTGTGGATGGAAGAAGGCCCTTCATGTGTTTTGGGCTTGTTGGCTGAAGAGGGAGTGCATGAGTTTCCCCAGGCGAGGAGGGGAGGGTGA
Protein sequence
MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWNETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLARSPSSSSLELIHKWWNDCWNMRMPSKIKIFFWRMGESSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIWYRRNEMRQGKEVSMANLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAHRLARLAMEDTCDRVWMEEGPSCVLGLLAEEGVHEFPQARRGG
Homology
BLAST of Lcy06g016400 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 1.0e-65
Identity = 156/458 (34.06%), Postives = 225/458 (49.13%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFT-ASGHW 60
+WG+ LL+KG+RWRIGNG+ V +YG +WVP L+I S L +RV L G W
Sbjct: 705 LWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGW 764
Query: 61 NETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVG--QGPLLARS 120
++R F+P EA+ ILSIP+ + A ED +IW++EK+G+YSV+SGY+V P + ++
Sbjct: 765 QGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCV-QA 824
Query: 121 PSSSSLELIHKWWNDCWNMRMPSKIKIFFWRM---------------------------- 180
PSSSS E + WWN W M +P+KIK+F WR+
Sbjct: 825 PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRN 884
Query: 181 GESSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWA 240
GE S+HLFW CK + + ++ FG + +LR+ + L FEE V++W
Sbjct: 885 GEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVIWG 944
Query: 241 IWYRRNEMRQGKEVSMA-----NLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPP 300
+W +RN L +W Y FR++ + G + A W PP
Sbjct: 945 LWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSN--PITGRVTNTAEILWQPP 1004
Query: 301 EADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLR 360
+ +K+N DA+F AG+G++ + GQV AAT + ENI+ D AE + A GL+
Sbjct: 1005 DEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQ 1064
Query: 361 LAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGN 420
LA E P + E++SE G +V A NF REGN
Sbjct: 1065 LASEIGMHPAL----------------EDLSETGEIVLKAKNFWTQSLHASFNFVKREGN 1124
Query: 421 CVAHRLARLAMEDTCDRVWMEEGPSCVLGLLAEEGVHE 423
AH LAR A+ +WME+ P + L E + E
Sbjct: 1125 KAAHMLARRALLLHEFSIWMEDWPLELKSCLEMECLEE 1136
BLAST of Lcy06g016400 vs. ExPASy TrEMBL
Match:
A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 1.0e-57
Identity = 140/459 (30.50%), Postives = 211/459 (45.97%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWN 60
+WGKK+++KG RWRIG G V V W+P +I L V DL +G W+
Sbjct: 1337 VWGKKIIQKGYRWRIGYGNSVRVLEDPWLPRPVTFKIYDKPPLPDQLYVIDLKKINGEWD 1396
Query: 61 ETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLARSPSS 120
E +R F+P +A IL +P + ED V+WH+ K G YSV+SGYR+ L
Sbjct: 1397 EEFVRAVFNPTDADLILRMPTSEWDIEDKVLWHYSKDGEYSVRSGYRMAAA--LQVRDVQ 1456
Query: 121 SSLELIHKWWNDCWNMRMPSKIKIFFWRMGESSL-------------------------- 180
S E+ KWW W +++P K+K F W++ S L
Sbjct: 1457 SDTEVTEKWWRLLWKLKIPPKVKHFVWKLAHSWLPTNAVLARRNIPVEPYCNRCFNGVYE 1516
Query: 181 ---HLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIW 240
H W C+ +E+ S GF + R ++D+ L + L + FE ++VL W +W
Sbjct: 1517 DVFHAIWCCRVNREVWKSTGFYGKIQRQGSEDVLAFLMRISTILSKEEFEFFLVLSWNLW 1576
Query: 241 YRRNEMRQGKEVSMA-NLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPPEADGFK 300
Y RN + G A + +W +L+ FR+S + D R RW PP D FK
Sbjct: 1577 YVRNSVNHGGHKPQACAILEWCSKFLSEFRESNTPKRD----RQVREAARWTPPGIDAFK 1636
Query: 301 VNVDAAFCRVSGTAGVGVVCRDSWGQV-GFAATAFYENIRDADFAEGLGAAVGLRLAVET 360
+NVDA +G A + V RD G V AAT +N+ AE A GL+ ++
Sbjct: 1637 INVDAGVRTEAGVASISSVVRDHAGMVHSAAATVLLQNMTPL-HAELQAIARGLQAGIQC 1696
Query: 361 ATRPFVLETDSMRVFKLLQRDRE---EVSELGMLVEDAVRGVPAGWFIGGNFTFREGNCV 420
F +E+D ++ L+QR E +V E+ + ++ V G +F +RE N V
Sbjct: 1697 NLPAFNVESDCLQAVTLVQRKEEGCRDVDEIVAHIRSLLQNVRVR---GVSFVYREANKV 1756
Query: 421 AHRLARLAMEDTCDRVWMEEGPSCVLGLLAEEGVHEFPQ 426
AH LA A+ + +W+ P C + + + P+
Sbjct: 1757 AHILANEALLNKASALWIGVVPPCASQAVMNDSPNPLPR 1785
BLAST of Lcy06g016400 vs. ExPASy TrEMBL
Match:
A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 5.1e-57
Identity = 140/443 (31.60%), Postives = 209/443 (47.18%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWN 60
+WGKK+++KG RWRIGNG V V W+P ++ +L V DL +G W+
Sbjct: 252 VWGKKIIQKGYRWRIGNGNSVRVLEDPWLPRPVTFKVYDKPSLPEGMYVVDLMKGNGEWD 311
Query: 61 ETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLARSPSS 120
E IR F+P +A IL +P + ED ++WH+ K+G YSV+SGYR+ L
Sbjct: 312 EEFIRAFFNPTDAELILGMPTSEWEIEDKILWHYSKNGEYSVRSGYRMAAA--LQVHDIQ 371
Query: 121 SSLELIHKWWNDCWNMRMPSKIKIFFWRMGESSL-------------------------- 180
S+ E +WW W +++P K+K F W+M S L
Sbjct: 372 SNTEATERWWRLLWKLKIPPKVKHFVWKMAHSWLPTNSALAYRKVQVEPYCTRCSSGAYE 431
Query: 181 ---HLFWHCKHTKEIMWSAGF-GAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAI 240
H W C+ E+ GF G I + K D + FL+R + D +E +++L W +
Sbjct: 432 NVFHALWGCRVNCEVWKLTGFHGRIKRQGKEDVLAFLMR-LSGMFSKDDWEFFLILSWNL 491
Query: 241 WYRRNEMRQ-GKEVSMANLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPPEADGF 300
WY RN + G + A + DW +L+ F+D G G +RA RW PP D F
Sbjct: 492 WYIRNSVNHGGHKPQAAAVVDWCGRFLSEFKD-GCGPKK---HGVARAEARWQPPMRDSF 551
Query: 301 KVNVDAAF-CRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVE 360
KVNVDA G V RD G+V A + AE + + GL+ +
Sbjct: 552 KVNVDAGVKVGGGGYTSFSSVVRDHTGRVCAANATVVRKVYSPLHAELVAISAGLQAGIH 611
Query: 361 TATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGG-NFTFREGNCVA 411
T F++ETD ++ L+Q++ E +L L+ ++ + +GG NF +RE N VA
Sbjct: 612 TRLPSFIVETDCLQAVNLVQQEEEGCRDLDGLIAH-IKCLLQDVRVGGINFVYREANQVA 671
BLAST of Lcy06g016400 vs. ExPASy TrEMBL
Match:
A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 5.3e-54
Identity = 139/453 (30.68%), Postives = 207/453 (45.70%), Query Frame = 0
Query: 2 WGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWNE 61
WGK+LL KG+RWR+GNG + VY W+P + +I SP L V DLFT+SG WN
Sbjct: 845 WGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNV 904
Query: 62 TLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVG--QGPLLARSPS 121
L++ F QE L IPL +A D +IWH+E++G+YSVKSGYR+ + ++ P
Sbjct: 905 PLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEP- 964
Query: 122 SSSLELIHKWWNDCWNMRMPSKIKIFFW----------------------------RMGE 181
S ++L K+W W +++P+KIK F W R E
Sbjct: 965 SVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAE 1024
Query: 182 SSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIW 241
S LH W C+ KE+ ++ +G + + + + L ++ + + L W +W
Sbjct: 1025 SVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLW 1084
Query: 242 YRRNE-MRQGKEVSMANLADWVVGYLNAFRDSGRGEMDLLG--GSPSRAVYRWAPPEADG 301
RRN + +GK + L + F ++ + G SP ++ W PP A
Sbjct: 1085 NRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGI 1144
Query: 302 FKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVE 361
+K+NVD A GVGVV R++ G+ A + A E + GLR A++
Sbjct: 1145 YKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVRRIQASYGARQTELMATIEGLRFAID 1204
Query: 362 TATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDA------VRGVPAGWFIGGNFTFRE 416
VLE D+ + E G+L+E+ R V W T R
Sbjct: 1205 MGFTAAVLEMDAQDCINSILSTEECNGIDGLLIEEVNYLLHNFRAVVCQW------TPRS 1264
BLAST of Lcy06g016400 vs. ExPASy TrEMBL
Match:
A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 4.5e-53
Identity = 129/441 (29.25%), Postives = 198/441 (44.90%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWN 60
+WGKK+++ G RWRIGNG V V W+P +I L + V DL +G W+
Sbjct: 1466 VWGKKIIQAGYRWRIGNGNSVRVLDDPWLPRPVTFKIYDKPPLPDNLHVIDLKKGNGEWD 1525
Query: 61 ETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLARSPSS 120
E +R F+P +A IL + + ED ++WH+ K G YSV+SGYR+ L
Sbjct: 1526 EEFVRAVFNPTDAELILQMATSECDIEDKILWHYSKDGEYSVRSGYRMAAA--LEVRDIQ 1585
Query: 121 SSLELIHKWWNDCWNMRMPSKIKIFFWRMG-----------------------------E 180
S+ E ++WW W +++P K+K F W+M E
Sbjct: 1586 SNTEATNRWWRQLWKLKIPPKVKHFVWKMAHSWIPTNSALAHRKVQIEPYCTRCSSGAYE 1645
Query: 181 SSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIW 240
+ H W C+ ++ +GF + + R +D+ L + L + FE ++VL W +W
Sbjct: 1646 NVFHALWSCRVNCDVWKISGFSSKIKRQGKEDVLAFLMRMSSSLAKEDFEYFLVLTWNLW 1705
Query: 241 YRRNEMRQG--KEVSMANLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPPEADGF 300
Y RN + G K V+ A + +W +L FRDS + +RA RW P +
Sbjct: 1706 YIRNSVNHGGHKPVAAA-IVEWCSKFLAEFRDSNVSQK----AGAARAAARWVAPVRGSY 1765
Query: 301 KVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVET 360
+NVDA G A V V RD G+V AA E AE A G++ ++
Sbjct: 1766 TINVDAGVKVGEGLASVSSVMRDHEGRVKVAAVRVVEKELSPLHAELTAIADGIKAGLQQ 1825
Query: 361 ATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAHR 411
F +ETD ++ L+ +D ++ LV + G +F +RE N AH
Sbjct: 1826 KLPSFHVETDCLQAVNLVLKDDGGCRDVDGLVTQIRCLLQDVRVHGISFVYREANQFAHV 1885
BLAST of Lcy06g016400 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 260.8 bits (665), Expect = 2.1e-65
Identity = 156/458 (34.06%), Postives = 225/458 (49.13%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFT-ASGHW 60
+WG+ LL+KG+RWRIGNG+ V +YG +WVP L+I S L +RV L G W
Sbjct: 705 LWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGW 764
Query: 61 NETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVG--QGPLLARS 120
++R F+P EA+ ILSIP+ + A ED +IW++EK+G+YSV+SGY+V P + ++
Sbjct: 765 QGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCV-QA 824
Query: 121 PSSSSLELIHKWWNDCWNMRMPSKIKIFFWRM---------------------------- 180
PSSSS E + WWN W M +P+KIK+F WR+
Sbjct: 825 PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRN 884
Query: 181 GESSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWA 240
GE S+HLFW CK + + ++ FG + +LR+ + L FEE V++W
Sbjct: 885 GEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVIWG 944
Query: 241 IWYRRNEMRQGKEVSMA-----NLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPP 300
+W +RN L +W Y FR++ + G + A W PP
Sbjct: 945 LWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSN--PITGRVTNTAEILWQPP 1004
Query: 301 EADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLR 360
+ +K+N DA+F AG+G++ + GQV AAT + ENI+ D AE + A GL+
Sbjct: 1005 DEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQ 1064
Query: 361 LAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGN 420
LA E P + E++SE G +V A NF REGN
Sbjct: 1065 LASEIGMHPAL----------------EDLSETGEIVLKAKNFWTQSLHASFNFVKREGN 1124
Query: 421 CVAHRLARLAMEDTCDRVWMEEGPSCVLGLLAEEGVHE 423
AH LAR A+ +WME+ P + L E + E
Sbjct: 1125 KAAHMLARRALLLHEFSIWMEDWPLELKSCLEMECLEE 1136
BLAST of Lcy06g016400 vs. NCBI nr
Match:
XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])
HSP 1 Score: 225.7 bits (574), Expect = 7.6e-55
Identity = 135/441 (30.61%), Postives = 211/441 (47.85%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWN 60
MWG+++++KG+RWRIGNG++++++ +W+P R P++L + V DL A W+
Sbjct: 947 MWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVVADLIKADNQWD 1006
Query: 61 ETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLARSPSS 120
E +RQHF + IL IPL ED V+WH++K G YSVKSGY++ L ++ P S
Sbjct: 1007 EIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLA---LRSKFPDS 1066
Query: 121 SS-LELIHKWWNDCWNMRMPSKIKIFFWRMGESSL------------------------- 180
+S E HK+W+ W + +P K+KIF WR + L
Sbjct: 1067 TSCTEASHKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPTCKRCKLSVE 1126
Query: 181 ---HLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIW 240
H CK ++I + F A + DI L+++ EL E V L W+ W
Sbjct: 1127 TISHALLECKAARKIWLQSPFSAPRLEANSQDIFSTLQNMAKELRKSDLELMVALCWSAW 1186
Query: 241 YRRNE-MRQGKEVSMANLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPPEADGFK 300
Y RN+ + G+E++ A L AF+ + + + S W PP + FK
Sbjct: 1187 YARNKCIFDGRELNPIISAAKAESVLTAFQRVRKPQQSHISISIKEKQQEWLPPPQNVFK 1246
Query: 301 VNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENI--RDADFAEGLGAAVGLRLAVE 360
VNVDAAF + +AGVG V RDS G++ A +N+ A AE GL+LA
Sbjct: 1247 VNVDAAFNSKNLSAGVGAVIRDSNGKI--VAAGVNQNLLKGSASLAEAEAVLWGLQLARN 1306
Query: 361 TATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAH 410
++E+D + V +L+ + SE+ + + + N R N AH
Sbjct: 1307 ADVSSLIIESDCLEVVQLVNNTKGSRSEIFWTILAIQNQMKIFQKVVVNHIPRHCNACAH 1366
BLAST of Lcy06g016400 vs. NCBI nr
Match:
VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])
HSP 1 Score: 221.9 bits (564), Expect = 1.1e-53
Identity = 139/453 (30.68%), Postives = 207/453 (45.70%), Query Frame = 0
Query: 2 WGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWNE 61
WGK+LL KG+RWR+GNG + VY W+P + +I SP L V DLFT+SG WN
Sbjct: 845 WGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNV 904
Query: 62 TLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVG--QGPLLARSPS 121
L++ F QE L IPL +A D +IWH+E++G+YSVKSGYR+ + ++ P
Sbjct: 905 PLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEP- 964
Query: 122 SSSLELIHKWWNDCWNMRMPSKIKIFFW----------------------------RMGE 181
S ++L K+W W +++P+KIK F W R E
Sbjct: 965 SVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAE 1024
Query: 182 SSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIW 241
S LH W C+ KE+ ++ +G + + + + L ++ + + L W +W
Sbjct: 1025 SVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLW 1084
Query: 242 YRRNE-MRQGKEVSMANLADWVVGYLNAFRDSGRGEMDLLG--GSPSRAVYRWAPPEADG 301
RRN + +GK + L + F ++ + G SP ++ W PP A
Sbjct: 1085 NRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGI 1144
Query: 302 FKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVE 361
+K+NVD A GVGVV R++ G+ A + A E + GLR A++
Sbjct: 1145 YKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVRRIQASYGARQTELMATIEGLRFAID 1204
Query: 362 TATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDA------VRGVPAGWFIGGNFTFRE 416
VLE D+ + E G+L+E+ R V W T R
Sbjct: 1205 MGFTAAVLEMDAQDCINSILSTEECNGIDGLLIEEVNYLLHNFRAVVCQW------TPRS 1264
BLAST of Lcy06g016400 vs. NCBI nr
Match:
XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])
HSP 1 Score: 215.7 bits (548), Expect = 7.8e-52
Identity = 132/443 (29.80%), Postives = 203/443 (45.82%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASGHWN 60
+WG+++L KG RWRIGNG+ V VYG++W+P T + S ++ D V +L W
Sbjct: 711 VWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQWR 770
Query: 61 ETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLARSPSS 120
E LI QHF P++A I+ IPL + ED +IWH++K G YSVKSGY+V PS
Sbjct: 771 EDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQVAMRIKFPEDPSC 830
Query: 121 SSLELIHKWWNDCWNMRMPSKIKIFFWRMG----------------------------ES 180
S+ + W W + +P K+KIF WR E+
Sbjct: 831 SNHD--QNLWRFIWKLAIPEKVKIFLWRAAHDLLPTAENLWKKKVLQEPMCQSCHCHVET 890
Query: 181 SLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIWY 240
H C ++I + L DI ++L+ + E LLWAIW
Sbjct: 891 VSHALVECNRARKIWRYSNLAEELRGVYRCDIVWMLQFWPRQHAKVEGAEVAALLWAIWK 950
Query: 241 RRNE-MRQGKEVSMANLADWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWAPPEADGFKV 300
RN+ + +GK+ + + + +F+ + EM + +W+PP KV
Sbjct: 951 ARNKWLFEGKKENPLRVVANAEAIVESFKKIRQPEMVYKTKGNAERQKQWSPPPNGWQKV 1010
Query: 301 NVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVETAT 360
NVDAA + AG+GVV RDS G AA AE GL++A +
Sbjct: 1011 NVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEATAMEWGLKVAEKAHI 1070
Query: 361 RPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAHRLA 415
+ E+DS+ V L+ + ++E+G L+ D + + R+ N AH LA
Sbjct: 1071 TFGIFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQNFKAQHSPRDCNYAAHSLA 1130
BLAST of Lcy06g016400 vs. NCBI nr
Match:
XP_024157591.1 (uncharacterized protein LOC112165325 [Rosa chinensis])
HSP 1 Score: 215.3 bits (547), Expect = 1.0e-51
Identity = 140/448 (31.25%), Postives = 199/448 (44.42%), Query Frame = 0
Query: 1 MWGKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPM---TLQPDARVRDLFTASG 60
MWGK++++ G RWRIG+G RVSV W+PC + ++ SP+ TL +V LFT +G
Sbjct: 757 MWGKQVIDMGTRWRIGDGRRVSVLADKWLPCPVSFKVVSPIPLTTLTMQHKVESLFTETG 816
Query: 61 HWNETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRVGQGPLLAR- 120
WN LI+ F EA IL +PL D ++WHF K+G Y+VKSGY V + +L +
Sbjct: 817 AWNVPLIQSWFLSHEAEMILGMPLGLRNVPDKLVWHFSKNGSYNVKSGYWVARDMMLRQR 876
Query: 121 -SPSSSSLELIHKWWNDCWNMRMPSKIKIFFWRM-------------------------- 180
+ SS K W W + P KIK+F WR
Sbjct: 877 GDTAGSSTNECKKVWEKIWGVHAPHKIKVFMWRAMKGFLPCAANLKQKKVLEDSRCWQCG 936
Query: 181 --GESSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEWVVLL 240
ES +H W C K+ + R + L+ + E +
Sbjct: 937 WHSESVMHALWDCPTAKKTWKKTFLHGVCKRWQVPTFLDLVHHICPTASATELETFCFTA 996
Query: 241 WAIWYRRN----EMRQGKEVSMANLA-DWVVGYLNAFRDSGRGEMDLLGGSPSRAVYRWA 300
W IW RN E + K V +A LA +W + N G LG + W
Sbjct: 997 WWIWRNRNLTRFEEKNLKPVEVARLAMEWQNEFANL---GGLKHKSTLGAVHAHVC--WK 1056
Query: 301 PPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQV-GFAATAFYENIRDADFAEGLGAAV 360
PP+ K+N D A +G G+GVV RD+ G + G A NI E L
Sbjct: 1057 PPQLGHLKMNFDGAHDGKNGVCGLGVVFRDTQGNLKGAMAVPQIGNIAPRSI-EALALLH 1116
Query: 361 GLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFR 410
GLR A+ +E D++ V LQ + E+ S G L+++ V + +F R
Sbjct: 1117 GLRFALHVGFTMIEIEGDALSVINALQENSEDYSAEGHLIDEVKFLVQSFTSCSSHFVKR 1176
BLAST of Lcy06g016400 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 67.8 bits (164), Expect = 2.5e-11
Identity = 76/356 (21.35%), Postives = 139/356 (39.04%), Query Frame = 0
Query: 3 GKKLLEKGVRWRIGNGERVSVYGSSWVPCDTNLRIASPMTLQPDARVRDLFTASG---HW 62
G LL+KG R IG+G+ + + + V + + T + + + +LF G W
Sbjct: 30 GIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPLNTEETYK-EMTINNLFERKGSYYFW 89
Query: 63 NETLIRQHFSPQEARYILSIPLRQVACEDVVIWHFEKSGLYSVKSGYRV----GQGPLLA 122
+++ I Q + +I I L + D +IW++ +G Y+V+SGY + + A
Sbjct: 90 DDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPA 149
Query: 123 RSPSSSSLELIHKWWNDCWNMRMPSKIKIFFWRM-------------------------- 182
+P S++L + WN+ + K+K F WR
Sbjct: 150 INPPHGSIDLKTR----IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCH 209
Query: 183 --GESSLHLFWHCKHTKEIMWSAGFGAILSRCKADDIKFLLRDVKDELEWDRFEEW---- 242
ES H + C + I ++ ++D + + ++ + ++ ++
Sbjct: 210 RENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLL 269
Query: 243 -VVLLWAIWYRR-----NEMRQGKEVSMANLADWVVGYLNAFRDSGRGEMDLLGGSPSRA 302
V L+W IW R N+ R+ ++ + +LNA + + SP+R
Sbjct: 270 PVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTP------SPTRQ 329
Query: 303 V----YRWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRD------SWGQVGFAATA 304
+ W P A K N DA F A G + R+ SWG + A T+
Sbjct: 330 IAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTS 374
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DAR4 | 1.0e-65 | 34.06 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A803P3X4 | 1.0e-57 | 30.50 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PM68 | 5.1e-57 | 31.60 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A5E4FZN9 | 5.3e-54 | 30.68 | PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1 | [more] |
A0A803PV25 | 4.5e-53 | 29.25 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 2.5e-11 | 21.35 | Ribonuclease H-like superfamily protein | [more] |